data_9GC9 # _model_server_result.job_id LCe7d913TKh27RxKaqsjRg _model_server_result.datetime_utc '2024-11-29 12:39:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gc9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 9GC9 # _exptl.entry_id 9GC9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GC9 _cell.length_a 73.935 _cell.length_b 73.935 _cell.length_c 48.909 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GC9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 AbA 1 NAG AbA 301 NAG 2 n B NAG 2 AbA 2 NAG AcA 303 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 AAA CYS 42 1_555 A SG CYS 46 AAA CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 A SG CYS 123 AAA CYS 136 1_555 A SG CYS 188 AAA CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 154 AAA CYS 168 1_555 A SG CYS 167 AAA CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 59 AAA ASN 72 1_555 B C1 NAG . AbA NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale2 A ND2 ASN 82 AAA ASN 95 1_555 C C1 NAG . AAA NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale3 B O4 NAG . AbA NAG 1 1_555 B C1 NAG . AbA NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? metalc ? metalc1 A NE2 HIS 10 AAA HIS 25 1_555 E ZN ZN . AAA ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc2 A OE2 GLU 64 AAA GLU 78 1_555 E ZN ZN . AAA ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc3 A OE2 GLU 71 AAA GLU 84 1_555 E ZN ZN . AAA ZN 303 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc4 A NZ LYS 96 AAA LYS 109 1_555 E ZN ZN . AAA ZN 303 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9GC9 _atom_sites.fract_transf_matrix[1][1] 0.013525 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013525 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020446 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG AAA 1 301 302 NAG NAG . D 4 A1IJ3 AAA 1 302 304 A1IJ3 LIG . E 5 ZN AAA 1 303 1 ZN ZN . F 6 HOH AAA 1 401 181 HOH HOH . F 6 HOH AAA 2 402 150 HOH HOH . F 6 HOH AAA 3 403 136 HOH HOH . F 6 HOH AAA 4 404 114 HOH HOH . F 6 HOH AAA 5 405 56 HOH HOH . F 6 HOH AAA 6 406 142 HOH HOH . F 6 HOH AAA 7 407 38 HOH HOH . F 6 HOH AAA 8 408 32 HOH HOH . F 6 HOH AAA 9 409 170 HOH HOH . F 6 HOH AAA 10 410 18 HOH HOH . F 6 HOH AAA 11 411 29 HOH HOH . F 6 HOH AAA 12 412 10 HOH HOH . F 6 HOH AAA 13 413 79 HOH HOH . F 6 HOH AAA 14 414 84 HOH HOH . F 6 HOH AAA 15 415 27 HOH HOH . F 6 HOH AAA 16 416 196 HOH HOH . F 6 HOH AAA 17 417 126 HOH HOH . F 6 HOH AAA 18 418 57 HOH HOH . F 6 HOH AAA 19 419 49 HOH HOH . F 6 HOH AAA 20 420 14 HOH HOH . F 6 HOH AAA 21 421 137 HOH HOH . F 6 HOH AAA 22 422 3 HOH HOH . F 6 HOH AAA 23 423 134 HOH HOH . F 6 HOH AAA 24 424 39 HOH HOH . F 6 HOH AAA 25 425 207 HOH HOH . F 6 HOH AAA 26 426 11 HOH HOH . F 6 HOH AAA 27 427 64 HOH HOH . F 6 HOH AAA 28 428 2 HOH HOH . F 6 HOH AAA 29 429 28 HOH HOH . F 6 HOH AAA 30 430 33 HOH HOH . F 6 HOH AAA 31 431 111 HOH HOH . F 6 HOH AAA 32 432 4 HOH HOH . F 6 HOH AAA 33 433 88 HOH HOH . F 6 HOH AAA 34 434 19 HOH HOH . F 6 HOH AAA 35 435 26 HOH HOH . F 6 HOH AAA 36 436 195 HOH HOH . F 6 HOH AAA 37 437 45 HOH HOH . F 6 HOH AAA 38 438 175 HOH HOH . F 6 HOH AAA 39 439 22 HOH HOH . F 6 HOH AAA 40 440 36 HOH HOH . F 6 HOH AAA 41 441 188 HOH HOH . F 6 HOH AAA 42 442 62 HOH HOH . F 6 HOH AAA 43 443 102 HOH HOH . F 6 HOH AAA 44 444 21 HOH HOH . F 6 HOH AAA 45 445 9 HOH HOH . F 6 HOH AAA 46 446 17 HOH HOH . F 6 HOH AAA 47 447 15 HOH HOH . F 6 HOH AAA 48 448 166 HOH HOH . F 6 HOH AAA 49 449 129 HOH HOH . F 6 HOH AAA 50 450 194 HOH HOH . F 6 HOH AAA 51 451 97 HOH HOH . F 6 HOH AAA 52 452 184 HOH HOH . F 6 HOH AAA 53 453 186 HOH HOH . F 6 HOH AAA 54 454 54 HOH HOH . F 6 HOH AAA 55 455 133 HOH HOH . F 6 HOH AAA 56 456 159 HOH HOH . F 6 HOH AAA 57 457 63 HOH HOH . F 6 HOH AAA 58 458 161 HOH HOH . F 6 HOH AAA 59 459 43 HOH HOH . F 6 HOH AAA 60 460 6 HOH HOH . F 6 HOH AAA 61 461 183 HOH HOH . F 6 HOH AAA 62 462 86 HOH HOH . F 6 HOH AAA 63 463 185 HOH HOH . F 6 HOH AAA 64 464 117 HOH HOH . F 6 HOH AAA 65 465 52 HOH HOH . F 6 HOH AAA 66 466 44 HOH HOH . F 6 HOH AAA 67 467 116 HOH HOH . F 6 HOH AAA 68 468 201 HOH HOH . F 6 HOH AAA 69 469 101 HOH HOH . F 6 HOH AAA 70 470 128 HOH HOH . F 6 HOH AAA 71 471 203 HOH HOH . F 6 HOH AAA 72 472 131 HOH HOH . F 6 HOH AAA 73 473 51 HOH HOH . F 6 HOH AAA 74 474 67 HOH HOH . F 6 HOH AAA 75 475 16 HOH HOH . F 6 HOH AAA 76 476 82 HOH HOH . F 6 HOH AAA 77 477 124 HOH HOH . F 6 HOH AAA 78 478 58 HOH HOH . F 6 HOH AAA 79 479 65 HOH HOH . F 6 HOH AAA 80 480 158 HOH HOH . F 6 HOH AAA 81 481 1 HOH HOH . F 6 HOH AAA 82 482 41 HOH HOH . F 6 HOH AAA 83 483 125 HOH HOH . F 6 HOH AAA 84 484 72 HOH HOH . F 6 HOH AAA 85 485 164 HOH HOH . F 6 HOH AAA 86 486 168 HOH HOH . F 6 HOH AAA 87 487 162 HOH HOH . F 6 HOH AAA 88 488 208 HOH HOH . F 6 HOH AAA 89 489 40 HOH HOH . F 6 HOH AAA 90 490 104 HOH HOH . F 6 HOH AAA 91 491 187 HOH HOH . F 6 HOH AAA 92 492 34 HOH HOH . F 6 HOH AAA 93 493 71 HOH HOH . F 6 HOH AAA 94 494 204 HOH HOH . F 6 HOH AAA 95 495 123 HOH HOH . F 6 HOH AAA 96 496 109 HOH HOH . F 6 HOH AAA 97 497 74 HOH HOH . F 6 HOH AAA 98 498 23 HOH HOH . F 6 HOH AAA 99 499 25 HOH HOH . F 6 HOH AAA 100 500 13 HOH HOH . F 6 HOH AAA 101 501 48 HOH HOH . F 6 HOH AAA 102 502 213 HOH HOH . F 6 HOH AAA 103 503 66 HOH HOH . F 6 HOH AAA 104 504 83 HOH HOH . F 6 HOH AAA 105 505 35 HOH HOH . F 6 HOH AAA 106 506 30 HOH HOH . F 6 HOH AAA 107 507 138 HOH HOH . F 6 HOH AAA 108 508 146 HOH HOH . F 6 HOH AAA 109 509 202 HOH HOH . F 6 HOH AAA 110 510 94 HOH HOH . F 6 HOH AAA 111 511 209 HOH HOH . F 6 HOH AAA 112 512 171 HOH HOH . F 6 HOH AAA 113 513 143 HOH HOH . F 6 HOH AAA 114 514 92 HOH HOH . F 6 HOH AAA 115 515 37 HOH HOH . F 6 HOH AAA 116 516 78 HOH HOH . F 6 HOH AAA 117 517 20 HOH HOH . F 6 HOH AAA 118 518 193 HOH HOH . F 6 HOH AAA 119 519 53 HOH HOH . F 6 HOH AAA 120 520 189 HOH HOH . F 6 HOH AAA 121 521 77 HOH HOH . F 6 HOH AAA 122 522 182 HOH HOH . F 6 HOH AAA 123 523 81 HOH HOH . F 6 HOH AAA 124 524 55 HOH HOH . F 6 HOH AAA 125 525 12 HOH HOH . F 6 HOH AAA 126 526 180 HOH HOH . F 6 HOH AAA 127 527 60 HOH HOH . F 6 HOH AAA 128 528 47 HOH HOH . F 6 HOH AAA 129 529 69 HOH HOH . F 6 HOH AAA 130 530 50 HOH HOH . F 6 HOH AAA 131 531 157 HOH HOH . F 6 HOH AAA 132 532 132 HOH HOH . F 6 HOH AAA 133 533 100 HOH HOH . F 6 HOH AAA 134 534 24 HOH HOH . F 6 HOH AAA 135 535 135 HOH HOH . F 6 HOH AAA 136 536 7 HOH HOH . F 6 HOH AAA 137 537 156 HOH HOH . F 6 HOH AAA 138 538 120 HOH HOH . F 6 HOH AAA 139 539 93 HOH HOH . F 6 HOH AAA 140 540 127 HOH HOH . F 6 HOH AAA 141 541 85 HOH HOH . F 6 HOH AAA 142 542 205 HOH HOH . F 6 HOH AAA 143 543 118 HOH HOH . F 6 HOH AAA 144 544 141 HOH HOH . F 6 HOH AAA 145 545 99 HOH HOH . F 6 HOH AAA 146 546 172 HOH HOH . F 6 HOH AAA 147 547 178 HOH HOH . F 6 HOH AAA 148 548 91 HOH HOH . F 6 HOH AAA 149 549 76 HOH HOH . F 6 HOH AAA 150 550 160 HOH HOH . F 6 HOH AAA 151 551 90 HOH HOH . F 6 HOH AAA 152 552 75 HOH HOH . F 6 HOH AAA 153 553 73 HOH HOH . F 6 HOH AAA 154 554 163 HOH HOH . F 6 HOH AAA 155 555 5 HOH HOH . F 6 HOH AAA 156 556 105 HOH HOH . F 6 HOH AAA 157 557 130 HOH HOH . F 6 HOH AAA 158 558 149 HOH HOH . F 6 HOH AAA 159 559 174 HOH HOH . F 6 HOH AAA 160 560 112 HOH HOH . F 6 HOH AAA 161 561 214 HOH HOH . F 6 HOH AAA 162 562 8 HOH HOH . F 6 HOH AAA 163 563 190 HOH HOH . F 6 HOH AAA 164 564 31 HOH HOH . F 6 HOH AAA 165 565 153 HOH HOH . F 6 HOH AAA 166 566 115 HOH HOH . F 6 HOH AAA 167 567 96 HOH HOH . F 6 HOH AAA 168 568 122 HOH HOH . F 6 HOH AAA 169 569 206 HOH HOH . F 6 HOH AAA 170 570 110 HOH HOH . F 6 HOH AAA 171 571 80 HOH HOH . F 6 HOH AAA 172 572 165 HOH HOH . F 6 HOH AAA 173 573 177 HOH HOH . F 6 HOH AAA 174 574 42 HOH HOH . F 6 HOH AAA 175 575 113 HOH HOH . F 6 HOH AAA 176 576 119 HOH HOH . F 6 HOH AAA 177 577 70 HOH HOH . F 6 HOH AAA 178 578 108 HOH HOH . F 6 HOH AAA 179 579 192 HOH HOH . F 6 HOH AAA 180 580 139 HOH HOH . F 6 HOH AAA 181 581 144 HOH HOH . F 6 HOH AAA 182 582 107 HOH HOH . F 6 HOH AAA 183 583 121 HOH HOH . F 6 HOH AAA 184 584 191 HOH HOH . F 6 HOH AAA 185 585 145 HOH HOH . F 6 HOH AAA 186 586 176 HOH HOH . F 6 HOH AAA 187 587 59 HOH HOH . F 6 HOH AAA 188 588 197 HOH HOH . F 6 HOH AAA 189 589 103 HOH HOH . F 6 HOH AAA 190 590 98 HOH HOH . F 6 HOH AAA 191 591 87 HOH HOH . F 6 HOH AAA 192 592 155 HOH HOH . F 6 HOH AAA 193 593 179 HOH HOH . F 6 HOH AAA 194 594 140 HOH HOH . F 6 HOH AAA 195 595 210 HOH HOH . F 6 HOH AAA 196 596 68 HOH HOH . F 6 HOH AAA 197 597 148 HOH HOH . F 6 HOH AAA 198 598 167 HOH HOH . F 6 HOH AAA 199 599 89 HOH HOH . F 6 HOH AAA 200 600 151 HOH HOH . F 6 HOH AAA 201 601 211 HOH HOH . F 6 HOH AAA 202 602 200 HOH HOH . F 6 HOH AAA 203 603 95 HOH HOH . F 6 HOH AAA 204 604 147 HOH HOH . F 6 HOH AAA 205 605 173 HOH HOH . F 6 HOH AAA 206 606 212 HOH HOH . F 6 HOH AAA 207 607 152 HOH HOH . F 6 HOH AAA 208 608 198 HOH HOH . F 6 HOH AAA 209 609 106 HOH HOH . F 6 HOH AAA 210 610 169 HOH HOH . F 6 HOH AAA 211 611 46 HOH HOH . F 6 HOH AAA 212 612 154 HOH HOH . F 6 HOH AAA 213 613 199 HOH HOH . F 6 HOH AAA 214 614 61 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -4.981 _atom_site.Cartn_y -38.791 _atom_site.Cartn_z -18.456 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.12 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 303 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #