data_9GIE # _model_server_result.job_id 7tXCTWWwu1AnJubrHzB4ug _model_server_result.datetime_utc '2024-12-01 01:49:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 9GIE # _exptl.entry_id 9GIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 353.415 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-azanyl-3-[[4-(2-ethylphenyl)-2,3-dihydro-1~{H}-indol-2-yl]carbonylamino]propanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GIE _cell.length_a 72.448 _cell.length_b 78.868 _cell.length_c 91.984 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 27 A CYS 420 1_555 A SG CYS 61 A CYS 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 A SG CYS 43 A CYS 436 1_555 A SG CYS 62 A CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf3 B SG CYS 27 B CYS 420 1_555 B SG CYS 61 B CYS 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 B SG CYS 43 B CYS 436 1_555 B SG CYS 62 B CYS 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? disulf ? disulf5 B SG CYS 235 B CYS 744 1_555 B SG CYS 289 B CYS 798 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'C20 H23 N3 O3' _chem_comp.formula_weight 353.415 _chem_comp.id A1ILS _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-azanyl-3-[[4-(2-ethylphenyl)-2,3-dihydro-1~{H}-indol-2-yl]carbonylamino]propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C1 A1ILS sing 1 n n C1 C2 A1ILS sing 2 n n C2 C3 A1ILS doub 3 n y C2 C7 A1ILS sing 4 n y C3 C4 A1ILS sing 5 n y C10 C11 A1ILS doub 6 n y C10 C9 A1ILS sing 7 n y C11 C12 A1ILS sing 8 n y C9 C8 A1ILS doub 9 n y C12 N16 A1ILS sing 10 n n C12 C13 A1ILS doub 11 n y C8 C13 A1ILS sing 12 n y C8 C7 A1ILS sing 13 n n N16 C15 A1ILS sing 14 n n C13 C14 A1ILS sing 15 n n C7 C6 A1ILS doub 16 n y C15 C14 A1ILS sing 17 n n C15 C17 A1ILS sing 18 n n C4 C5 A1ILS doub 19 n y C17 O19 A1ILS doub 20 n n C17 N18 A1ILS sing 21 n n N18 C20 A1ILS sing 22 n n C20 C21 A1ILS sing 23 n n C6 C5 A1ILS sing 24 n y C21 N22 A1ILS sing 25 n n C21 C23 A1ILS sing 26 n n O25 C23 A1ILS doub 27 n n C23 O24 A1ILS sing 28 n n C1 H12 A1ILS sing 29 n n C1 H1 A1ILS sing 30 n n C3 H3 A1ILS sing 31 n n C11 H11 A1ILS sing 32 n n C14 H14 A1ILS sing 33 n n C14 H2 A1ILS sing 34 n n C4 H4 A1ILS sing 35 n n C5 H5 A1ILS sing 36 n n C6 H6 A1ILS sing 37 n n C9 H9 A1ILS sing 38 n n C10 H10 A1ILS sing 39 n n C15 H7 A1ILS sing 40 n n N16 HN16 A1ILS sing 41 n n N18 HN18 A1ILS sing 42 n n C20 H20 A1ILS sing 43 n n C20 H201 A1ILS sing 44 n n C21 H21 A1ILS sing 45 n n N22 HN21 A1ILS sing 46 n n N22 HN23 A1ILS sing 47 n n O24 H8 A1ILS sing 48 n n C28 H28 A1ILS sing 49 n n C28 H281 A1ILS sing 50 n n C28 H282 A1ILS sing 51 n n # _atom_sites.entry_id 9GIE _atom_sites.fract_transf_matrix[1][1] 0.013803 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012679 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1ILS A 1 901 2 A1ILS 315 . D 2 A1ILS B 1 901 1 A1ILS 315 . E 3 HOH A 1 1001 41 HOH HOH . E 3 HOH A 2 1002 26 HOH HOH . E 3 HOH A 3 1003 36 HOH HOH . E 3 HOH A 4 1004 29 HOH HOH . E 3 HOH A 5 1005 17 HOH HOH . E 3 HOH A 6 1006 8 HOH HOH . E 3 HOH A 7 1007 34 HOH HOH . E 3 HOH A 8 1008 53 HOH HOH . E 3 HOH A 9 1009 47 HOH HOH . E 3 HOH A 10 1010 43 HOH HOH . E 3 HOH A 11 1011 24 HOH HOH . E 3 HOH A 12 1012 20 HOH HOH . E 3 HOH A 13 1013 52 HOH HOH . E 3 HOH A 14 1014 40 HOH HOH . E 3 HOH A 15 1015 38 HOH HOH . E 3 HOH A 16 1016 11 HOH HOH . E 3 HOH A 17 1017 9 HOH HOH . E 3 HOH A 18 1018 33 HOH HOH . E 3 HOH A 19 1019 50 HOH HOH . E 3 HOH A 20 1020 18 HOH HOH . E 3 HOH A 21 1021 23 HOH HOH . E 3 HOH A 22 1022 55 HOH HOH . E 3 HOH A 23 1023 4 HOH HOH . E 3 HOH A 24 1024 13 HOH HOH . E 3 HOH A 25 1025 2 HOH HOH . E 3 HOH A 26 1026 25 HOH HOH . E 3 HOH A 27 1027 51 HOH HOH . E 3 HOH A 28 1028 30 HOH HOH . E 3 HOH A 29 1029 12 HOH HOH . E 3 HOH A 30 1030 46 HOH HOH . E 3 HOH A 31 1031 19 HOH HOH . F 3 HOH B 1 1001 42 HOH HOH . F 3 HOH B 2 1002 35 HOH HOH . F 3 HOH B 3 1003 28 HOH HOH . F 3 HOH B 4 1004 44 HOH HOH . F 3 HOH B 5 1005 1 HOH HOH . F 3 HOH B 6 1006 39 HOH HOH . F 3 HOH B 7 1007 32 HOH HOH . F 3 HOH B 8 1008 54 HOH HOH . F 3 HOH B 9 1009 14 HOH HOH . F 3 HOH B 10 1010 6 HOH HOH . F 3 HOH B 11 1011 37 HOH HOH . F 3 HOH B 12 1012 31 HOH HOH . F 3 HOH B 13 1013 49 HOH HOH . F 3 HOH B 14 1014 7 HOH HOH . F 3 HOH B 15 1015 27 HOH HOH . F 3 HOH B 16 1016 15 HOH HOH . F 3 HOH B 17 1017 10 HOH HOH . F 3 HOH B 18 1018 21 HOH HOH . F 3 HOH B 19 1019 48 HOH HOH . F 3 HOH B 20 1020 16 HOH HOH . F 3 HOH B 21 1021 45 HOH HOH . F 3 HOH B 22 1022 3 HOH HOH . F 3 HOH B 23 1023 5 HOH HOH . F 3 HOH B 24 1024 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1ILS . . . D 2 -35.979 9.968 -24.948 1 37.42 ? C1 A1ILS 901 B 1 HETATM 2 C C2 A1ILS . . . D 2 -35.955 10.491 -23.535 1 41.82 ? C2 A1ILS 901 B 1 HETATM 3 C C3 A1ILS . . . D 2 -35.946 11.874 -23.344 1 45.53 ? C3 A1ILS 901 B 1 HETATM 4 C C8 A1ILS . . . D 2 -36.038 8.126 -22.471 1 37.49 ? C8 A1ILS 901 B 1 HETATM 5 C C11 A1ILS . . . D 2 -36.134 5.291 -22.817 1 36.43 ? C11 A1ILS 901 B 1 HETATM 6 C C12 A1ILS . . . D 2 -37.31 5.941 -22.513 1 36.8 ? C12 A1ILS 901 B 1 HETATM 7 C C13 A1ILS . . . D 2 -37.34 7.409 -22.334 1 33.3 ? C13 A1ILS 901 B 1 HETATM 8 C C14 A1ILS . . . D 2 -38.676 7.798 -22.056 1 31.75 ? C14 A1ILS 901 B 1 HETATM 9 C C23 A1ILS . . . D 2 -43.168 6.043 -19.122 1 34.29 ? C23 A1ILS 901 B 1 HETATM 10 C C4 A1ILS . . . D 2 -35.947 12.386 -22.038 1 43.32 ? C4 A1ILS 901 B 1 HETATM 11 C C5 A1ILS . . . D 2 -35.946 11.557 -20.924 1 41.53 ? C5 A1ILS 901 B 1 HETATM 12 C C6 A1ILS . . . D 2 -35.968 10.171 -21.065 1 38.62 ? C6 A1ILS 901 B 1 HETATM 13 C C7 A1ILS . . . D 2 -35.987 9.601 -22.322 1 37.17 ? C7 A1ILS 901 B 1 HETATM 14 C C9 A1ILS . . . D 2 -34.884 7.39 -22.774 1 34.9 ? C9 A1ILS 901 B 1 HETATM 15 C C10 A1ILS . . . D 2 -34.953 6.009 -22.958 1 38.34 ? C10 A1ILS 901 B 1 HETATM 16 C C15 A1ILS . . . D 2 -39.404 6.589 -22.067 1 35.34 ? C15 A1ILS 901 B 1 HETATM 17 N N16 A1ILS . . . D 2 -38.593 5.532 -22.342 1 38.46 ? N16 A1ILS 901 B 1 HETATM 18 C C17 A1ILS . . . D 2 -40.86 6.467 -21.824 1 38.4 ? C17 A1ILS 901 B 1 HETATM 19 N N18 A1ILS . . . D 2 -41.377 5.264 -21.618 1 39.6 ? N18 A1ILS 901 B 1 HETATM 20 O O19 A1ILS . . . D 2 -41.554 7.463 -21.798 1 40.69 ? O19 A1ILS 901 B 1 HETATM 21 C C20 A1ILS . . . D 2 -42.787 5.002 -21.377 1 34.11 ? C20 A1ILS 901 B 1 HETATM 22 C C21 A1ILS . . . D 2 -43.072 4.744 -19.914 1 30.62 ? C21 A1ILS 901 B 1 HETATM 23 N N22 A1ILS . . . D 2 -42.031 3.874 -19.37 1 29.05 ? N22 A1ILS 901 B 1 HETATM 24 O O24 A1ILS . . . D 2 -42.822 6.132 -17.955 1 30.92 ? O24 A1ILS 901 B 1 HETATM 25 O O25 A1ILS . . . D 2 -43.764 7.222 -19.712 1 30.96 ? O25 A1ILS 901 B 1 HETATM 26 C C28 A1ILS . . . D 2 -37.432 9.965 -25.324 1 36.49 ? C28 A1ILS 901 B 1 HETATM 27 H H12 A1ILS . . . D 2 -35.417 10.632 -25.608 1 38.12 ? H12 A1ILS 901 B 1 HETATM 28 H H1 A1ILS . . . D 2 -35.557 8.964 -25.014 1 38.1 ? H1 A1ILS 901 B 1 HETATM 29 H H3 A1ILS . . . D 2 -35.921 12.537 -24.194 1 44.25 ? H3 A1ILS 901 B 1 HETATM 30 H H11 A1ILS . . . D 2 -36.13 4.216 -22.948 1 36.9 ? H11 A1ILS 901 B 1 HETATM 31 H H14 A1ILS . . . D 2 -38.902 8.654 -22.594 0 35.69 ? H14 A1ILS 901 B 1 HETATM 32 H H4 A1ILS . . . D 2 -35.907 13.458 -21.895 1 43.3 ? H4 A1ILS 901 B 1 HETATM 33 H H5 A1ILS . . . D 2 -35.941 11.995 -19.936 1 41.17 ? H5 A1ILS 901 B 1 HETATM 34 H H6 A1ILS . . . D 2 -35.995 9.539 -20.186 1 38.97 ? H6 A1ILS 901 B 1 HETATM 35 H H9 A1ILS . . . D 2 -33.937 7.9 -22.891 1 36.22 ? H9 A1ILS 901 B 1 HETATM 36 H H10 A1ILS . . . D 2 -34.043 5.465 -23.17 1 37.17 ? H10 A1ILS 901 B 1 HETATM 37 H HN16 A1ILS . . . D 2 -38.897 4.541 -22.411 1 37.36 ? HN16 A1ILS 901 B 1 HETATM 38 H HN18 A1ILS . . . D 2 -40.772 4.461 -21.636 1 37.84 ? HN18 A1ILS 901 B 1 HETATM 39 H H20 A1ILS . . . D 2 -43.052 4.105 -21.935 1 34.45 ? H20 A1ILS 901 B 1 HETATM 40 H H201 A1ILS . . . D 2 -43.404 5.818 -21.751 1 34.52 ? H201 A1ILS 901 B 1 HETATM 41 H H21 A1ILS . . . D 2 -44.035 4.219 -19.841 1 31.54 ? H21 A1ILS 901 B 1 HETATM 42 H HN21 A1ILS . . . D 2 -41.162 4.411 -19.219 1 29.62 ? HN21 A1ILS 901 B 1 HETATM 43 H HN23 A1ILS . . . D 2 -41.85 3.096 -20.025 1 29.65 ? HN23 A1ILS 901 B 1 HETATM 44 H H28 A1ILS . . . D 2 -37.835 10.938 -25.219 1 36.91 ? H28 A1ILS 901 B 1 HETATM 45 H H281 A1ILS . . . D 2 -37.958 9.294 -24.696 1 36.83 ? H281 A1ILS 901 B 1 HETATM 46 H H282 A1ILS . . . D 2 -37.531 9.653 -26.331 1 36.85 ? H282 A1ILS 901 B 1 HETATM 47 H HN22 A1ILS . . . D 2 -42.351 3.488 -18.467 1 29.58 ? HN22 A1ILS 901 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 47 #