data_9GCX
#
_model_server_result.job_id            MUb4GqrkJBMhzYbcXumbWA 
_model_server_result.datetime_utc      '2025-01-22 20:01:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9gcx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":508}' 
#
_entry.id    9GCX 
#
_exptl.entry_id    9GCX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          15 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9GCX 
_cell.length_a            210.082 
_cell.length_b            210.082 
_cell.length_c            344.844 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9GCX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    22-meric 
_pdbx_struct_assembly.oligomeric_count      22 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_445 -y-1,-x-1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -105.041 -181.936349 57.474 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      15 
_struct_asym.id                             U 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 222 E CYS 144 1_555 E SG CYS 238 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf2 H SG CYS 55 H CYS 24 1_555 H SG CYS 99 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf3 H SG CYS 71 H CYS 40 1_555 H SG CYS 85 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
covale ? covale1 D SG CYS 121 D CYS 37 1_555 V CAB HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.759 ? 
covale ? covale2 D SG CYS 124 D CYS 40 1_555 V CAC HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? 
metalc ? metalc1 C NE2 HIS 83 C HIS 83 1_555 N FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc2 C NE2 HIS 97 C HIS 97 1_555 O FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc3 C NE2 HIS 182 C HIS 182 1_555 N FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? 
metalc ? metalc4 C NE2 HIS 196 C HIS 196 1_555 O FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc5 D NE2 HIS 125 D HIS 41 1_555 V FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc6 D SD MET 244 D MET 160 1_555 V FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc7 E SG CYS 217 E CYS 139 1_555 X FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc8 E ND1 HIS 219 E HIS 141 1_555 X FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc9 E SG CYS 236 E CYS 158 1_555 X FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc10 E ND1 HIS 239 E HIS 161 1_555 X FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 670 n n 
C1B O1B LMT sing 671 n n 
C1B O5B LMT sing 672 n n 
C1B H1B LMT sing 673 n n 
C2B C3B LMT sing 674 n n 
C2B O2B LMT sing 675 n n 
C2B H2B LMT sing 676 n n 
C3B C4B LMT sing 677 n n 
C3B O3B LMT sing 678 n n 
C3B H3B LMT sing 679 n n 
C4B C5B LMT sing 680 n n 
C4B O4' LMT sing 681 n n 
C4B H4B LMT sing 682 n n 
C5B C6B LMT sing 683 n n 
C5B O5B LMT sing 684 n n 
C5B H5B LMT sing 685 n n 
C6B O6B LMT sing 686 n n 
C6B "H6'2" LMT sing 687 n n 
C6B "H6'1" LMT sing 688 n n 
O1B C4' LMT sing 689 n n 
O2B H2O1 LMT sing 690 n n 
O3B H3O1 LMT sing 691 n n 
O4' H4O1 LMT sing 692 n n 
O6B H6B LMT sing 693 n n 
C1' C2' LMT sing 694 n n 
C1' O1' LMT sing 695 n n 
C1' O5' LMT sing 696 n n 
C1' H1' LMT sing 697 n n 
C2' C3' LMT sing 698 n n 
C2' O2' LMT sing 699 n n 
C2' H2' LMT sing 700 n n 
C3' C4' LMT sing 701 n n 
C3' O3' LMT sing 702 n n 
C3' H3' LMT sing 703 n n 
C4' C5' LMT sing 704 n n 
C4' H4' LMT sing 705 n n 
C5' C6' LMT sing 706 n n 
C5' O5' LMT sing 707 n n 
C5' H5' LMT sing 708 n n 
C6' O6' LMT sing 709 n n 
C6' H6D LMT sing 710 n n 
C6' H6E LMT sing 711 n n 
O1' C1 LMT sing 712 n n 
O2' H2O2 LMT sing 713 n n 
O3' H3O2 LMT sing 714 n n 
O6' H6' LMT sing 715 n n 
C1 C2 LMT sing 716 n n 
C1 H12 LMT sing 717 n n 
C1 H11 LMT sing 718 n n 
C2 C3 LMT sing 719 n n 
C2 H22 LMT sing 720 n n 
C2 H21 LMT sing 721 n n 
C3 C4 LMT sing 722 n n 
C3 H32 LMT sing 723 n n 
C3 H31 LMT sing 724 n n 
C4 C5 LMT sing 725 n n 
C4 H42 LMT sing 726 n n 
C4 H41 LMT sing 727 n n 
C5 C6 LMT sing 728 n n 
C5 H52 LMT sing 729 n n 
C5 H51 LMT sing 730 n n 
C6 C7 LMT sing 731 n n 
C6 H62 LMT sing 732 n n 
C6 H61 LMT sing 733 n n 
C7 C8 LMT sing 734 n n 
C7 H72 LMT sing 735 n n 
C7 H71 LMT sing 736 n n 
C8 C9 LMT sing 737 n n 
C8 H82 LMT sing 738 n n 
C8 H81 LMT sing 739 n n 
C9 C10 LMT sing 740 n n 
C9 H92 LMT sing 741 n n 
C9 H91 LMT sing 742 n n 
C10 C11 LMT sing 743 n n 
C10 H102 LMT sing 744 n n 
C10 H101 LMT sing 745 n n 
C11 C12 LMT sing 746 n n 
C11 H112 LMT sing 747 n n 
C11 H111 LMT sing 748 n n 
C12 H123 LMT sing 749 n n 
C12 H122 LMT sing 750 n n 
C12 H121 LMT sing 751 n n 
#
_atom_sites.entry_id                     9GCX 
_atom_sites.fract_transf_matrix[1][1]    0.00476 
_atom_sites.fract_transf_matrix[1][2]    0.002748 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005496 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0029 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
L 11 LOP A 1 501 501 LOP LOP . 
M 12 CDL A 1 502 502 CDL CDL . 
N 13 HEM C 1 501 501 HEM HEM . 
O 13 HEM C 1 502 502 HEM HEM . 
P 11 LOP C 1 503 503 LOP LOP . 
Q 12 CDL C 1 504 504 CDL CDL . 
R 14 A1IKG C 1 505 509 A1IKG SG1 . 
S 11 LOP C 1 506 512 LOP LOP . 
T 11 LOP C 1 507 513 LOP LOP . 
U 15 LMT C 1 508 515 LMT LMT . 
V 16 HEC D 1 501 501 HEC HEC . 
W 12 CDL D 1 502 502 CDL CDL . 
X 17 FES E 1 201 201 FES FES . 
Y 11 LOP E 1 202 201 LOP LOP . 
Z 18 PSC E 1 203 202 PSC PSC . 
AA 19 SO4 F 1 201 3 SO4 SO4 . 
BA 11 LOP G 1 101 514 LOP LOP . 
CA 19 SO4 G 1 102 1 SO4 SO4 . 
DA 19 SO4 G 1 103 2 SO4 SO4 . 
EA 20 HOH A 1 601 301 HOH HOH . 
EA 20 HOH A 2 602 521 HOH HOH . 
EA 20 HOH A 3 603 518 HOH HOH . 
FA 20 HOH B 1 501 522 HOH HOH . 
GA 20 HOH C 1 601 16 HOH HOH . 
GA 20 HOH C 2 602 254 HOH HOH . 
GA 20 HOH C 3 603 523 HOH HOH . 
GA 20 HOH C 4 604 516 HOH HOH . 
HA 20 HOH E 1 301 514 HOH HOH . 
IA 20 HOH F 1 301 519 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . U 15 -41.091 -72.778 68.455 1 214.37 ? C1B LMT 508 C 1 
HETATM 2 C C2B LMT . . . U 15 -42.545 -72.425 68.777 1 200.47 ? C2B LMT 508 C 1 
HETATM 3 C C3B LMT . . . U 15 -43.298 -73.666 69.316 1 178.33 ? C3B LMT 508 C 1 
HETATM 4 C C4B LMT . . . U 15 -42.89 -74.933 68.574 1 183.45 ? C4B LMT 508 C 1 
HETATM 5 C C5B LMT . . . U 15 -41.362 -75.169 68.618 1 192.2 ? C5B LMT 508 C 1 
HETATM 6 C C6B LMT . . . U 15 -40.733 -75.491 67.276 1 194.28 ? C6B LMT 508 C 1 
HETATM 7 O O1B LMT . . . U 15 -40.236 -71.732 68.854 1 230.91 ? O1B LMT 508 C 1 
HETATM 8 O O2B LMT . . . U 15 -42.591 -71.298 69.653 1 206.67 ? O2B LMT 508 C 1 
HETATM 9 O O3B LMT . . . U 15 -44.729 -73.548 69.292 1 139.75 ? O3B LMT 508 C 1 
HETATM 10 O O4' LMT . . . U 15 -43.563 -76.01 69.21 1 186.99 ? O4' LMT 508 C 1 
HETATM 11 O O5B LMT . . . U 15 -40.699 -73.986 69.11 1 208.86 ? O5B LMT 508 C 1 
HETATM 12 O O6B LMT . . . U 15 -40.719 -76.899 67.02 1 204.67 ? O6B LMT 508 C 1 
HETATM 13 C C1' LMT . . . U 15 -37.334 -70.59 70.586 1 220.09 ? C1' LMT 508 C 1 
HETATM 14 C C2' LMT . . . U 15 -38.215 -69.656 69.752 1 235.66 ? C2' LMT 508 C 1 
HETATM 15 C C3' LMT . . . U 15 -38.502 -70.242 68.338 1 250.05 ? C3' LMT 508 C 1 
HETATM 16 C C4' LMT . . . U 15 -38.876 -71.72 68.391 1 240.55 ? C4' LMT 508 C 1 
HETATM 17 C C5' LMT . . . U 15 -37.927 -72.526 69.295 1 238.08 ? C5' LMT 508 C 1 
HETATM 18 C C6' LMT . . . U 15 -37.288 -73.742 68.634 1 225.28 ? C6' LMT 508 C 1 
HETATM 19 O O1' LMT . . . U 15 -36.271 -69.904 71.218 1 201.74 ? O1' LMT 508 C 1 
HETATM 20 O O2' LMT . . . U 15 -39.432 -69.363 70.441 1 234.65 ? O2' LMT 508 C 1 
HETATM 21 O O3' LMT . . . U 15 -37.395 -70.047 67.464 1 296.78 ? O3' LMT 508 C 1 
HETATM 22 O O5' LMT . . . U 15 -36.852 -71.68 69.811 1 236.31 ? O5' LMT 508 C 1 
HETATM 23 O O6' LMT . . . U 15 -36.805 -73.514 67.303 1 206.14 ? O6' LMT 508 C 1 
HETATM 24 C C1 LMT . . . U 15 -35.558 -68.917 70.446 1 202.76 ? C1 LMT 508 C 1 
HETATM 25 C C2 LMT . . . U 15 -35.602 -67.573 71.15 1 206.91 ? C2 LMT 508 C 1 
HETATM 26 C C3 LMT . . . U 15 -36.34 -66.477 70.364 1 189.73 ? C3 LMT 508 C 1 
HETATM 27 C C4 LMT . . . U 15 -36.013 -65.054 70.829 1 167.07 ? C4 LMT 508 C 1 
HETATM 28 C C5 LMT . . . U 15 -34.653 -64.555 70.372 1 157.09 ? C5 LMT 508 C 1 
HETATM 29 C C6 LMT . . . U 15 -33.479 -65.149 71.147 1 161.86 ? C6 LMT 508 C 1 
HETATM 30 C C7 LMT . . . U 15 -33.31 -64.614 72.575 1 178.73 ? C7 LMT 508 C 1 
HETATM 31 C C8 LMT . . . U 15 -33.741 -65.552 73.697 1 168.05 ? C8 LMT 508 C 1 
HETATM 32 C C9 LMT . . . U 15 -33.584 -64.972 75.111 1 155.66 ? C9 LMT 508 C 1 
HETATM 33 C C10 LMT . . . U 15 -34.457 -63.759 75.45 1 151.79 ? C10 LMT 508 C 1 
HETATM 34 C C11 LMT . . . U 15 -35.975 -63.854 75.277 1 141.47 ? C11 LMT 508 C 1 
HETATM 35 C C12 LMT . . . U 15 -36.659 -63.193 74.09 1 127.43 ? C12 LMT 508 C 1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           236 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           35 
#