data_9G11 # _model_server_result.job_id 28MXcob8v3NpzJKcX-20UQ _model_server_result.datetime_utc '2024-11-22 12:09:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9g11 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 9G11 # _exptl.entry_id 9G11 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.726 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9G11 _cell.length_a 122.221 _cell.length_b 122.221 _cell.length_c 139.091 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9G11 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 72 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 72 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 442 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 442 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 398 n n CBA CAB Y01 sing 399 n n CBA CAN Y01 sing 400 n n CAN CAJ Y01 sing 401 n n CAJ CAO Y01 sing 402 n n CAO CBB Y01 sing 403 n n CBB CAC Y01 sing 404 n n CBB CBE Y01 sing 405 n n CBE CAP Y01 sing 406 n n CBE CBI Y01 sing 407 n n CAP CAQ Y01 sing 408 n n CAQ CBG Y01 sing 409 n n CBG CBI Y01 sing 410 n n CBG CBD Y01 sing 411 n n CBI CAE Y01 sing 412 n n CBI CAU Y01 sing 413 n n CAU CAS Y01 sing 414 n n CAS CBF Y01 sing 415 n n CBF CBD Y01 sing 416 n n CBF CBH Y01 sing 417 n n CBD CAK Y01 sing 418 n n CAK CAI Y01 sing 419 n n CAI CAZ Y01 doub 420 n n CAZ CAV Y01 sing 421 n n CAZ CBH Y01 sing 422 n n CAV CBC Y01 sing 423 n n CBH CAD Y01 sing 424 n n CBH CAT Y01 sing 425 n n CAT CAR Y01 sing 426 n n CAR CBC Y01 sing 427 n n CBC OAW Y01 sing 428 n n OAW CAY Y01 sing 429 n n CAY OAG Y01 doub 430 n n CAY CAM Y01 sing 431 n n CAM CAL Y01 sing 432 n n CAL CAX Y01 sing 433 n n CAX OAH Y01 sing 434 n n CAX OAF Y01 doub 435 n n CAA HAA1 Y01 sing 436 n n CAA HAA2 Y01 sing 437 n n CAA HAA3 Y01 sing 438 n n CBA HBA Y01 sing 439 n n CAB HAB1 Y01 sing 440 n n CAB HAB2 Y01 sing 441 n n CAB HAB3 Y01 sing 442 n n CAN HAN1 Y01 sing 443 n n CAN HAN2 Y01 sing 444 n n CAJ HAJ1 Y01 sing 445 n n CAJ HAJ2 Y01 sing 446 n n CAO HAO1 Y01 sing 447 n n CAO HAO2 Y01 sing 448 n n CBB HBB Y01 sing 449 n n CAC HAC1 Y01 sing 450 n n CAC HAC2 Y01 sing 451 n n CAC HAC3 Y01 sing 452 n n CBE HBE Y01 sing 453 n n CAP HAP1 Y01 sing 454 n n CAP HAP2 Y01 sing 455 n n CAQ HAQ1 Y01 sing 456 n n CAQ HAQ2 Y01 sing 457 n n CBG HBG Y01 sing 458 n n CBD HBD Y01 sing 459 n n CAE HAE1 Y01 sing 460 n n CAE HAE2 Y01 sing 461 n n CAE HAE3 Y01 sing 462 n n CAU HAU1 Y01 sing 463 n n CAU HAU2 Y01 sing 464 n n CAS HAS1 Y01 sing 465 n n CAS HAS2 Y01 sing 466 n n CBF HBF Y01 sing 467 n n CAK HAK1 Y01 sing 468 n n CAK HAK2 Y01 sing 469 n n CAI HAI Y01 sing 470 n n CAV HAV1 Y01 sing 471 n n CAV HAV2 Y01 sing 472 n n CBC HBC Y01 sing 473 n n CAD HAD1 Y01 sing 474 n n CAD HAD2 Y01 sing 475 n n CAD HAD3 Y01 sing 476 n n CAT HAT1 Y01 sing 477 n n CAT HAT2 Y01 sing 478 n n CAR HAR1 Y01 sing 479 n n CAR HAR2 Y01 sing 480 n n CAM HAM1 Y01 sing 481 n n CAM HAM2 Y01 sing 482 n n CAL HAL1 Y01 sing 483 n n CAL HAL2 Y01 sing 484 n n OAH HAH Y01 sing 485 n n # _atom_sites.entry_id 9G11 _atom_sites.fract_transf_matrix[1][1] 0.008182 _atom_sites.fract_transf_matrix[1][2] 0.004724 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 601 501 BGC BGC . C 3 Y01 A 1 602 601 Y01 CHS . D 3 Y01 A 1 603 801 Y01 CHS . E 3 Y01 A 1 604 901 Y01 CHS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . E 3 66.218 -36.595 25.98 1 61.32 ? CAA Y01 604 A 1 HETATM 2 C CBA Y01 . . . E 3 65.574 -35.234 26.173 1 69.72 ? CBA Y01 604 A 1 HETATM 3 C CAB Y01 . . . E 3 65.792 -34.735 27.586 1 62.52 ? CAB Y01 604 A 1 HETATM 4 C CAN Y01 . . . E 3 64.101 -35.283 25.848 1 71.28 ? CAN Y01 604 A 1 HETATM 5 C CAJ Y01 . . . E 3 63.259 -36.035 26.863 1 68.75 ? CAJ Y01 604 A 1 HETATM 6 C CAO Y01 . . . E 3 62.001 -36.611 26.248 1 58.94 ? CAO Y01 604 A 1 HETATM 7 C CBB Y01 . . . E 3 61.8 -38.114 26.49 1 61.98 ? CBB Y01 604 A 1 HETATM 8 C CAC Y01 . . . E 3 63.14 -38.807 26.719 1 56.32 ? CAC Y01 604 A 1 HETATM 9 C CBE Y01 . . . E 3 60.777 -38.366 27.612 1 60.22 ? CBE Y01 604 A 1 HETATM 10 C CAP Y01 . . . E 3 59.574 -37.417 27.502 1 48.76 ? CAP Y01 604 A 1 HETATM 11 C CAQ Y01 . . . E 3 58.41 -38.129 28.203 1 67.72 ? CAQ Y01 604 A 1 HETATM 12 C CBG Y01 . . . E 3 58.963 -39.484 28.671 1 63.24 ? CBG Y01 604 A 1 HETATM 13 C CBI Y01 . . . E 3 60.135 -39.767 27.714 1 72.11 ? CBI Y01 604 A 1 HETATM 14 C CAE Y01 . . . E 3 59.637 -40.233 26.335 1 81.55 ? CAE Y01 604 A 1 HETATM 15 C CAU Y01 . . . E 3 60.939 -40.879 28.394 1 69.98 ? CAU Y01 604 A 1 HETATM 16 C CAS Y01 . . . E 3 60.091 -42.142 28.551 1 70.55 ? CAS Y01 604 A 1 HETATM 17 C CBF Y01 . . . E 3 58.746 -41.926 29.264 1 63.29 ? CBF Y01 604 A 1 HETATM 18 C CBD Y01 . . . E 3 58.003 -40.667 28.793 1 53.28 ? CBD Y01 604 A 1 HETATM 19 C CAK Y01 . . . E 3 56.863 -40.367 29.752 1 55.93 ? CAK Y01 604 A 1 HETATM 20 C CAI Y01 . . . E 3 56.055 -41.597 30.036 1 71.39 ? CAI Y01 604 A 1 HETATM 21 C CAZ Y01 . . . E 3 56.461 -42.838 29.798 1 72.45 ? CAZ Y01 604 A 1 HETATM 22 C CAV Y01 . . . E 3 55.552 -44.01 30.103 1 63.02 ? CAV Y01 604 A 1 HETATM 23 C CBH Y01 . . . E 3 57.818 -43.177 29.196 1 68.74 ? CBH Y01 604 A 1 HETATM 24 C CAD Y01 . . . E 3 57.599 -43.637 27.743 1 79.26 ? CAD Y01 604 A 1 HETATM 25 C CAT Y01 . . . E 3 58.458 -44.323 29.993 1 59.58 ? CAT Y01 604 A 1 HETATM 26 C CAR Y01 . . . E 3 57.677 -44.677 31.258 1 57.77 ? CAR Y01 604 A 1 HETATM 27 C CBC Y01 . . . E 3 56.248 -45.071 30.94 1 63.66 ? CBC Y01 604 A 1 HETATM 28 O OAW Y01 . . . E 3 56.162 -46.455 30.424 1 86.57 ? OAW Y01 604 A 1 HETATM 29 C CAY Y01 . . . E 3 55.505 -46.788 29.281 1 84.19 ? CAY Y01 604 A 1 HETATM 30 O OAG Y01 . . . E 3 55.344 -46.058 28.337 1 79.29 ? OAG Y01 604 A 1 HETATM 31 C CAM Y01 . . . E 3 55.039 -48.215 29.33 1 72.6 ? CAM Y01 604 A 1 HETATM 32 C CAL Y01 . . . E 3 53.538 -48.36 29.56 1 83.93 ? CAL Y01 604 A 1 HETATM 33 C CAX Y01 . . . E 3 53.053 -47.768 30.853 1 95.44 ? CAX Y01 604 A 1 HETATM 34 O OAH Y01 . . . E 3 53.031 -48.625 31.84 1 91.23 ? OAH Y01 604 A 1 HETATM 35 O OAF Y01 . . . E 3 52.699 -46.611 30.97 1 98.27 ? OAF Y01 604 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #