data_9FXV # _model_server_result.job_id fLh_rRGPEVoGKWCLx9Bm0Q _model_server_result.datetime_utc '2025-07-23 00:51:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fxv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 9FXV # _exptl.entry_id 9FXV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FXV _cell.length_a 37.857 _cell.length_b 119.561 _cell.length_c 123.281 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FXV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C TYR 5 B TYR 5 1_555 B N NLE 6 B NLE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? covale ? covale2 B C NLE 6 B NLE 6 1_555 B N LEU 7 B LEU 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.41 ? covale ? covale3 B C TYR 8 B TYR 8 1_555 B N NLE 9 B NLE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? covale ? covale4 B C NLE 9 B NLE 9 1_555 B N LYS 10 B LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 267 n n O1 HO1 PG4 sing 268 n n C1 C2 PG4 sing 269 n n C1 H11 PG4 sing 270 n n C1 H12 PG4 sing 271 n n C2 O2 PG4 sing 272 n n C2 H21 PG4 sing 273 n n C2 H22 PG4 sing 274 n n O2 C3 PG4 sing 275 n n C3 C4 PG4 sing 276 n n C3 H31 PG4 sing 277 n n C3 H32 PG4 sing 278 n n C4 O3 PG4 sing 279 n n C4 H41 PG4 sing 280 n n C4 H42 PG4 sing 281 n n O3 C5 PG4 sing 282 n n C5 C6 PG4 sing 283 n n C5 H51 PG4 sing 284 n n C5 H52 PG4 sing 285 n n C6 O4 PG4 sing 286 n n C6 H61 PG4 sing 287 n n C6 H62 PG4 sing 288 n n O4 C7 PG4 sing 289 n n C7 C8 PG4 sing 290 n n C7 H71 PG4 sing 291 n n C7 H72 PG4 sing 292 n n C8 O5 PG4 sing 293 n n C8 H81 PG4 sing 294 n n C8 H82 PG4 sing 295 n n O5 HO5 PG4 sing 296 n n # _atom_sites.entry_id 9FXV _atom_sites.fract_transf_matrix[1][1] 0.026415 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 801 1 EDO EDO . D 4 PG4 A 1 802 2 PG4 PG4 . E 5 HOH A 1 901 180 HOH HOH . E 5 HOH A 2 902 154 HOH HOH . E 5 HOH A 3 903 139 HOH HOH . E 5 HOH A 4 904 165 HOH HOH . E 5 HOH A 5 905 22 HOH HOH . E 5 HOH A 6 906 107 HOH HOH . E 5 HOH A 7 907 43 HOH HOH . E 5 HOH A 8 908 70 HOH HOH . E 5 HOH A 9 909 46 HOH HOH . E 5 HOH A 10 910 65 HOH HOH . E 5 HOH A 11 911 4 HOH HOH . E 5 HOH A 12 912 88 HOH HOH . E 5 HOH A 13 913 191 HOH HOH . E 5 HOH A 14 914 120 HOH HOH . E 5 HOH A 15 915 26 HOH HOH . E 5 HOH A 16 916 15 HOH HOH . E 5 HOH A 17 917 34 HOH HOH . E 5 HOH A 18 918 104 HOH HOH . E 5 HOH A 19 919 16 HOH HOH . E 5 HOH A 20 920 90 HOH HOH . E 5 HOH A 21 921 97 HOH HOH . E 5 HOH A 22 922 151 HOH HOH . E 5 HOH A 23 923 17 HOH HOH . E 5 HOH A 24 924 35 HOH HOH . E 5 HOH A 25 925 18 HOH HOH . E 5 HOH A 26 926 80 HOH HOH . E 5 HOH A 27 927 113 HOH HOH . E 5 HOH A 28 928 7 HOH HOH . E 5 HOH A 29 929 178 HOH HOH . E 5 HOH A 30 930 72 HOH HOH . E 5 HOH A 31 931 212 HOH HOH . E 5 HOH A 32 932 185 HOH HOH . E 5 HOH A 33 933 42 HOH HOH . E 5 HOH A 34 934 54 HOH HOH . E 5 HOH A 35 935 57 HOH HOH . E 5 HOH A 36 936 195 HOH HOH . E 5 HOH A 37 937 2 HOH HOH . E 5 HOH A 38 938 158 HOH HOH . E 5 HOH A 39 939 145 HOH HOH . E 5 HOH A 40 940 189 HOH HOH . E 5 HOH A 41 941 91 HOH HOH . E 5 HOH A 42 942 60 HOH HOH . E 5 HOH A 43 943 200 HOH HOH . E 5 HOH A 44 944 155 HOH HOH . E 5 HOH A 45 945 169 HOH HOH . E 5 HOH A 46 946 152 HOH HOH . E 5 HOH A 47 947 1 HOH HOH . E 5 HOH A 48 948 5 HOH HOH . E 5 HOH A 49 949 20 HOH HOH . E 5 HOH A 50 950 79 HOH HOH . E 5 HOH A 51 951 133 HOH HOH . E 5 HOH A 52 952 41 HOH HOH . E 5 HOH A 53 953 89 HOH HOH . E 5 HOH A 54 954 203 HOH HOH . E 5 HOH A 55 955 62 HOH HOH . E 5 HOH A 56 956 159 HOH HOH . E 5 HOH A 57 957 27 HOH HOH . E 5 HOH A 58 958 12 HOH HOH . E 5 HOH A 59 959 197 HOH HOH . E 5 HOH A 60 960 49 HOH HOH . E 5 HOH A 61 961 174 HOH HOH . E 5 HOH A 62 962 105 HOH HOH . E 5 HOH A 63 963 204 HOH HOH . E 5 HOH A 64 964 36 HOH HOH . E 5 HOH A 65 965 198 HOH HOH . E 5 HOH A 66 966 184 HOH HOH . E 5 HOH A 67 967 19 HOH HOH . E 5 HOH A 68 968 94 HOH HOH . E 5 HOH A 69 969 56 HOH HOH . E 5 HOH A 70 970 106 HOH HOH . E 5 HOH A 71 971 98 HOH HOH . E 5 HOH A 72 972 179 HOH HOH . E 5 HOH A 73 973 196 HOH HOH . E 5 HOH A 74 974 129 HOH HOH . E 5 HOH A 75 975 146 HOH HOH . E 5 HOH A 76 976 77 HOH HOH . E 5 HOH A 77 977 201 HOH HOH . E 5 HOH A 78 978 137 HOH HOH . E 5 HOH A 79 979 3 HOH HOH . E 5 HOH A 80 980 172 HOH HOH . E 5 HOH A 81 981 30 HOH HOH . E 5 HOH A 82 982 13 HOH HOH . E 5 HOH A 83 983 101 HOH HOH . E 5 HOH A 84 984 176 HOH HOH . E 5 HOH A 85 985 58 HOH HOH . E 5 HOH A 86 986 126 HOH HOH . E 5 HOH A 87 987 63 HOH HOH . E 5 HOH A 88 988 59 HOH HOH . E 5 HOH A 89 989 66 HOH HOH . E 5 HOH A 90 990 199 HOH HOH . E 5 HOH A 91 991 118 HOH HOH . E 5 HOH A 92 992 135 HOH HOH . E 5 HOH A 93 993 167 HOH HOH . E 5 HOH A 94 994 23 HOH HOH . E 5 HOH A 95 995 95 HOH HOH . E 5 HOH A 96 996 207 HOH HOH . E 5 HOH A 97 997 64 HOH HOH . E 5 HOH A 98 998 75 HOH HOH . E 5 HOH A 99 999 143 HOH HOH . E 5 HOH A 100 1000 37 HOH HOH . E 5 HOH A 101 1001 100 HOH HOH . E 5 HOH A 102 1002 142 HOH HOH . E 5 HOH A 103 1003 8 HOH HOH . E 5 HOH A 104 1004 192 HOH HOH . E 5 HOH A 105 1005 82 HOH HOH . E 5 HOH A 106 1006 53 HOH HOH . E 5 HOH A 107 1007 9 HOH HOH . E 5 HOH A 108 1008 127 HOH HOH . E 5 HOH A 109 1009 6 HOH HOH . E 5 HOH A 110 1010 186 HOH HOH . E 5 HOH A 111 1011 74 HOH HOH . E 5 HOH A 112 1012 11 HOH HOH . E 5 HOH A 113 1013 109 HOH HOH . E 5 HOH A 114 1014 116 HOH HOH . E 5 HOH A 115 1015 161 HOH HOH . E 5 HOH A 116 1016 130 HOH HOH . E 5 HOH A 117 1017 149 HOH HOH . E 5 HOH A 118 1018 50 HOH HOH . E 5 HOH A 119 1019 115 HOH HOH . E 5 HOH A 120 1020 96 HOH HOH . E 5 HOH A 121 1021 103 HOH HOH . E 5 HOH A 122 1022 38 HOH HOH . E 5 HOH A 123 1023 111 HOH HOH . E 5 HOH A 124 1024 187 HOH HOH . E 5 HOH A 125 1025 47 HOH HOH . E 5 HOH A 126 1026 177 HOH HOH . E 5 HOH A 127 1027 44 HOH HOH . E 5 HOH A 128 1028 136 HOH HOH . E 5 HOH A 129 1029 39 HOH HOH . E 5 HOH A 130 1030 121 HOH HOH . E 5 HOH A 131 1031 86 HOH HOH . E 5 HOH A 132 1032 52 HOH HOH . E 5 HOH A 133 1033 31 HOH HOH . E 5 HOH A 134 1034 188 HOH HOH . E 5 HOH A 135 1035 208 HOH HOH . E 5 HOH A 136 1036 102 HOH HOH . E 5 HOH A 137 1037 131 HOH HOH . E 5 HOH A 138 1038 25 HOH HOH . E 5 HOH A 139 1039 99 HOH HOH . E 5 HOH A 140 1040 61 HOH HOH . E 5 HOH A 141 1041 175 HOH HOH . E 5 HOH A 142 1042 210 HOH HOH . E 5 HOH A 143 1043 114 HOH HOH . E 5 HOH A 144 1044 69 HOH HOH . E 5 HOH A 145 1045 32 HOH HOH . E 5 HOH A 146 1046 166 HOH HOH . E 5 HOH A 147 1047 10 HOH HOH . E 5 HOH A 148 1048 168 HOH HOH . E 5 HOH A 149 1049 193 HOH HOH . E 5 HOH A 150 1050 123 HOH HOH . E 5 HOH A 151 1051 93 HOH HOH . E 5 HOH A 152 1052 110 HOH HOH . E 5 HOH A 153 1053 84 HOH HOH . E 5 HOH A 154 1054 181 HOH HOH . E 5 HOH A 155 1055 24 HOH HOH . E 5 HOH A 156 1056 171 HOH HOH . E 5 HOH A 157 1057 76 HOH HOH . E 5 HOH A 158 1058 209 HOH HOH . E 5 HOH A 159 1059 29 HOH HOH . E 5 HOH A 160 1060 108 HOH HOH . E 5 HOH A 161 1061 141 HOH HOH . E 5 HOH A 162 1062 92 HOH HOH . E 5 HOH A 163 1063 67 HOH HOH . E 5 HOH A 164 1064 71 HOH HOH . E 5 HOH A 165 1065 87 HOH HOH . E 5 HOH A 166 1066 173 HOH HOH . E 5 HOH A 167 1067 156 HOH HOH . E 5 HOH A 168 1068 202 HOH HOH . E 5 HOH A 169 1069 45 HOH HOH . E 5 HOH A 170 1070 81 HOH HOH . E 5 HOH A 171 1071 124 HOH HOH . E 5 HOH A 172 1072 134 HOH HOH . E 5 HOH A 173 1073 190 HOH HOH . E 5 HOH A 174 1074 125 HOH HOH . E 5 HOH A 175 1075 73 HOH HOH . E 5 HOH A 176 1076 148 HOH HOH . E 5 HOH A 177 1077 138 HOH HOH . E 5 HOH A 178 1078 40 HOH HOH . E 5 HOH A 179 1079 194 HOH HOH . E 5 HOH A 180 1080 78 HOH HOH . E 5 HOH A 181 1081 162 HOH HOH . E 5 HOH A 182 1082 170 HOH HOH . E 5 HOH A 183 1083 112 HOH HOH . E 5 HOH A 184 1084 132 HOH HOH . E 5 HOH A 185 1085 144 HOH HOH . E 5 HOH A 186 1086 183 HOH HOH . E 5 HOH A 187 1087 206 HOH HOH . E 5 HOH A 188 1088 157 HOH HOH . E 5 HOH A 189 1089 51 HOH HOH . E 5 HOH A 190 1090 117 HOH HOH . E 5 HOH A 191 1091 122 HOH HOH . E 5 HOH A 192 1092 14 HOH HOH . E 5 HOH A 193 1093 33 HOH HOH . E 5 HOH A 194 1094 150 HOH HOH . E 5 HOH A 195 1095 119 HOH HOH . E 5 HOH A 196 1096 83 HOH HOH . E 5 HOH A 197 1097 211 HOH HOH . E 5 HOH A 198 1098 55 HOH HOH . E 5 HOH A 199 1099 182 HOH HOH . E 5 HOH A 200 1100 140 HOH HOH . E 5 HOH A 201 1101 128 HOH HOH . E 5 HOH A 202 1102 28 HOH HOH . E 5 HOH A 203 1103 205 HOH HOH . E 5 HOH A 204 1104 21 HOH HOH . E 5 HOH A 205 1105 48 HOH HOH . E 5 HOH A 206 1106 160 HOH HOH . F 5 HOH B 1 101 163 HOH HOH . F 5 HOH B 2 102 85 HOH HOH . F 5 HOH B 3 103 164 HOH HOH . F 5 HOH B 4 104 147 HOH HOH . F 5 HOH B 5 105 68 HOH HOH . F 5 HOH B 6 106 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 4 5.576 -11.722 53.61 1 78.26 ? O1 PG4 802 A 1 HETATM 2 C C1 PG4 . . . D 4 5.819 -11.398 52.242 1 69.19 ? C1 PG4 802 A 1 HETATM 3 C C2 PG4 . . . D 4 7.255 -11.386 51.881 1 66.69 ? C2 PG4 802 A 1 HETATM 4 O O2 PG4 . . . D 4 7.985 -10.517 52.732 1 79.85 ? O2 PG4 802 A 1 HETATM 5 C C3 PG4 . . . D 4 9.003 -9.774 52.061 1 79.64 ? C3 PG4 802 A 1 HETATM 6 C C4 PG4 . . . D 4 8.519 -8.368 51.838 1 82.17 ? C4 PG4 802 A 1 HETATM 7 O O3 PG4 . . . D 4 8.61 -7.619 53.047 1 75.6 ? O3 PG4 802 A 1 HETATM 8 C C5 PG4 . . . D 4 8.178 -6.261 52.934 1 73.65 ? C5 PG4 802 A 1 HETATM 9 C C6 PG4 . . . D 4 6.693 -6.233 53.031 1 76.34 ? C6 PG4 802 A 1 HETATM 10 O O4 PG4 . . . D 4 6.216 -4.906 53.163 1 80.29 ? O4 PG4 802 A 1 HETATM 11 C C7 PG4 . . . D 4 4.795 -4.829 53.186 1 78.48 ? C7 PG4 802 A 1 HETATM 12 C C8 PG4 . . . D 4 4.309 -3.761 52.231 1 85.16 ? C8 PG4 802 A 1 HETATM 13 O O5 PG4 . . . D 4 4.789 -2.449 52.545 1 79.31 ? O5 PG4 802 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #