data_9G11 # _model_server_result.job_id ZsyslLl1qlKBw3J1lSm_fg _model_server_result.datetime_utc '2024-10-30 20:15:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9g11 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 9G11 # _exptl.entry_id 9G11 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.726 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9G11 _cell.length_a 122.221 _cell.length_b 122.221 _cell.length_c 139.091 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9G11 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 72 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 72 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 442 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 442 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 398 n n CBA CAB Y01 sing 399 n n CBA CAN Y01 sing 400 n n CAN CAJ Y01 sing 401 n n CAJ CAO Y01 sing 402 n n CAO CBB Y01 sing 403 n n CBB CAC Y01 sing 404 n n CBB CBE Y01 sing 405 n n CBE CAP Y01 sing 406 n n CBE CBI Y01 sing 407 n n CAP CAQ Y01 sing 408 n n CAQ CBG Y01 sing 409 n n CBG CBI Y01 sing 410 n n CBG CBD Y01 sing 411 n n CBI CAE Y01 sing 412 n n CBI CAU Y01 sing 413 n n CAU CAS Y01 sing 414 n n CAS CBF Y01 sing 415 n n CBF CBD Y01 sing 416 n n CBF CBH Y01 sing 417 n n CBD CAK Y01 sing 418 n n CAK CAI Y01 sing 419 n n CAI CAZ Y01 doub 420 n n CAZ CAV Y01 sing 421 n n CAZ CBH Y01 sing 422 n n CAV CBC Y01 sing 423 n n CBH CAD Y01 sing 424 n n CBH CAT Y01 sing 425 n n CAT CAR Y01 sing 426 n n CAR CBC Y01 sing 427 n n CBC OAW Y01 sing 428 n n OAW CAY Y01 sing 429 n n CAY OAG Y01 doub 430 n n CAY CAM Y01 sing 431 n n CAM CAL Y01 sing 432 n n CAL CAX Y01 sing 433 n n CAX OAH Y01 sing 434 n n CAX OAF Y01 doub 435 n n CAA HAA1 Y01 sing 436 n n CAA HAA2 Y01 sing 437 n n CAA HAA3 Y01 sing 438 n n CBA HBA Y01 sing 439 n n CAB HAB1 Y01 sing 440 n n CAB HAB2 Y01 sing 441 n n CAB HAB3 Y01 sing 442 n n CAN HAN1 Y01 sing 443 n n CAN HAN2 Y01 sing 444 n n CAJ HAJ1 Y01 sing 445 n n CAJ HAJ2 Y01 sing 446 n n CAO HAO1 Y01 sing 447 n n CAO HAO2 Y01 sing 448 n n CBB HBB Y01 sing 449 n n CAC HAC1 Y01 sing 450 n n CAC HAC2 Y01 sing 451 n n CAC HAC3 Y01 sing 452 n n CBE HBE Y01 sing 453 n n CAP HAP1 Y01 sing 454 n n CAP HAP2 Y01 sing 455 n n CAQ HAQ1 Y01 sing 456 n n CAQ HAQ2 Y01 sing 457 n n CBG HBG Y01 sing 458 n n CBD HBD Y01 sing 459 n n CAE HAE1 Y01 sing 460 n n CAE HAE2 Y01 sing 461 n n CAE HAE3 Y01 sing 462 n n CAU HAU1 Y01 sing 463 n n CAU HAU2 Y01 sing 464 n n CAS HAS1 Y01 sing 465 n n CAS HAS2 Y01 sing 466 n n CBF HBF Y01 sing 467 n n CAK HAK1 Y01 sing 468 n n CAK HAK2 Y01 sing 469 n n CAI HAI Y01 sing 470 n n CAV HAV1 Y01 sing 471 n n CAV HAV2 Y01 sing 472 n n CBC HBC Y01 sing 473 n n CAD HAD1 Y01 sing 474 n n CAD HAD2 Y01 sing 475 n n CAD HAD3 Y01 sing 476 n n CAT HAT1 Y01 sing 477 n n CAT HAT2 Y01 sing 478 n n CAR HAR1 Y01 sing 479 n n CAR HAR2 Y01 sing 480 n n CAM HAM1 Y01 sing 481 n n CAM HAM2 Y01 sing 482 n n CAL HAL1 Y01 sing 483 n n CAL HAL2 Y01 sing 484 n n OAH HAH Y01 sing 485 n n # _atom_sites.entry_id 9G11 _atom_sites.fract_transf_matrix[1][1] 0.008182 _atom_sites.fract_transf_matrix[1][2] 0.004724 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 601 501 BGC BGC . C 3 Y01 A 1 602 601 Y01 CHS . D 3 Y01 A 1 603 801 Y01 CHS . E 3 Y01 A 1 604 901 Y01 CHS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . C 3 63.882 -40.094 19.743 1 83.01 ? CAA Y01 602 A 1 HETATM 2 C CBA Y01 . . . C 3 65.231 -40.635 20.164 1 65.58 ? CBA Y01 602 A 1 HETATM 3 C CAB Y01 . . . C 3 66.219 -40.552 19.02 1 61.55 ? CAB Y01 602 A 1 HETATM 4 C CAN Y01 . . . C 3 65.136 -42.052 20.687 1 69.22 ? CAN Y01 602 A 1 HETATM 5 C CAJ Y01 . . . C 3 64.059 -42.301 21.729 1 82.93 ? CAJ Y01 602 A 1 HETATM 6 C CAO Y01 . . . C 3 64.548 -43.162 22.886 1 87.96 ? CAO Y01 602 A 1 HETATM 7 C CBB Y01 . . . C 3 64.501 -42.472 24.262 1 82.09 ? CBB Y01 602 A 1 HETATM 8 C CAC Y01 . . . C 3 63.668 -41.192 24.198 1 77.1 ? CAC Y01 602 A 1 HETATM 9 C CBE Y01 . . . C 3 64.107 -43.466 25.379 1 80.02 ? CBE Y01 602 A 1 HETATM 10 C CAP Y01 . . . C 3 64.342 -42.892 26.795 1 70.46 ? CAP Y01 602 A 1 HETATM 11 C CAQ Y01 . . . C 3 63.276 -43.528 27.705 1 70.59 ? CAQ Y01 602 A 1 HETATM 12 C CBG Y01 . . . C 3 62.775 -44.712 26.877 1 67.2 ? CBG Y01 602 A 1 HETATM 13 C CBI Y01 . . . C 3 62.706 -44.143 25.447 1 87.35 ? CBI Y01 602 A 1 HETATM 14 C CAE Y01 . . . C 3 61.513 -43.178 25.336 1 83.58 ? CAE Y01 602 A 1 HETATM 15 C CAU Y01 . . . C 3 62.504 -45.35 24.514 1 114.42 ? CAU Y01 602 A 1 HETATM 16 C CAS Y01 . . . C 3 61.312 -46.225 24.907 1 111.72 ? CAS Y01 602 A 1 HETATM 17 C CBF Y01 . . . C 3 61.35 -46.677 26.371 1 92.46 ? CBF Y01 602 A 1 HETATM 18 C CBD Y01 . . . C 3 61.527 -45.483 27.315 1 74.36 ? CBD Y01 602 A 1 HETATM 19 C CAK Y01 . . . C 3 61.7 -45.964 28.753 1 80.46 ? CAK Y01 602 A 1 HETATM 20 C CAI Y01 . . . C 3 60.877 -47.165 29.104 1 81.51 ? CAI Y01 602 A 1 HETATM 21 C CAZ Y01 . . . C 3 60.206 -47.905 28.242 1 82.7 ? CAZ Y01 602 A 1 HETATM 22 C CAV Y01 . . . C 3 59.415 -49.103 28.717 1 80.36 ? CAV Y01 602 A 1 HETATM 23 C CBH Y01 . . . C 3 60.158 -47.606 26.749 1 91.15 ? CBH Y01 602 A 1 HETATM 24 C CAD Y01 . . . C 3 58.802 -46.945 26.433 1 92.57 ? CAD Y01 602 A 1 HETATM 25 C CAT Y01 . . . C 3 60.291 -48.914 25.942 1 85.64 ? CAT Y01 602 A 1 HETATM 26 C CAR Y01 . . . C 3 59.462 -50.098 26.443 1 84.4 ? CAR Y01 602 A 1 HETATM 27 C CBC Y01 . . . C 3 59.758 -50.332 27.903 1 78.18 ? CBC Y01 602 A 1 HETATM 28 O OAW Y01 . . . C 3 58.993 -51.477 28.396 1 71.42 ? OAW Y01 602 A 1 HETATM 29 C CAY Y01 . . . C 3 59.641 -52.65 28.481 1 73.22 ? CAY Y01 602 A 1 HETATM 30 O OAG Y01 . . . C 3 60.763 -52.823 28.085 1 74.89 ? OAG Y01 602 A 1 HETATM 31 C CAM Y01 . . . C 3 58.797 -53.695 29.148 1 67.66 ? CAM Y01 602 A 1 HETATM 32 C CAL Y01 . . . C 3 58.714 -54.986 28.356 1 70.33 ? CAL Y01 602 A 1 HETATM 33 C CAX Y01 . . . C 3 57.893 -54.861 27.106 1 73.43 ? CAX Y01 602 A 1 HETATM 34 O OAH Y01 . . . C 3 56.606 -54.836 27.335 1 58.98 ? OAH Y01 602 A 1 HETATM 35 O OAF Y01 . . . C 3 58.378 -54.787 25.996 1 85.9 ? OAF Y01 602 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 629 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #