data_9G4O
#
_model_server_result.job_id            S7Acrz7VTg9tFQeR37bwTQ 
_model_server_result.datetime_utc      '2025-08-31 01:51:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9g4o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    9G4O 
#
_exptl.entry_id    9G4O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         113.3 
_cell.angle_beta          99.54 
_cell.angle_gamma         95.01 
_cell.entry_id            9G4O 
_cell.length_a            36.155 
_cell.length_b            45.702 
_cell.length_c            48.44 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9G4O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 259 n n 
C1 H11 MPD sing 260 n n 
C1 H12 MPD sing 261 n n 
C1 H13 MPD sing 262 n n 
C2 O2 MPD sing 263 n n 
C2 CM MPD sing 264 n n 
C2 C3 MPD sing 265 n n 
O2 HO2 MPD sing 266 n n 
CM HM1 MPD sing 267 n n 
CM HM2 MPD sing 268 n n 
CM HM3 MPD sing 269 n n 
C3 C4 MPD sing 270 n n 
C3 H31 MPD sing 271 n n 
C3 H32 MPD sing 272 n n 
C4 O4 MPD sing 273 n n 
C4 C5 MPD sing 274 n n 
C4 H4 MPD sing 275 n n 
O4 HO4 MPD sing 276 n n 
C5 H51 MPD sing 277 n n 
C5 H52 MPD sing 278 n n 
C5 H53 MPD sing 279 n n 
#
_atom_sites.entry_id                     9G4O 
_atom_sites.fract_transf_matrix[1][1]    0.027659 
_atom_sites.fract_transf_matrix[1][2]    0.002427 
_atom_sites.fract_transf_matrix[1][3]    0.006231 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021965 
_atom_sites.fract_transf_matrix[2][3]    0.010087 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023036 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MPD A 1 301 301 MPD MPD . 
C 2 MPD A 1 302 302 MPD MPD . 
D 3 NAD A 1 303 303 NAD LIG . 
E 4 A1IH7 A 1 304 304 A1IH7 FRA . 
F 5 HOH A 1 401 138 HOH HOH . 
F 5 HOH A 2 402 156 HOH HOH . 
F 5 HOH A 3 403 142 HOH HOH . 
F 5 HOH A 4 404 163 HOH HOH . 
F 5 HOH A 5 405 16 HOH HOH . 
F 5 HOH A 6 406 137 HOH HOH . 
F 5 HOH A 7 407 74 HOH HOH . 
F 5 HOH A 8 408 154 HOH HOH . 
F 5 HOH A 9 409 151 HOH HOH . 
F 5 HOH A 10 410 147 HOH HOH . 
F 5 HOH A 11 411 61 HOH HOH . 
F 5 HOH A 12 412 56 HOH HOH . 
F 5 HOH A 13 413 91 HOH HOH . 
F 5 HOH A 14 414 155 HOH HOH . 
F 5 HOH A 15 415 143 HOH HOH . 
F 5 HOH A 16 416 40 HOH HOH . 
F 5 HOH A 17 417 28 HOH HOH . 
F 5 HOH A 18 418 89 HOH HOH . 
F 5 HOH A 19 419 149 HOH HOH . 
F 5 HOH A 20 420 41 HOH HOH . 
F 5 HOH A 21 421 54 HOH HOH . 
F 5 HOH A 22 422 85 HOH HOH . 
F 5 HOH A 23 423 141 HOH HOH . 
F 5 HOH A 24 424 27 HOH HOH . 
F 5 HOH A 25 425 7 HOH HOH . 
F 5 HOH A 26 426 90 HOH HOH . 
F 5 HOH A 27 427 122 HOH HOH . 
F 5 HOH A 28 428 157 HOH HOH . 
F 5 HOH A 29 429 48 HOH HOH . 
F 5 HOH A 30 430 32 HOH HOH . 
F 5 HOH A 31 431 103 HOH HOH . 
F 5 HOH A 32 432 2 HOH HOH . 
F 5 HOH A 33 433 22 HOH HOH . 
F 5 HOH A 34 434 55 HOH HOH . 
F 5 HOH A 35 435 59 HOH HOH . 
F 5 HOH A 36 436 79 HOH HOH . 
F 5 HOH A 37 437 114 HOH HOH . 
F 5 HOH A 38 438 8 HOH HOH . 
F 5 HOH A 39 439 42 HOH HOH . 
F 5 HOH A 40 440 3 HOH HOH . 
F 5 HOH A 41 441 20 HOH HOH . 
F 5 HOH A 42 442 50 HOH HOH . 
F 5 HOH A 43 443 43 HOH HOH . 
F 5 HOH A 44 444 29 HOH HOH . 
F 5 HOH A 45 445 4 HOH HOH . 
F 5 HOH A 46 446 102 HOH HOH . 
F 5 HOH A 47 447 68 HOH HOH . 
F 5 HOH A 48 448 92 HOH HOH . 
F 5 HOH A 49 449 65 HOH HOH . 
F 5 HOH A 50 450 71 HOH HOH . 
F 5 HOH A 51 451 38 HOH HOH . 
F 5 HOH A 52 452 119 HOH HOH . 
F 5 HOH A 53 453 62 HOH HOH . 
F 5 HOH A 54 454 52 HOH HOH . 
F 5 HOH A 55 455 14 HOH HOH . 
F 5 HOH A 56 456 44 HOH HOH . 
F 5 HOH A 57 457 31 HOH HOH . 
F 5 HOH A 58 458 21 HOH HOH . 
F 5 HOH A 59 459 34 HOH HOH . 
F 5 HOH A 60 460 26 HOH HOH . 
F 5 HOH A 61 461 150 HOH HOH . 
F 5 HOH A 62 462 140 HOH HOH . 
F 5 HOH A 63 463 88 HOH HOH . 
F 5 HOH A 64 464 78 HOH HOH . 
F 5 HOH A 65 465 39 HOH HOH . 
F 5 HOH A 66 466 115 HOH HOH . 
F 5 HOH A 67 467 69 HOH HOH . 
F 5 HOH A 68 468 116 HOH HOH . 
F 5 HOH A 69 469 15 HOH HOH . 
F 5 HOH A 70 470 158 HOH HOH . 
F 5 HOH A 71 471 36 HOH HOH . 
F 5 HOH A 72 472 10 HOH HOH . 
F 5 HOH A 73 473 33 HOH HOH . 
F 5 HOH A 74 474 84 HOH HOH . 
F 5 HOH A 75 475 105 HOH HOH . 
F 5 HOH A 76 476 9 HOH HOH . 
F 5 HOH A 77 477 25 HOH HOH . 
F 5 HOH A 78 478 80 HOH HOH . 
F 5 HOH A 79 479 117 HOH HOH . 
F 5 HOH A 80 480 13 HOH HOH . 
F 5 HOH A 81 481 30 HOH HOH . 
F 5 HOH A 82 482 73 HOH HOH . 
F 5 HOH A 83 483 106 HOH HOH . 
F 5 HOH A 84 484 24 HOH HOH . 
F 5 HOH A 85 485 107 HOH HOH . 
F 5 HOH A 86 486 46 HOH HOH . 
F 5 HOH A 87 487 81 HOH HOH . 
F 5 HOH A 88 488 70 HOH HOH . 
F 5 HOH A 89 489 49 HOH HOH . 
F 5 HOH A 90 490 128 HOH HOH . 
F 5 HOH A 91 491 64 HOH HOH . 
F 5 HOH A 92 492 58 HOH HOH . 
F 5 HOH A 93 493 18 HOH HOH . 
F 5 HOH A 94 494 118 HOH HOH . 
F 5 HOH A 95 495 72 HOH HOH . 
F 5 HOH A 96 496 127 HOH HOH . 
F 5 HOH A 97 497 53 HOH HOH . 
F 5 HOH A 98 498 101 HOH HOH . 
F 5 HOH A 99 499 57 HOH HOH . 
F 5 HOH A 100 500 60 HOH HOH . 
F 5 HOH A 101 501 82 HOH HOH . 
F 5 HOH A 102 502 76 HOH HOH . 
F 5 HOH A 103 503 51 HOH HOH . 
F 5 HOH A 104 504 19 HOH HOH . 
F 5 HOH A 105 505 47 HOH HOH . 
F 5 HOH A 106 506 77 HOH HOH . 
F 5 HOH A 107 507 113 HOH HOH . 
F 5 HOH A 108 508 45 HOH HOH . 
F 5 HOH A 109 509 96 HOH HOH . 
F 5 HOH A 110 510 6 HOH HOH . 
F 5 HOH A 111 511 109 HOH HOH . 
F 5 HOH A 112 512 67 HOH HOH . 
F 5 HOH A 113 513 99 HOH HOH . 
F 5 HOH A 114 514 108 HOH HOH . 
F 5 HOH A 115 515 121 HOH HOH . 
F 5 HOH A 116 516 112 HOH HOH . 
F 5 HOH A 117 517 11 HOH HOH . 
F 5 HOH A 118 518 5 HOH HOH . 
F 5 HOH A 119 519 130 HOH HOH . 
F 5 HOH A 120 520 111 HOH HOH . 
F 5 HOH A 121 521 66 HOH HOH . 
F 5 HOH A 122 522 146 HOH HOH . 
F 5 HOH A 123 523 63 HOH HOH . 
F 5 HOH A 124 524 1 HOH HOH . 
F 5 HOH A 125 525 17 HOH HOH . 
F 5 HOH A 126 526 94 HOH HOH . 
F 5 HOH A 127 527 129 HOH HOH . 
F 5 HOH A 128 528 97 HOH HOH . 
F 5 HOH A 129 529 100 HOH HOH . 
F 5 HOH A 130 530 139 HOH HOH . 
F 5 HOH A 131 531 23 HOH HOH . 
F 5 HOH A 132 532 35 HOH HOH . 
F 5 HOH A 133 533 75 HOH HOH . 
F 5 HOH A 134 534 12 HOH HOH . 
F 5 HOH A 135 535 148 HOH HOH . 
F 5 HOH A 136 536 123 HOH HOH . 
F 5 HOH A 137 537 87 HOH HOH . 
F 5 HOH A 138 538 126 HOH HOH . 
F 5 HOH A 139 539 161 HOH HOH . 
F 5 HOH A 140 540 131 HOH HOH . 
F 5 HOH A 141 541 132 HOH HOH . 
F 5 HOH A 142 542 125 HOH HOH . 
F 5 HOH A 143 543 144 HOH HOH . 
F 5 HOH A 144 544 162 HOH HOH . 
F 5 HOH A 145 545 160 HOH HOH . 
F 5 HOH A 146 546 134 HOH HOH . 
F 5 HOH A 147 547 37 HOH HOH . 
F 5 HOH A 148 548 83 HOH HOH . 
F 5 HOH A 149 549 145 HOH HOH . 
F 5 HOH A 150 550 152 HOH HOH . 
F 5 HOH A 151 551 133 HOH HOH . 
F 5 HOH A 152 552 124 HOH HOH . 
F 5 HOH A 153 553 135 HOH HOH . 
F 5 HOH A 154 554 120 HOH HOH . 
F 5 HOH A 155 555 136 HOH HOH . 
F 5 HOH A 156 556 93 HOH HOH . 
F 5 HOH A 157 557 110 HOH HOH . 
F 5 HOH A 158 558 153 HOH HOH . 
F 5 HOH A 159 559 86 HOH HOH . 
F 5 HOH A 160 560 95 HOH HOH . 
F 5 HOH A 161 561 98 HOH HOH . 
F 5 HOH A 162 562 159 HOH HOH . 
F 5 HOH A 163 563 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . B 2 3.549 -3.199 -17.414 1 10.68 ? C1 MPD 301 A 1 
HETATM 2 C C2 MPD . . . B 2 3.777 -1.705 -17.216 1 11.69 ? C2 MPD 301 A 1 
HETATM 3 O O2 MPD . . . B 2 4.717 -1.553 -16.128 1 13.56 ? O2 MPD 301 A 1 
HETATM 4 C CM MPD . . . B 2 2.474 -1.038 -16.802 1 12.97 ? CM MPD 301 A 1 
HETATM 5 C C3 MPD . . . B 2 4.364 -1.004 -18.444 1 16.7 ? C3 MPD 301 A 1 
HETATM 6 C C4 MPD . . . B 2 4.109 0.51 -18.387 1 18.06 ? C4 MPD 301 A 1 
HETATM 7 O O4 MPD . . . B 2 4.698 1.07 -17.226 1 13.46 ? O4 MPD 301 A 1 
HETATM 8 C C5 MPD . . . B 2 4.664 1.206 -19.627 1 12.94 ? C5 MPD 301 A 1 
#
_model_server_stats.io_time_ms              76 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           411 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
#