data_9FZH # _model_server_result.job_id 7kteYKIb01rYSoYno4F7Pw _model_server_result.datetime_utc '2025-06-21 12:48:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9fzh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 9FZH # _exptl.entry_id 9FZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 694.968 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(1-adamantyl)-~{N}-[7-[1-(phenylmethyl)-5-[(2,4,6-trimethylphenyl)sulfonylamino]benzimidazol-2-yl]heptyl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9FZH _cell.length_a 90.77 _cell.length_b 90.77 _cell.length_c 87.33 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9FZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C42 H54 N4 O3 S' _chem_comp.formula_weight 694.968 _chem_comp.id A1IHB _chem_comp.mon_nstd_flag . _chem_comp.name 2-(1-adamantyl)-~{N}-[7-[1-(phenylmethyl)-5-[(2,4,6-trimethylphenyl)sulfonylamino]benzimidazol-2-yl]heptyl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 A1IHB sing 1 n n C1 C2 A1IHB doub 2 n y C2 C3 A1IHB sing 3 n y C4 C3 A1IHB sing 4 n n C3 C5 A1IHB doub 5 n y C6 C5 A1IHB sing 6 n y C7 C6 A1IHB sing 7 n n C8 C6 A1IHB doub 8 n y C1 C8 A1IHB sing 9 n y C5 S A1IHB sing 10 n n O S A1IHB doub 11 n n O1 S A1IHB doub 12 n n S N A1IHB sing 13 n n N C9 A1IHB sing 14 n n C9 C10 A1IHB doub 15 n y C10 C11 A1IHB sing 16 n y C11 C12 A1IHB doub 17 n y C13 C12 A1IHB sing 18 n y C14 C13 A1IHB doub 19 n y C9 C14 A1IHB sing 20 n y C12 N1 A1IHB sing 21 n y C15 N1 A1IHB sing 22 n n C16 C15 A1IHB sing 23 n n C16 C17 A1IHB doub 24 n y C17 C18 A1IHB sing 25 n y C18 C19 A1IHB doub 26 n y C19 C20 A1IHB sing 27 n y C20 C21 A1IHB doub 28 n y C21 C16 A1IHB sing 29 n y N1 C22 A1IHB sing 30 n y C22 C23 A1IHB sing 31 n n C23 C24 A1IHB sing 32 n n C24 C25 A1IHB sing 33 n n C25 C26 A1IHB sing 34 n n C26 C27 A1IHB sing 35 n n C27 C28 A1IHB sing 36 n n C28 C29 A1IHB sing 37 n n C29 N2 A1IHB sing 38 n n N2 C30 A1IHB sing 39 n n C30 O2 A1IHB doub 40 n n C31 C30 A1IHB sing 41 n n C32 C31 A1IHB sing 42 n n C32 C33 A1IHB sing 43 n n C33 C34 A1IHB sing 44 n n C34 C35 A1IHB sing 45 n n C35 C36 A1IHB sing 46 n n C37 C36 A1IHB sing 47 n n C38 C37 A1IHB sing 48 n n C39 C38 A1IHB sing 49 n n C34 C39 A1IHB sing 50 n n C40 C38 A1IHB sing 51 n n C32 C40 A1IHB sing 52 n n C36 C41 A1IHB sing 53 n n C41 C32 A1IHB sing 54 n n N3 C22 A1IHB doub 55 n y C11 N3 A1IHB sing 56 n y C7 H7 A1IHB sing 57 n n C7 H8 A1IHB sing 58 n n C7 H9 A1IHB sing 59 n n C8 H10 A1IHB sing 60 n n N2 H36 A1IHB sing 61 n n C4 H6 A1IHB sing 62 n n C4 H4 A1IHB sing 63 n n C4 H5 A1IHB sing 64 n n C2 H3 A1IHB sing 65 n n N H11 A1IHB sing 66 n n C H1 A1IHB sing 67 n n C H2 A1IHB sing 68 n n C H A1IHB sing 69 n n C10 H12 A1IHB sing 70 n n C13 H13 A1IHB sing 71 n n C14 H14 A1IHB sing 72 n n C15 H15 A1IHB sing 73 n n C15 H16 A1IHB sing 74 n n C17 H17 A1IHB sing 75 n n C18 H18 A1IHB sing 76 n n C19 H19 A1IHB sing 77 n n C20 H20 A1IHB sing 78 n n C21 H21 A1IHB sing 79 n n C23 H22 A1IHB sing 80 n n C23 H23 A1IHB sing 81 n n C24 H25 A1IHB sing 82 n n C24 H24 A1IHB sing 83 n n C25 H27 A1IHB sing 84 n n C25 H26 A1IHB sing 85 n n C26 H28 A1IHB sing 86 n n C26 H29 A1IHB sing 87 n n C27 H31 A1IHB sing 88 n n C27 H30 A1IHB sing 89 n n C28 H33 A1IHB sing 90 n n C28 H32 A1IHB sing 91 n n C29 H35 A1IHB sing 92 n n C29 H34 A1IHB sing 93 n n C31 H38 A1IHB sing 94 n n C31 H37 A1IHB sing 95 n n C33 H39 A1IHB sing 96 n n C33 H40 A1IHB sing 97 n n C34 H41 A1IHB sing 98 n n C35 H42 A1IHB sing 99 n n C35 H43 A1IHB sing 100 n n C36 H44 A1IHB sing 101 n n C37 H45 A1IHB sing 102 n n C37 H46 A1IHB sing 103 n n C38 H47 A1IHB sing 104 n n C39 H49 A1IHB sing 105 n n C39 H48 A1IHB sing 106 n n C40 H50 A1IHB sing 107 n n C40 H51 A1IHB sing 108 n n C41 H52 A1IHB sing 109 n n C41 H53 A1IHB sing 110 n n # _atom_sites.entry_id 9FZH _atom_sites.fract_transf_matrix[1][1] 0.011017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1IHB A 1 501 1 A1IHB XXX . C 3 HOH A 1 601 8 HOH HOH . C 3 HOH A 2 602 21 HOH HOH . C 3 HOH A 3 603 4 HOH HOH . C 3 HOH A 4 604 61 HOH HOH . C 3 HOH A 5 605 12 HOH HOH . C 3 HOH A 6 606 11 HOH HOH . C 3 HOH A 7 607 33 HOH HOH . C 3 HOH A 8 608 68 HOH HOH . C 3 HOH A 9 609 7 HOH HOH . C 3 HOH A 10 610 18 HOH HOH . C 3 HOH A 11 611 34 HOH HOH . C 3 HOH A 12 612 31 HOH HOH . C 3 HOH A 13 613 63 HOH HOH . C 3 HOH A 14 614 28 HOH HOH . C 3 HOH A 15 615 5 HOH HOH . C 3 HOH A 16 616 6 HOH HOH . C 3 HOH A 17 617 19 HOH HOH . C 3 HOH A 18 618 10 HOH HOH . C 3 HOH A 19 619 70 HOH HOH . C 3 HOH A 20 620 29 HOH HOH . C 3 HOH A 21 621 3 HOH HOH . C 3 HOH A 22 622 56 HOH HOH . C 3 HOH A 23 623 38 HOH HOH . C 3 HOH A 24 624 24 HOH HOH . C 3 HOH A 25 625 57 HOH HOH . C 3 HOH A 26 626 1 HOH HOH . C 3 HOH A 27 627 9 HOH HOH . C 3 HOH A 28 628 15 HOH HOH . C 3 HOH A 29 629 71 HOH HOH . C 3 HOH A 30 630 58 HOH HOH . C 3 HOH A 31 631 65 HOH HOH . C 3 HOH A 32 632 37 HOH HOH . C 3 HOH A 33 633 42 HOH HOH . C 3 HOH A 34 634 13 HOH HOH . C 3 HOH A 35 635 26 HOH HOH . C 3 HOH A 36 636 23 HOH HOH . C 3 HOH A 37 637 17 HOH HOH . C 3 HOH A 38 638 54 HOH HOH . C 3 HOH A 39 639 14 HOH HOH . C 3 HOH A 40 640 2 HOH HOH . C 3 HOH A 41 641 69 HOH HOH . C 3 HOH A 42 642 66 HOH HOH . C 3 HOH A 43 643 55 HOH HOH . C 3 HOH A 44 644 62 HOH HOH . C 3 HOH A 45 645 67 HOH HOH . C 3 HOH A 46 646 20 HOH HOH . C 3 HOH A 47 647 59 HOH HOH . C 3 HOH A 48 648 64 HOH HOH . C 3 HOH A 49 649 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1IHB . . . B 2 10.456 71.855 -1.617 1 50.19 ? N1 A1IHB 501 A 1 HETATM 2 C C7 A1IHB . . . B 2 8.59 78.065 3.254 1 49.96 ? C7 A1IHB 501 A 1 HETATM 3 C C8 A1IHB . . . B 2 10.157 79.377 1.88 1 48.33 ? C8 A1IHB 501 A 1 HETATM 4 N N2 A1IHB . . . B 2 16.308 75.837 0.57 1 63.85 ? N2 A1IHB 501 A 1 HETATM 5 C C9 A1IHB . . . B 2 7.985 75.103 -0.999 1 54.75 ? C9 A1IHB 501 A 1 HETATM 6 O O1 A1IHB . . . B 2 6.992 76.296 1.734 1 69.29 ? O1 A1IHB 501 A 1 HETATM 7 C C1 A1IHB . . . B 2 10.597 80.01 0.728 1 56.01 ? C1 A1IHB 501 A 1 HETATM 8 C C5 A1IHB . . . B 2 8.386 78.287 0.67 1 57.54 ? C5 A1IHB 501 A 1 HETATM 9 C C6 A1IHB . . . B 2 9.047 78.54 1.897 1 52.46 ? C6 A1IHB 501 A 1 HETATM 10 N N3 A1IHB . . . B 2 11.069 73.23 0.043 1 47.2 ? N3 A1IHB 501 A 1 HETATM 11 C C4 A1IHB . . . B 2 8.14 78.793 -1.863 1 47.03 ? C4 A1IHB 501 A 1 HETATM 12 C C3 A1IHB . . . B 2 8.825 78.905 -0.526 1 47.02 ? C3 A1IHB 501 A 1 HETATM 13 C C2 A1IHB . . . B 2 9.93 79.746 -0.459 1 46.53 ? C2 A1IHB 501 A 1 HETATM 14 N N A1IHB . . . B 2 7.142 76.236 -0.707 1 56.44 ? N A1IHB 501 A 1 HETATM 15 C C A1IHB . . . B 2 11.695 81.045 0.789 1 53.73 ? C A1IHB 501 A 1 HETATM 16 O O A1IHB . . . B 2 5.778 77.982 0.404 1 44.96 ? O A1IHB 501 A 1 HETATM 17 C C10 A1IHB . . . B 2 9.146 74.856 -0.263 1 48.62 ? C10 A1IHB 501 A 1 HETATM 18 C C11 A1IHB . . . B 2 9.917 73.731 -0.57 1 48.63 ? C11 A1IHB 501 A 1 HETATM 19 C C12 A1IHB . . . B 2 9.522 72.892 -1.606 1 49.43 ? C12 A1IHB 501 A 1 HETATM 20 C C13 A1IHB . . . B 2 8.38 73.133 -2.353 1 43.87 ? C13 A1IHB 501 A 1 HETATM 21 C C14 A1IHB . . . B 2 7.611 74.243 -2.039 1 50.36 ? C14 A1IHB 501 A 1 HETATM 22 C C15 A1IHB . . . B 2 10.455 70.725 -2.559 1 42.06 ? C15 A1IHB 501 A 1 HETATM 23 C C16 A1IHB . . . B 2 10.636 71.148 -3.997 1 43.35 ? C16 A1IHB 501 A 1 HETATM 24 C C17 A1IHB . . . B 2 11.646 72.031 -4.354 1 45.76 ? C17 A1IHB 501 A 1 HETATM 25 C C18 A1IHB . . . B 2 11.733 72.524 -5.648 1 40.55 ? C18 A1IHB 501 A 1 HETATM 26 C C19 A1IHB . . . B 2 10.824 72.124 -6.606 1 36.95 ? C19 A1IHB 501 A 1 HETATM 27 C C20 A1IHB . . . B 2 9.833 71.222 -6.272 1 42.76 ? C20 A1IHB 501 A 1 HETATM 28 C C21 A1IHB . . . B 2 9.739 70.738 -4.976 1 47.22 ? C21 A1IHB 501 A 1 HETATM 29 C C22 A1IHB . . . B 2 11.336 72.106 -0.592 1 45.92 ? C22 A1IHB 501 A 1 HETATM 30 C C23 A1IHB . . . B 2 12.363 71.122 -0.148 1 50.22 ? C23 A1IHB 501 A 1 HETATM 31 C C24 A1IHB . . . B 2 13.413 70.781 -1.191 1 53.18 ? C24 A1IHB 501 A 1 HETATM 32 C C25 A1IHB . . . B 2 14.551 71.763 -1.231 1 57.2 ? C25 A1IHB 501 A 1 HETATM 33 C C26 A1IHB . . . B 2 15.374 71.74 0.04 1 56.42 ? C26 A1IHB 501 A 1 HETATM 34 C C27 A1IHB . . . B 2 16.198 72.994 0.24 1 52.27 ? C27 A1IHB 501 A 1 HETATM 35 C C28 A1IHB . . . B 2 15.968 73.635 1.594 1 59.24 ? C28 A1IHB 501 A 1 HETATM 36 C C29 A1IHB . . . B 2 15.512 75.077 1.524 1 62.86 ? C29 A1IHB 501 A 1 HETATM 37 C C30 A1IHB . . . B 2 15.936 77.042 0.146 1 66.49 ? C30 A1IHB 501 A 1 HETATM 38 C C31 A1IHB . . . B 2 14.442 77.252 0.067 1 56.56 ? C31 A1IHB 501 A 1 HETATM 39 C C32 A1IHB . . . B 2 13.803 77.055 -1.328 1 56.77 ? C32 A1IHB 501 A 1 HETATM 40 C C33 A1IHB . . . B 2 12.847 78.226 -1.6 1 54.76 ? C33 A1IHB 501 A 1 HETATM 41 C C34 A1IHB . . . B 2 12.183 78.074 -2.974 1 51.88 ? C34 A1IHB 501 A 1 HETATM 42 C C35 A1IHB . . . B 2 13.262 78.052 -4.058 1 48.11 ? C35 A1IHB 501 A 1 HETATM 43 C C36 A1IHB . . . B 2 14.204 76.872 -3.816 1 52.53 ? C36 A1IHB 501 A 1 HETATM 44 C C37 A1IHB . . . B 2 13.409 75.566 -3.855 1 51.95 ? C37 A1IHB 501 A 1 HETATM 45 C C38 A1IHB . . . B 2 12.332 75.591 -2.77 1 49.42 ? C38 A1IHB 501 A 1 HETATM 46 C C39 A1IHB . . . B 2 11.388 76.77 -3.011 1 49.73 ? C39 A1IHB 501 A 1 HETATM 47 C C40 A1IHB . . . B 2 12.997 75.746 -1.394 1 56.42 ? C40 A1IHB 501 A 1 HETATM 48 C C41 A1IHB . . . B 2 14.867 77.025 -2.44 1 44.54 ? C41 A1IHB 501 A 1 HETATM 49 O O2 A1IHB . . . B 2 16.732 77.93 -0.16 1 66.26 ? O2 A1IHB 501 A 1 HETATM 50 S S A1IHB . . . B 2 6.956 77.194 0.619 1 69.97 ? S A1IHB 501 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #