data_9G85 # _model_server_result.job_id b7LWCXxB6hgoDezjHKj7bw _model_server_result.datetime_utc '2025-08-13 13:48:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9g85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":506}' # _entry.id 9G85 # _exptl.entry_id 9G85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9G85 _cell.length_a 133.001 _cell.length_b 133.001 _cell.length_c 510.767 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9G85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,O,P,Q,R,S,T,Y,AA 1 1 B,D,I,J,K,L,M,N,U,V,W,X,Z,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 T N N ? 4 U N N ? 4 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 10 A ASP 10 1_555 G MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc2 A OD2 ASP 53 A ASP 53 1_555 G MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc3 A O MET 55 A MET 55 1_555 G MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc4 A OD2 ASP 327 A ASP 327 1_555 H MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc5 A O ILE 328 A ILE 328 1_555 H MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc6 A OE1 GLU 370 A GLU 370 1_555 H MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc7 A OE2 GLU 370 A GLU 370 1_555 H MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc8 F O3B G4P . A G4P 502 1_555 H MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.872 ? metalc ? metalc9 F O2A G4P . A G4P 502 1_555 H MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc10 B OD1 ASP 10 B ASP 10 1_555 M MG MG . B MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc11 B OD2 ASP 53 B ASP 53 1_555 M MG MG . B MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc12 B O MET 55 B MET 55 1_555 M MG MG . B MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc13 B OD1 ASP 327 B ASP 327 1_555 N MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc14 B O ILE 328 B ILE 328 1_555 N MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc15 K O3A G4P . B G4P 503 1_555 N MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc16 C OD1 ASP 10 C ASP 10 1_555 O MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc17 C OD2 ASP 53 C ASP 53 1_555 O MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc18 C O MET 55 C MET 55 1_555 O MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc19 C OD1 ASP 327 C ASP 327 1_555 T MG MG . C MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc20 C O ILE 328 C ILE 328 1_555 T MG MG . C MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc21 C OE1 GLU 370 C GLU 370 1_555 T MG MG . C MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc22 S O1B G4P . C G4P 505 1_555 T MG MG . C MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc23 S O1A G4P . C G4P 505 1_555 T MG MG . C MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc24 D OD1 ASP 10 D ASP 10 1_555 U MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc25 D OD2 ASP 53 D ASP 53 1_555 U MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc26 D O MET 55 D MET 55 1_555 U MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc27 D OD1 ASP 327 D ASP 327 1_555 X MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc28 D O ILE 328 D ILE 328 1_555 X MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc29 D OE1 GLU 370 D GLU 370 1_555 X MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc30 W O3B G4P . D G4P 503 1_555 X MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc31 W O1A G4P . D G4P 503 1_555 X MG MG . D MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9G85 _atom_sites.fract_transf_matrix[1][1] 0.007519 _atom_sites.fract_transf_matrix[1][2] 0.004341 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001958 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 C2E A 1 501 503 C2E C2E . F 3 G4P A 1 502 506 G4P G4P . G 4 MG A 1 503 1 MG MG . H 4 MG A 1 504 7 MG MG . I 2 C2E B 1 501 503 C2E C2E . J 2 C2E B 1 502 505 C2E C2E . K 3 G4P B 1 503 506 G4P G4P . L 2 C2E B 1 504 503 C2E C2E . M 4 MG B 1 505 11 MG MG . N 4 MG B 1 506 13 MG MG . O 4 MG C 1 501 500 MG MG . P 2 C2E C 1 502 505 C2E C2E . Q 2 C2E C 1 503 503 C2E C2E . R 2 C2E C 1 504 505 C2E C2E . S 3 G4P C 1 505 506 G4P G4P . T 4 MG C 1 506 9 MG MG . U 4 MG D 1 501 500 MG MG . V 2 C2E D 1 502 505 C2E C2E . W 3 G4P D 1 503 506 G4P G4P . X 4 MG D 1 504 12 MG MG . Y 5 HOH A 1 601 27 HOH HOH . Y 5 HOH A 2 602 26 HOH HOH . Y 5 HOH A 3 603 24 HOH HOH . Y 5 HOH A 4 604 32 HOH HOH . Y 5 HOH A 5 605 9 HOH HOH . Y 5 HOH A 6 606 1 HOH HOH . Y 5 HOH A 7 607 13 HOH HOH . Z 5 HOH B 1 601 28 HOH HOH . Z 5 HOH B 2 602 17 HOH HOH . Z 5 HOH B 3 603 19 HOH HOH . Z 5 HOH B 4 604 37 HOH HOH . Z 5 HOH B 5 605 23 HOH HOH . Z 5 HOH B 6 606 3 HOH HOH . Z 5 HOH B 7 607 5 HOH HOH . Z 5 HOH B 8 608 33 HOH HOH . Z 5 HOH B 9 609 15 HOH HOH . AA 5 HOH C 1 601 34 HOH HOH . AA 5 HOH C 2 602 29 HOH HOH . AA 5 HOH C 3 603 2 HOH HOH . AA 5 HOH C 4 604 4 HOH HOH . AA 5 HOH C 5 605 10 HOH HOH . AA 5 HOH C 6 606 6 HOH HOH . BA 5 HOH D 1 601 21 HOH HOH . BA 5 HOH D 2 602 25 HOH HOH . BA 5 HOH D 3 603 30 HOH HOH . BA 5 HOH D 4 604 20 HOH HOH . BA 5 HOH D 5 605 18 HOH HOH . BA 5 HOH D 6 606 31 HOH HOH . BA 5 HOH D 7 607 16 HOH HOH . BA 5 HOH D 8 608 7 HOH HOH . BA 5 HOH D 9 609 36 HOH HOH . BA 5 HOH D 10 610 14 HOH HOH . BA 5 HOH D 11 611 8 HOH HOH . BA 5 HOH D 12 612 11 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 4 _atom_site.Cartn_x 78.792 _atom_site.Cartn_y 38.021 _atom_site.Cartn_z 118.179 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 506 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #