data_9GIQ
#
_model_server_result.job_id            SUOvnNmNLVDhVD7wvsYIPQ 
_model_server_result.datetime_utc      '2025-06-23 01:42:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9giq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    9GIQ 
#
_exptl.entry_id    9GIQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              444.994 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[4-[(1~{R},3~{R})-3-azanylcyclopentyl]oxyphenyl]-~{N}-[(1~{S})-1-(4-chlorophenyl)-3-methyl-3-oxidanyl-butyl]propanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114.54 
_cell.angle_gamma         90 
_cell.entry_id            9GIQ 
_cell.length_a            45.792 
_cell.length_b            43.386 
_cell.length_c            43.627 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9GIQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             56 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              55 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            C30 
_struct_conn.ptnr2_label_comp_id            A1ILV 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             A1ILV 
_struct_conn.ptnr2_auth_seq_id              202 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.816 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C25 H33 Cl N2 O3' 
_chem_comp.formula_weight    444.994 
_chem_comp.id                A1ILV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[4-[(1~{R},3~{R})-3-azanylcyclopentyl]oxyphenyl]-~{N}-[(1~{S})-1-(4-chlorophenyl)-3-methyl-3-oxidanyl-butyl]propanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL12 C9 A1ILV sing 1 n n 
C10 C9 A1ILV doub 2 n y 
C10 C11 A1ILV sing 3 n y 
C9 C8 A1ILV sing 4 n y 
C30 C29 A1ILV sing 5 n n 
C11 C6 A1ILV doub 6 n y 
C16 C15 A1ILV doub 7 n y 
C16 C17 A1ILV sing 8 n y 
C23 C24 A1ILV sing 9 n n 
C23 C22 A1ILV sing 10 n n 
C15 C14 A1ILV sing 11 n y 
C8 C7 A1ILV doub 12 n y 
O20 C17 A1ILV sing 13 n n 
O20 C21 A1ILV sing 14 n n 
C24 N26 A1ILV sing 15 n n 
C24 C25 A1ILV sing 16 n n 
C29 C27 A1ILV sing 17 n n 
C6 C7 A1ILV sing 18 n y 
C6 C5 A1ILV sing 19 n n 
C17 C18 A1ILV doub 20 n y 
C22 C21 A1ILV sing 21 n n 
C27 O28 A1ILV doub 22 n n 
C27 N13 A1ILV sing 23 n n 
C14 N13 A1ILV sing 24 n n 
C14 C19 A1ILV doub 25 n y 
N13 C5 A1ILV sing 26 n n 
C21 C25 A1ILV sing 27 n n 
C5 C4 A1ILV sing 28 n n 
C18 C19 A1ILV sing 29 n y 
C4 C2 A1ILV sing 30 n n 
C3 C2 A1ILV sing 31 n n 
C1 C2 A1ILV sing 32 n n 
C2 O31 A1ILV sing 33 n n 
C1 H1 A1ILV sing 34 n n 
C1 H2 A1ILV sing 35 n n 
C1 H3 A1ILV sing 36 n n 
C3 H4 A1ILV sing 37 n n 
C3 H5 A1ILV sing 38 n n 
C3 H6 A1ILV sing 39 n n 
C7 H7 A1ILV sing 40 n n 
C8 H8 A1ILV sing 41 n n 
C10 H9 A1ILV sing 42 n n 
C11 H10 A1ILV sing 43 n n 
C15 H11 A1ILV sing 44 n n 
C16 H12 A1ILV sing 45 n n 
C19 H13 A1ILV sing 46 n n 
C21 H14 A1ILV sing 47 n n 
C22 H15 A1ILV sing 48 n n 
C22 H16 A1ILV sing 49 n n 
C24 H17 A1ILV sing 50 n n 
N26 H18 A1ILV sing 51 n n 
N26 H19 A1ILV sing 52 n n 
C30 H21 A1ILV sing 53 n n 
C30 H22 A1ILV sing 54 n n 
C30 H23 A1ILV sing 55 n n 
C4 H24 A1ILV sing 56 n n 
C4 H25 A1ILV sing 57 n n 
C5 H26 A1ILV sing 58 n n 
C18 H27 A1ILV sing 59 n n 
C23 H28 A1ILV sing 60 n n 
C23 H29 A1ILV sing 61 n n 
C25 H30 A1ILV sing 62 n n 
C25 H31 A1ILV sing 63 n n 
C29 H32 A1ILV sing 64 n n 
C29 H33 A1ILV sing 65 n n 
O31 H34 A1ILV sing 66 n n 
#
_atom_sites.entry_id                     9GIQ 
_atom_sites.fract_transf_matrix[1][1]    0.021838 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009971 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023049 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025198 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BUD A 1 201 202 BUD BUD . 
C 3 A1ILV A 1 202 1 A1ILV INH . 
D 4 HOH A 1 301 38 HOH HOH . 
D 4 HOH A 2 302 48 HOH HOH . 
D 4 HOH A 3 303 99 HOH HOH . 
D 4 HOH A 4 304 52 HOH HOH . 
D 4 HOH A 5 305 29 HOH HOH . 
D 4 HOH A 6 306 10 HOH HOH . 
D 4 HOH A 7 307 67 HOH HOH . 
D 4 HOH A 8 308 42 HOH HOH . 
D 4 HOH A 9 309 37 HOH HOH . 
D 4 HOH A 10 310 58 HOH HOH . 
D 4 HOH A 11 311 68 HOH HOH . 
D 4 HOH A 12 312 96 HOH HOH . 
D 4 HOH A 13 313 20 HOH HOH . 
D 4 HOH A 14 314 53 HOH HOH . 
D 4 HOH A 15 315 46 HOH HOH . 
D 4 HOH A 16 316 28 HOH HOH . 
D 4 HOH A 17 317 86 HOH HOH . 
D 4 HOH A 18 318 9 HOH HOH . 
D 4 HOH A 19 319 71 HOH HOH . 
D 4 HOH A 20 320 22 HOH HOH . 
D 4 HOH A 21 321 12 HOH HOH . 
D 4 HOH A 22 322 33 HOH HOH . 
D 4 HOH A 23 323 26 HOH HOH . 
D 4 HOH A 24 324 85 HOH HOH . 
D 4 HOH A 25 325 6 HOH HOH . 
D 4 HOH A 26 326 75 HOH HOH . 
D 4 HOH A 27 327 70 HOH HOH . 
D 4 HOH A 28 328 5 HOH HOH . 
D 4 HOH A 29 329 4 HOH HOH . 
D 4 HOH A 30 330 54 HOH HOH . 
D 4 HOH A 31 331 35 HOH HOH . 
D 4 HOH A 32 332 34 HOH HOH . 
D 4 HOH A 33 333 80 HOH HOH . 
D 4 HOH A 34 334 44 HOH HOH . 
D 4 HOH A 35 335 36 HOH HOH . 
D 4 HOH A 36 336 41 HOH HOH . 
D 4 HOH A 37 337 15 HOH HOH . 
D 4 HOH A 38 338 40 HOH HOH . 
D 4 HOH A 39 339 7 HOH HOH . 
D 4 HOH A 40 340 98 HOH HOH . 
D 4 HOH A 41 341 27 HOH HOH . 
D 4 HOH A 42 342 18 HOH HOH . 
D 4 HOH A 43 343 90 HOH HOH . 
D 4 HOH A 44 344 81 HOH HOH . 
D 4 HOH A 45 345 62 HOH HOH . 
D 4 HOH A 46 346 13 HOH HOH . 
D 4 HOH A 47 347 83 HOH HOH . 
D 4 HOH A 48 348 50 HOH HOH . 
D 4 HOH A 49 349 3 HOH HOH . 
D 4 HOH A 50 350 21 HOH HOH . 
D 4 HOH A 51 351 24 HOH HOH . 
D 4 HOH A 52 352 78 HOH HOH . 
D 4 HOH A 53 353 25 HOH HOH . 
D 4 HOH A 54 354 39 HOH HOH . 
D 4 HOH A 55 355 69 HOH HOH . 
D 4 HOH A 56 356 57 HOH HOH . 
D 4 HOH A 57 357 11 HOH HOH . 
D 4 HOH A 58 358 74 HOH HOH . 
D 4 HOH A 59 359 31 HOH HOH . 
D 4 HOH A 60 360 1 HOH HOH . 
D 4 HOH A 61 361 55 HOH HOH . 
D 4 HOH A 62 362 87 HOH HOH . 
D 4 HOH A 63 363 49 HOH HOH . 
D 4 HOH A 64 364 32 HOH HOH . 
D 4 HOH A 65 365 91 HOH HOH . 
D 4 HOH A 66 366 2 HOH HOH . 
D 4 HOH A 67 367 8 HOH HOH . 
D 4 HOH A 68 368 72 HOH HOH . 
D 4 HOH A 69 369 23 HOH HOH . 
D 4 HOH A 70 370 30 HOH HOH . 
D 4 HOH A 71 371 84 HOH HOH . 
D 4 HOH A 72 372 45 HOH HOH . 
D 4 HOH A 73 373 43 HOH HOH . 
D 4 HOH A 74 374 66 HOH HOH . 
D 4 HOH A 75 375 89 HOH HOH . 
D 4 HOH A 76 376 79 HOH HOH . 
D 4 HOH A 77 377 19 HOH HOH . 
D 4 HOH A 78 378 82 HOH HOH . 
D 4 HOH A 79 379 60 HOH HOH . 
D 4 HOH A 80 380 77 HOH HOH . 
D 4 HOH A 81 381 51 HOH HOH . 
D 4 HOH A 82 382 97 HOH HOH . 
D 4 HOH A 83 383 73 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 A1ILV . . . C 3 19.299 -3.797 16.511 1 28.6 ? C1 A1ILV 202 A 1 
HETATM 2 C C2 A1ILV . . . C 3 17.793 -3.641 16.695 1 28.45 ? C2 A1ILV 202 A 1 
HETATM 3 C C3 A1ILV . . . C 3 17.062 -4.953 16.448 1 28.75 ? C3 A1ILV 202 A 1 
HETATM 4 C C7 A1ILV . . . C 3 15.358 -3.447 13.706 1 27.41 ? C7 A1ILV 202 A 1 
HETATM 5 C C8 A1ILV . . . C 3 14.532 -4.124 12.826 1 28.42 ? C8 A1ILV 202 A 1 
HETATM 6 C C9 A1ILV . . . C 3 15.044 -4.548 11.621 1 29.64 ? C9 A1ILV 202 A 1 
HETATM 7 C C10 A1ILV . . . C 3 16.357 -4.309 11.276 1 28.31 ? C10 A1ILV 202 A 1 
HETATM 8 C C11 A1ILV . . . C 3 17.173 -3.631 12.166 1 27.26 ? C11 A1ILV 202 A 1 
HETATM 9 C C14 A1ILV . . . C 3 16.596 -0.218 13.769 1 21.84 ? C14 A1ILV 202 A 1 
HETATM 10 C C15 A1ILV . . . C 3 15.899 -0.246 12.563 1 20.31 ? C15 A1ILV 202 A 1 
HETATM 11 C C16 A1ILV . . . C 3 14.777 0.543 12.388 1 19.17 ? C16 A1ILV 202 A 1 
HETATM 12 C C19 A1ILV . . . C 3 16.154 0.609 14.795 1 20.54 ? C19 A1ILV 202 A 1 
HETATM 13 C C21 A1ILV . . . C 3 12.741 3.087 14.103 1 18.64 ? C21 A1ILV 202 A 1 
HETATM 14 C C22 A1ILV . . . C 3 11.494 3.676 13.478 1 18.38 ? C22 A1ILV 202 A 1 
HETATM 15 C C24 A1ILV . . . C 3 13.212 5.36 13.313 1 19.76 ? C24 A1ILV 202 A 1 
HETATM 16 N N26 A1ILV . . . C 3 12.761 6.565 14.082 1 21.08 ? N26 A1ILV 202 A 1 
HETATM 17 C C27 A1ILV . . . C 3 19.019 -0.571 13.697 1 25.1 ? C27 A1ILV 202 A 1 
HETATM 18 O O28 A1ILV . . . C 3 19.997 -1.31 13.757 1 25.25 ? O28 A1ILV 202 A 1 
HETATM 19 C C30 A1ILV . . . C 3 20.101 1.179 12.151 1 24.67 ? C30 A1ILV 202 A 1 
HETATM 20 C C4 A1ILV . . . C 3 17.22 -2.512 15.851 1 27.15 ? C4 A1ILV 202 A 1 
HETATM 21 C C5 A1ILV . . . C 3 17.585 -2.443 14.355 1 26.27 ? C5 A1ILV 202 A 1 
HETATM 22 C C6 A1ILV . . . C 3 16.687 -3.192 13.392 1 26.71 ? C6 A1ILV 202 A 1 
HETATM 23 CL CL12 A1ILV . . . C 3 14.012 -5.402 10.509 1 32.69 ? CL12 A1ILV 202 A 1 
HETATM 24 N N13 A1ILV . . . C 3 17.756 -1.035 13.95 1 24.36 ? N13 A1ILV 202 A 1 
HETATM 25 C C17 A1ILV . . . C 3 14.346 1.368 13.417 1 18.88 ? C17 A1ILV 202 A 1 
HETATM 26 C C18 A1ILV . . . C 3 15.033 1.4 14.622 1 19.18 ? C18 A1ILV 202 A 1 
HETATM 27 O O20 A1ILV . . . C 3 13.22 2.108 13.128 1 18.65 ? O20 A1ILV 202 A 1 
HETATM 28 C C23 A1ILV . . . C 3 12.078 4.732 12.529 1 18.33 ? C23 A1ILV 202 A 1 
HETATM 29 C C25 A1ILV . . . C 3 13.723 4.253 14.253 1 18.66 ? C25 A1ILV 202 A 1 
HETATM 30 C C29 A1ILV . . . C 3 19.172 0.899 13.337 1 24.8 ? C29 A1ILV 202 A 1 
HETATM 31 O O31 A1ILV . . . C 3 17.551 -3.232 18.052 1 29.03 ? O31 A1ILV 202 A 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           85 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           951 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#