data_9G1T # _model_server_result.job_id UtOxnqsEpLTJshDZp_c6vA _model_server_result.datetime_utc '2025-07-17 06:24:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9g1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 9G1T # _exptl.entry_id 9G1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 426.911 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-chloranyl-3-fluoranyl-phenyl)-9-[(~{E})-3-phenylprop-2-enoyl]-1,9-diazaspiro[5.5]undecan-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9G1T _cell.length_a 170.352 _cell.length_b 170.352 _cell.length_c 170.352 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9G1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_636 z+1,x-2,y+1 0 0 1 1 0 0 0 1 0 170.352 -340.704 170.352 3 'crystal symmetry operation' 9_744 y+2,z-1,x-1 0 1 0 0 0 1 1 0 0 340.704 -170.352 -170.352 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H24 Cl F N2 O2' _chem_comp.formula_weight 426.911 _chem_comp.id A1IH0 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-chloranyl-3-fluoranyl-phenyl)-9-[(~{E})-3-phenylprop-2-enoyl]-1,9-diazaspiro[5.5]undecan-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C21 A1IH0 doub 1 n y C20 C19 A1IH0 sing 2 n y C21 C22 A1IH0 sing 3 n y C19 C18 A1IH0 doub 4 n y C22 C23 A1IH0 doub 5 n y C18 C23 A1IH0 sing 6 n y C18 C17 A1IH0 sing 7 n n C4 C5 A1IH0 sing 8 n n C4 N3 A1IH0 sing 9 n n C16 C17 A1IH0 doub 10 e n C16 C14 A1IH0 sing 11 n n C5 C6 A1IH0 sing 12 n n F30 C27 A1IH0 sing 13 n n C11 C10 A1IH0 sing 14 n n C11 C6 A1IH0 sing 15 n n C28 C27 A1IH0 doub 16 n y C28 C13 A1IH0 sing 17 n y N3 C14 A1IH0 sing 18 n n N3 C2 A1IH0 sing 19 n n C10 C9 A1IH0 sing 20 n n C6 N7 A1IH0 sing 21 n n C6 C1 A1IH0 sing 22 n n C27 C26 A1IH0 sing 23 n y C14 O15 A1IH0 doub 24 n n C9 C8 A1IH0 sing 25 n n N7 C8 A1IH0 sing 26 n n N7 C13 A1IH0 sing 27 n n C8 O12 A1IH0 doub 28 n n C13 C24 A1IH0 doub 29 n y C2 C1 A1IH0 sing 30 n n C26 CL29 A1IH0 sing 31 n n C26 C25 A1IH0 doub 32 n y C24 C25 A1IH0 sing 33 n y C1 H1 A1IH0 sing 34 n n C1 H2 A1IH0 sing 35 n n C2 H3 A1IH0 sing 36 n n C2 H4 A1IH0 sing 37 n n C11 H5 A1IH0 sing 38 n n C11 H6 A1IH0 sing 39 n n C16 H7 A1IH0 sing 40 n n C17 H8 A1IH0 sing 41 n n C19 H9 A1IH0 sing 42 n n C20 H10 A1IH0 sing 43 n n C21 H11 A1IH0 sing 44 n n C22 H12 A1IH0 sing 45 n n C23 H13 A1IH0 sing 46 n n C24 H14 A1IH0 sing 47 n n C25 H15 A1IH0 sing 48 n n C28 H16 A1IH0 sing 49 n n C4 H17 A1IH0 sing 50 n n C4 H18 A1IH0 sing 51 n n C5 H19 A1IH0 sing 52 n n C5 H20 A1IH0 sing 53 n n C9 H21 A1IH0 sing 54 n n C9 H22 A1IH0 sing 55 n n C10 H23 A1IH0 sing 56 n n C10 H24 A1IH0 sing 57 n n # _atom_sites.entry_id 9G1T _atom_sites.fract_transf_matrix[1][1] 0.00587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00587 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 201 909 PLM PLM . C 3 PAM A 1 202 1002 PAM PAM . D 4 A1IH0 A 1 203 1 A1IH0 LI1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1IH0 . . . D 4 345.05 20.62 198.617 1 135.91 ? C1 A1IH0 203 A 1 HETATM 2 C C2 A1IH0 . . . D 4 343.597 21.045 198.296 1 133.57 ? C2 A1IH0 203 A 1 HETATM 3 C C11 A1IH0 . . . D 4 345.704 19.248 196.537 1 142.01 ? C11 A1IH0 203 A 1 HETATM 4 C C13 A1IH0 . . . D 4 348.205 21.446 198.163 1 144.06 ? C13 A1IH0 203 A 1 HETATM 5 C C14 A1IH0 . . . D 4 342.685 23.162 197.449 1 134.56 ? C14 A1IH0 203 A 1 HETATM 6 C C16 A1IH0 . . . D 4 342.599 24.238 196.44 1 136.71 ? C16 A1IH0 203 A 1 HETATM 7 C C17 A1IH0 . . . D 4 343.12 25.452 196.655 1 140.84 ? C17 A1IH0 203 A 1 HETATM 8 C C18 A1IH0 . . . D 4 343.076 26.593 195.665 1 145.21 ? C18 A1IH0 203 A 1 HETATM 9 C C19 A1IH0 . . . D 4 343.633 26.375 194.4 1 147.62 ? C19 A1IH0 203 A 1 HETATM 10 C C20 A1IH0 . . . D 4 343.628 27.384 193.435 1 148.78 ? C20 A1IH0 203 A 1 HETATM 11 C C21 A1IH0 . . . D 4 343.062 28.627 193.729 1 149.59 ? C21 A1IH0 203 A 1 HETATM 12 C C22 A1IH0 . . . D 4 342.504 28.853 194.99 1 149.2 ? C22 A1IH0 203 A 1 HETATM 13 C C23 A1IH0 . . . D 4 342.511 27.841 195.953 1 146.95 ? C23 A1IH0 203 A 1 HETATM 14 C C24 A1IH0 . . . D 4 348.143 22.067 199.414 1 145.6 ? C24 A1IH0 203 A 1 HETATM 15 C C25 A1IH0 . . . D 4 348.906 23.205 199.673 1 147.77 ? C25 A1IH0 203 A 1 HETATM 16 C C26 A1IH0 . . . D 4 349.738 23.734 198.689 1 149.25 ? C26 A1IH0 203 A 1 HETATM 17 C C27 A1IH0 . . . D 4 349.804 23.122 197.437 1 147.55 ? C27 A1IH0 203 A 1 HETATM 18 C C28 A1IH0 . . . D 4 349.042 21.983 197.176 1 145.74 ? C28 A1IH0 203 A 1 HETATM 19 N N3 A1IH0 . . . D 4 343.512 22.095 197.293 1 132.68 ? N3 A1IH0 203 A 1 HETATM 20 C C4 A1IH0 . . . D 4 344.34 22.03 196.1 1 132.64 ? C4 A1IH0 203 A 1 HETATM 21 C C5 A1IH0 . . . D 4 345.808 21.729 196.478 1 135.32 ? C5 A1IH0 203 A 1 HETATM 22 C C6 A1IH0 . . . D 4 346.034 20.494 197.412 1 139.09 ? C6 A1IH0 203 A 1 HETATM 23 N N7 A1IH0 . . . D 4 347.416 20.293 197.897 1 142.81 ? N7 A1IH0 203 A 1 HETATM 24 C C8 A1IH0 . . . D 4 347.961 19.061 198.117 1 144.82 ? C8 A1IH0 203 A 1 HETATM 25 C C9 A1IH0 . . . D 4 347.246 17.753 197.882 1 146.57 ? C9 A1IH0 203 A 1 HETATM 26 C C10 A1IH0 . . . D 4 345.81 17.923 197.326 1 144.72 ? C10 A1IH0 203 A 1 HETATM 27 O O12 A1IH0 . . . D 4 349.101 18.945 198.528 1 143.29 ? O12 A1IH0 203 A 1 HETATM 28 O O15 A1IH0 . . . D 4 341.971 23.284 198.43 1 134.32 ? O15 A1IH0 203 A 1 HETATM 29 CL CL29 A1IH0 . . . D 4 350.7 25.16 199.019 1 151.35 ? CL29 A1IH0 203 A 1 HETATM 30 F F30 A1IH0 . . . D 4 350.599 23.623 196.494 1 146.83 ? F30 A1IH0 203 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #