data_9G63 # _model_server_result.job_id XzFPNAUGkGBUZ0rDH7nd8A _model_server_result.datetime_utc '2025-08-03 23:00:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9g63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 9G63 # _exptl.entry_id 9G63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.188 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9G63 _cell.length_a 55.493 _cell.length_b 136.84 _cell.length_c 143.052 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9G63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I 1 1 B,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 251 B TYR 276 1_555 A N YCM 252 B YCM 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C YCM 252 B YCM 277 1_555 A N VAL 253 B VAL 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? # _chem_comp.formula 'C8 H16 N O9 P' _chem_comp.formula_weight 301.188 _chem_comp.id GN1 _chem_comp.mon_nstd_flag n _chem_comp.name 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 2-(ACETYLAMINO)-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE;N-ACETYL-D-GLUCOSAMINE-1-PHOSPHATE;N-acetyl-1-O-phosphono-alpha-D-glucosamine;2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucose;2-acetamido-2-deoxy-1-O-phosphono-D-glucose;2-acetamido-2-deoxy-1-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GN1 sing 169 n n C1 O5 GN1 sing 170 n n C1 C2 GN1 sing 171 n n C1 H1 GN1 sing 172 n n OP1 P GN1 sing 173 n n OP1 HOP1 GN1 sing 174 n n P OP3 GN1 doub 175 n n P OP2 GN1 sing 176 n n P O1 GN1 sing 177 n n OP2 HOP2 GN1 sing 178 n n C2 C3 GN1 sing 179 n n C2 N2 GN1 sing 180 n n C2 H2 GN1 sing 181 n n C3 C4 GN1 sing 182 n n C3 O3 GN1 sing 183 n n C3 H3 GN1 sing 184 n n C4 C5 GN1 sing 185 n n C4 O4 GN1 sing 186 n n C4 H4 GN1 sing 187 n n C5 C6 GN1 sing 188 n n C5 O5 GN1 sing 189 n n C5 H5 GN1 sing 190 n n C6 O6 GN1 sing 191 n n C6 H61 GN1 sing 192 n n C6 H62 GN1 sing 193 n n C8 C7 GN1 sing 194 n n C8 H81 GN1 sing 195 n n C8 H82 GN1 sing 196 n n C8 H83 GN1 sing 197 n n O3 HO3 GN1 sing 198 n n O4 HO4 GN1 sing 199 n n N2 C7 GN1 sing 200 n n N2 HN2 GN1 sing 201 n n C7 O7 GN1 doub 202 n n O6 HO6 GN1 sing 203 n n # _pdbx_chem_comp_identifier.comp_id GN1 _pdbx_chem_comp_identifier.identifier a-D-Glcp1PO3NAc _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 9G63 _atom_sites.fract_transf_matrix[1][1] 0.01802 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00699 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GN1 B 1 601 602 GN1 GN1 . D 4 A1IHU B 1 602 603 A1IHU DRG . E 4 A1IHU B 1 603 604 A1IHU DRG . F 4 A1IHU B 1 604 605 A1IHU DRG . G 5 A1IIR B 1 605 606 A1IIR 97 . H 6 CL B 1 606 1 CL CL . I 7 HOH B 1 701 167 HOH HOH . I 7 HOH B 2 702 80 HOH HOH . I 7 HOH B 3 703 172 HOH HOH . I 7 HOH B 4 704 52 HOH HOH . I 7 HOH B 5 705 141 HOH HOH . I 7 HOH B 6 706 165 HOH HOH . I 7 HOH B 7 707 71 HOH HOH . I 7 HOH B 8 708 66 HOH HOH . I 7 HOH B 9 709 79 HOH HOH . I 7 HOH B 10 710 5 HOH HOH . I 7 HOH B 11 711 60 HOH HOH . I 7 HOH B 12 712 108 HOH HOH . I 7 HOH B 13 713 164 HOH HOH . I 7 HOH B 14 714 19 HOH HOH . I 7 HOH B 15 715 58 HOH HOH . I 7 HOH B 16 716 73 HOH HOH . I 7 HOH B 17 717 133 HOH HOH . I 7 HOH B 18 718 65 HOH HOH . I 7 HOH B 19 719 140 HOH HOH . I 7 HOH B 20 720 81 HOH HOH . I 7 HOH B 21 721 117 HOH HOH . I 7 HOH B 22 722 129 HOH HOH . I 7 HOH B 23 723 103 HOH HOH . I 7 HOH B 24 724 67 HOH HOH . I 7 HOH B 25 725 92 HOH HOH . I 7 HOH B 26 726 37 HOH HOH . I 7 HOH B 27 727 51 HOH HOH . I 7 HOH B 28 728 3 HOH HOH . I 7 HOH B 29 729 82 HOH HOH . I 7 HOH B 30 730 33 HOH HOH . I 7 HOH B 31 731 70 HOH HOH . I 7 HOH B 32 732 7 HOH HOH . I 7 HOH B 33 733 55 HOH HOH . I 7 HOH B 34 734 68 HOH HOH . I 7 HOH B 35 735 74 HOH HOH . I 7 HOH B 36 736 100 HOH HOH . I 7 HOH B 37 737 1 HOH HOH . I 7 HOH B 38 738 72 HOH HOH . I 7 HOH B 39 739 32 HOH HOH . I 7 HOH B 40 740 96 HOH HOH . I 7 HOH B 41 741 134 HOH HOH . I 7 HOH B 42 742 75 HOH HOH . I 7 HOH B 43 743 119 HOH HOH . I 7 HOH B 44 744 56 HOH HOH . I 7 HOH B 45 745 98 HOH HOH . I 7 HOH B 46 746 13 HOH HOH . I 7 HOH B 47 747 120 HOH HOH . I 7 HOH B 48 748 26 HOH HOH . I 7 HOH B 49 749 173 HOH HOH . I 7 HOH B 50 750 84 HOH HOH . I 7 HOH B 51 751 162 HOH HOH . I 7 HOH B 52 752 27 HOH HOH . I 7 HOH B 53 753 102 HOH HOH . I 7 HOH B 54 754 118 HOH HOH . I 7 HOH B 55 755 11 HOH HOH . I 7 HOH B 56 756 78 HOH HOH . I 7 HOH B 57 757 61 HOH HOH . I 7 HOH B 58 758 87 HOH HOH . I 7 HOH B 59 759 95 HOH HOH . I 7 HOH B 60 760 34 HOH HOH . I 7 HOH B 61 761 127 HOH HOH . I 7 HOH B 62 762 107 HOH HOH . I 7 HOH B 63 763 17 HOH HOH . I 7 HOH B 64 764 175 HOH HOH . I 7 HOH B 65 765 21 HOH HOH . I 7 HOH B 66 766 15 HOH HOH . I 7 HOH B 67 767 22 HOH HOH . I 7 HOH B 68 768 31 HOH HOH . I 7 HOH B 69 769 130 HOH HOH . I 7 HOH B 70 770 49 HOH HOH . I 7 HOH B 71 771 125 HOH HOH . I 7 HOH B 72 772 101 HOH HOH . I 7 HOH B 73 773 86 HOH HOH . I 7 HOH B 74 774 28 HOH HOH . I 7 HOH B 75 775 99 HOH HOH . I 7 HOH B 76 776 169 HOH HOH . I 7 HOH B 77 777 116 HOH HOH . I 7 HOH B 78 778 25 HOH HOH . I 7 HOH B 79 779 23 HOH HOH . I 7 HOH B 80 780 139 HOH HOH . I 7 HOH B 81 781 132 HOH HOH . I 7 HOH B 82 782 170 HOH HOH . I 7 HOH B 83 783 57 HOH HOH . I 7 HOH B 84 784 123 HOH HOH . I 7 HOH B 85 785 105 HOH HOH . I 7 HOH B 86 786 42 HOH HOH . I 7 HOH B 87 787 90 HOH HOH . I 7 HOH B 88 788 174 HOH HOH . I 7 HOH B 89 789 145 HOH HOH . I 7 HOH B 90 790 157 HOH HOH . I 7 HOH B 91 791 54 HOH HOH . I 7 HOH B 92 792 18 HOH HOH . I 7 HOH B 93 793 166 HOH HOH . I 7 HOH B 94 794 171 HOH HOH . I 7 HOH B 95 795 137 HOH HOH . I 7 HOH B 96 796 142 HOH HOH . I 7 HOH B 97 797 168 HOH HOH . I 7 HOH B 98 798 163 HOH HOH . I 7 HOH B 99 799 40 HOH HOH . I 7 HOH B 100 800 43 HOH HOH . I 7 HOH B 101 801 122 HOH HOH . I 7 HOH B 102 802 136 HOH HOH . I 7 HOH B 103 803 148 HOH HOH . I 7 HOH B 104 804 94 HOH HOH . J 7 HOH A 1 601 147 HOH HOH . J 7 HOH A 2 602 143 HOH HOH . J 7 HOH A 3 603 161 HOH HOH . J 7 HOH A 4 604 69 HOH HOH . J 7 HOH A 5 605 160 HOH HOH . J 7 HOH A 6 606 36 HOH HOH . J 7 HOH A 7 607 149 HOH HOH . J 7 HOH A 8 608 46 HOH HOH . J 7 HOH A 9 609 153 HOH HOH . J 7 HOH A 10 610 29 HOH HOH . J 7 HOH A 11 611 20 HOH HOH . J 7 HOH A 12 612 151 HOH HOH . J 7 HOH A 13 613 128 HOH HOH . J 7 HOH A 14 614 159 HOH HOH . J 7 HOH A 15 615 89 HOH HOH . J 7 HOH A 16 616 138 HOH HOH . J 7 HOH A 17 617 12 HOH HOH . J 7 HOH A 18 618 10 HOH HOH . J 7 HOH A 19 619 152 HOH HOH . J 7 HOH A 20 620 44 HOH HOH . J 7 HOH A 21 621 4 HOH HOH . J 7 HOH A 22 622 9 HOH HOH . J 7 HOH A 23 623 62 HOH HOH . J 7 HOH A 24 624 14 HOH HOH . J 7 HOH A 25 625 41 HOH HOH . J 7 HOH A 26 626 59 HOH HOH . J 7 HOH A 27 627 106 HOH HOH . J 7 HOH A 28 628 77 HOH HOH . J 7 HOH A 29 629 88 HOH HOH . J 7 HOH A 30 630 150 HOH HOH . J 7 HOH A 31 631 85 HOH HOH . J 7 HOH A 32 632 126 HOH HOH . J 7 HOH A 33 633 109 HOH HOH . J 7 HOH A 34 634 63 HOH HOH . J 7 HOH A 35 635 16 HOH HOH . J 7 HOH A 36 636 35 HOH HOH . J 7 HOH A 37 637 6 HOH HOH . J 7 HOH A 38 638 124 HOH HOH . J 7 HOH A 39 639 8 HOH HOH . J 7 HOH A 40 640 50 HOH HOH . J 7 HOH A 41 641 121 HOH HOH . J 7 HOH A 42 642 93 HOH HOH . J 7 HOH A 43 643 83 HOH HOH . J 7 HOH A 44 644 47 HOH HOH . J 7 HOH A 45 645 91 HOH HOH . J 7 HOH A 46 646 135 HOH HOH . J 7 HOH A 47 647 2 HOH HOH . J 7 HOH A 48 648 48 HOH HOH . J 7 HOH A 49 649 114 HOH HOH . J 7 HOH A 50 650 112 HOH HOH . J 7 HOH A 51 651 113 HOH HOH . J 7 HOH A 52 652 30 HOH HOH . J 7 HOH A 53 653 39 HOH HOH . J 7 HOH A 54 654 131 HOH HOH . J 7 HOH A 55 655 38 HOH HOH . J 7 HOH A 56 656 111 HOH HOH . J 7 HOH A 57 657 156 HOH HOH . J 7 HOH A 58 658 97 HOH HOH . J 7 HOH A 59 659 45 HOH HOH . J 7 HOH A 60 660 24 HOH HOH . J 7 HOH A 61 661 104 HOH HOH . J 7 HOH A 62 662 146 HOH HOH . J 7 HOH A 63 663 76 HOH HOH . J 7 HOH A 64 664 155 HOH HOH . J 7 HOH A 65 665 144 HOH HOH . J 7 HOH A 66 666 64 HOH HOH . J 7 HOH A 67 667 154 HOH HOH . J 7 HOH A 68 668 53 HOH HOH . J 7 HOH A 69 669 158 HOH HOH . J 7 HOH A 70 670 115 HOH HOH . J 7 HOH A 71 671 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GN1 . . . C 3 -5.094 8.11 3.595 1 30.89 ? C1 GN1 601 B 1 HETATM 2 O OP1 GN1 . . . C 3 -4.404 6.049 1.7 1 40.66 ? OP1 GN1 601 B 1 HETATM 3 P P GN1 . . . C 3 -5.742 5.836 2.316 1 35.72 ? P GN1 601 B 1 HETATM 4 O OP2 GN1 . . . C 3 -5.779 4.542 3.044 1 42.82 ? OP2 GN1 601 B 1 HETATM 5 O OP3 GN1 . . . C 3 -6.909 6.03 1.411 1 30.08 ? OP3 GN1 601 B 1 HETATM 6 C C2 GN1 . . . C 3 -5.104 8.464 5.092 1 30.53 ? C2 GN1 601 B 1 HETATM 7 C C3 GN1 . . . C 3 -6.496 8.927 5.519 1 29.51 ? C3 GN1 601 B 1 HETATM 8 C C4 GN1 . . . C 3 -6.851 10.145 4.671 1 30.44 ? C4 GN1 601 B 1 HETATM 9 C C5 GN1 . . . C 3 -6.76 9.817 3.179 1 29.66 ? C5 GN1 601 B 1 HETATM 10 C C6 GN1 . . . C 3 -6.872 11.063 2.316 1 32.01 ? C6 GN1 601 B 1 HETATM 11 C C8 GN1 . . . C 3 -3.058 6.105 7.216 1 33.37 ? C8 GN1 601 B 1 HETATM 12 O O1 GN1 . . . C 3 -5.987 7.046 3.372 1 34.43 ? O1 GN1 601 B 1 HETATM 13 O O3 GN1 . . . C 3 -6.494 9.216 6.925 1 28.01 ? O3 GN1 601 B 1 HETATM 14 O O4 GN1 . . . C 3 -8.16 10.615 5 1 32.57 ? O4 GN1 601 B 1 HETATM 15 O O5 GN1 . . . C 3 -5.492 9.214 2.814 1 27.91 ? O5 GN1 601 B 1 HETATM 16 N N2 GN1 . . . C 3 -4.62 7.386 5.919 1 31.1 ? N2 GN1 601 B 1 HETATM 17 C C7 GN1 . . . C 3 -3.354 7.282 6.342 1 31.81 ? C7 GN1 601 B 1 HETATM 18 O O6 GN1 . . . C 3 -7.062 10.741 0.939 1 28.56 ? O6 GN1 601 B 1 HETATM 19 O O7 GN1 . . . C 3 -2.49 8.083 6.025 1 28.18 ? O7 GN1 601 B 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 66 _model_server_stats.create_model_time_ms 53 _model_server_stats.query_time_ms 1557 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 19 #