data_9GIU # _model_server_result.job_id dFWH5bGhckqY3KY0P0WcTA _model_server_result.datetime_utc '2025-08-31 13:58:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9giu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 9GIU # _exptl.entry_id 9GIU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GIU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 508 n n CBA CAB Y01 sing 509 n n CBA CAN Y01 sing 510 n n CAN CAJ Y01 sing 511 n n CAJ CAO Y01 sing 512 n n CAO CBB Y01 sing 513 n n CBB CAC Y01 sing 514 n n CBB CBE Y01 sing 515 n n CBE CAP Y01 sing 516 n n CBE CBI Y01 sing 517 n n CAP CAQ Y01 sing 518 n n CAQ CBG Y01 sing 519 n n CBG CBI Y01 sing 520 n n CBG CBD Y01 sing 521 n n CBI CAE Y01 sing 522 n n CBI CAU Y01 sing 523 n n CAU CAS Y01 sing 524 n n CAS CBF Y01 sing 525 n n CBF CBD Y01 sing 526 n n CBF CBH Y01 sing 527 n n CBD CAK Y01 sing 528 n n CAK CAI Y01 sing 529 n n CAI CAZ Y01 doub 530 n n CAZ CAV Y01 sing 531 n n CAZ CBH Y01 sing 532 n n CAV CBC Y01 sing 533 n n CBH CAD Y01 sing 534 n n CBH CAT Y01 sing 535 n n CAT CAR Y01 sing 536 n n CAR CBC Y01 sing 537 n n CBC OAW Y01 sing 538 n n OAW CAY Y01 sing 539 n n CAY OAG Y01 doub 540 n n CAY CAM Y01 sing 541 n n CAM CAL Y01 sing 542 n n CAL CAX Y01 sing 543 n n CAX OAH Y01 sing 544 n n CAX OAF Y01 doub 545 n n CAA HAA1 Y01 sing 546 n n CAA HAA2 Y01 sing 547 n n CAA HAA3 Y01 sing 548 n n CBA HBA Y01 sing 549 n n CAB HAB1 Y01 sing 550 n n CAB HAB2 Y01 sing 551 n n CAB HAB3 Y01 sing 552 n n CAN HAN1 Y01 sing 553 n n CAN HAN2 Y01 sing 554 n n CAJ HAJ1 Y01 sing 555 n n CAJ HAJ2 Y01 sing 556 n n CAO HAO1 Y01 sing 557 n n CAO HAO2 Y01 sing 558 n n CBB HBB Y01 sing 559 n n CAC HAC1 Y01 sing 560 n n CAC HAC2 Y01 sing 561 n n CAC HAC3 Y01 sing 562 n n CBE HBE Y01 sing 563 n n CAP HAP1 Y01 sing 564 n n CAP HAP2 Y01 sing 565 n n CAQ HAQ1 Y01 sing 566 n n CAQ HAQ2 Y01 sing 567 n n CBG HBG Y01 sing 568 n n CBD HBD Y01 sing 569 n n CAE HAE1 Y01 sing 570 n n CAE HAE2 Y01 sing 571 n n CAE HAE3 Y01 sing 572 n n CAU HAU1 Y01 sing 573 n n CAU HAU2 Y01 sing 574 n n CAS HAS1 Y01 sing 575 n n CAS HAS2 Y01 sing 576 n n CBF HBF Y01 sing 577 n n CAK HAK1 Y01 sing 578 n n CAK HAK2 Y01 sing 579 n n CAI HAI Y01 sing 580 n n CAV HAV1 Y01 sing 581 n n CAV HAV2 Y01 sing 582 n n CBC HBC Y01 sing 583 n n CAD HAD1 Y01 sing 584 n n CAD HAD2 Y01 sing 585 n n CAD HAD3 Y01 sing 586 n n CAT HAT1 Y01 sing 587 n n CAT HAT2 Y01 sing 588 n n CAR HAR1 Y01 sing 589 n n CAR HAR2 Y01 sing 590 n n CAM HAM1 Y01 sing 591 n n CAM HAM2 Y01 sing 592 n n CAL HAL1 Y01 sing 593 n n CAL HAL2 Y01 sing 594 n n OAH HAH Y01 sing 595 n n # _atom_sites.entry_id 9GIU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Y01 A 1 801 802 Y01 Y01 . C 2 Y01 A 1 802 805 Y01 Y01 . D 2 Y01 A 1 803 806 Y01 Y01 . E 3 3PE A 1 804 807 3PE 3PE . F 2 Y01 A 1 805 808 Y01 Y01 . G 2 Y01 A 1 806 809 Y01 Y01 . H 2 Y01 A 1 807 810 Y01 Y01 . I 2 Y01 A 1 808 811 Y01 Y01 . J 4 HOH A 1 901 17 HOH HOH . J 4 HOH A 2 902 21 HOH HOH . J 4 HOH A 3 903 6 HOH HOH . J 4 HOH A 4 904 18 HOH HOH . J 4 HOH A 5 905 7 HOH HOH . J 4 HOH A 6 906 13 HOH HOH . J 4 HOH A 7 907 5 HOH HOH . J 4 HOH A 8 908 1 HOH HOH . J 4 HOH A 9 909 16 HOH HOH . J 4 HOH A 10 910 11 HOH HOH . J 4 HOH A 11 911 8 HOH HOH . J 4 HOH A 12 912 10 HOH HOH . J 4 HOH A 13 913 20 HOH HOH . J 4 HOH A 14 914 15 HOH HOH . J 4 HOH A 15 915 9 HOH HOH . J 4 HOH A 16 916 19 HOH HOH . J 4 HOH A 17 917 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . B 2 146.174 124.849 138.348 1 57.88 ? CAA Y01 801 A 1 HETATM 2 C CBA Y01 . . . B 2 145.854 125.8 137.199 1 60.89 ? CBA Y01 801 A 1 HETATM 3 C CAB Y01 . . . B 2 145.171 127.059 137.725 1 55.48 ? CAB Y01 801 A 1 HETATM 4 C CAN Y01 . . . B 2 144.986 125.138 136.127 1 57 ? CAN Y01 801 A 1 HETATM 5 C CAJ Y01 . . . B 2 144.558 126.055 134.989 1 55.66 ? CAJ Y01 801 A 1 HETATM 6 C CAO Y01 . . . B 2 143.434 125.448 134.153 1 59.47 ? CAO Y01 801 A 1 HETATM 7 C CBB Y01 . . . B 2 142.621 126.455 133.326 1 58.99 ? CBB Y01 801 A 1 HETATM 8 C CAC Y01 . . . B 2 143.529 127.584 132.84 1 54.6 ? CAC Y01 801 A 1 HETATM 9 C CBE Y01 . . . B 2 141.864 125.727 132.201 1 57.08 ? CBE Y01 801 A 1 HETATM 10 C CAP Y01 . . . B 2 141.219 124.405 132.702 1 56.37 ? CAP Y01 801 A 1 HETATM 11 C CAQ Y01 . . . B 2 139.892 124.215 131.943 1 54.46 ? CAQ Y01 801 A 1 HETATM 12 C CBG Y01 . . . B 2 139.975 125.249 130.83 1 55.54 ? CBG Y01 801 A 1 HETATM 13 C CBI Y01 . . . B 2 140.695 126.446 131.477 1 56.43 ? CBI Y01 801 A 1 HETATM 14 C CAE Y01 . . . B 2 139.819 127.166 132.506 1 58.35 ? CAE Y01 801 A 1 HETATM 15 C CAU Y01 . . . B 2 141.077 127.379 130.326 1 57.16 ? CAU Y01 801 A 1 HETATM 16 C CAS Y01 . . . B 2 139.853 127.803 129.516 1 56.23 ? CAS Y01 801 A 1 HETATM 17 C CBF Y01 . . . B 2 139.049 126.622 128.966 1 55.62 ? CBF Y01 801 A 1 HETATM 18 C CBD Y01 . . . B 2 138.71 125.598 130.058 1 59.9 ? CBD Y01 801 A 1 HETATM 19 C CAK Y01 . . . B 2 138.086 124.356 129.421 1 58.61 ? CAK Y01 801 A 1 HETATM 20 C CAI Y01 . . . B 2 137.137 124.665 128.307 1 55.99 ? CAI Y01 801 A 1 HETATM 21 C CAZ Y01 . . . B 2 137.044 125.842 127.686 1 59.66 ? CAZ Y01 801 A 1 HETATM 22 C CAV Y01 . . . B 2 136.125 126.002 126.497 1 55.15 ? CAV Y01 801 A 1 HETATM 23 C CBH Y01 . . . B 2 137.8 127.068 128.173 1 55.88 ? CBH Y01 801 A 1 HETATM 24 C CAD Y01 . . . B 2 136.866 127.914 129.05 1 50.62 ? CAD Y01 801 A 1 HETATM 25 C CAT Y01 . . . B 2 138.293 127.899 126.969 1 54.22 ? CAT Y01 801 A 1 HETATM 26 C CAR Y01 . . . B 2 137.271 128.097 125.862 1 51.06 ? CAR Y01 801 A 1 HETATM 27 C CBC Y01 . . . B 2 136.822 126.744 125.362 1 53.87 ? CBC Y01 801 A 1 HETATM 28 O OAW Y01 . . . B 2 135.981 126.997 124.219 1 58.53 ? OAW Y01 801 A 1 HETATM 29 C CAY Y01 . . . B 2 134.799 126.406 124.051 1 57.95 ? CAY Y01 801 A 1 HETATM 30 O OAG Y01 . . . B 2 133.767 126.866 124.473 1 52.96 ? OAG Y01 801 A 1 HETATM 31 C CAM Y01 . . . B 2 134.931 125.139 123.25 1 57.36 ? CAM Y01 801 A 1 HETATM 32 C CAL Y01 . . . B 2 133.661 124.314 123.166 1 59.1 ? CAL Y01 801 A 1 HETATM 33 C CAX Y01 . . . B 2 132.468 125.008 122.484 1 57.06 ? CAX Y01 801 A 1 HETATM 34 O OAH Y01 . . . B 2 132.743 125.698 121.483 1 61.76 ? OAH Y01 801 A 1 HETATM 35 O OAF Y01 . . . B 2 131.336 124.828 122.972 1 57.76 ? OAF Y01 801 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 411 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #