data_9GJ0
#
_model_server_result.job_id            nYA2RtdXF_nJ1JYc0NPqFQ 
_model_server_result.datetime_utc      '2024-12-18 09:14:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9gj0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":600}' 
#
_entry.id    9GJ0 
#
_exptl.entry_id    9GJ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9GJ0 
_cell.length_a            109.77 
_cell.length_b            109.77 
_cell.length_c            244.985 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9GJ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D 1 1,2 
B,C,E 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 390 A HIS 390 1_555 D C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.481 ? 
covale ? covale2 B NE2 HIS 390 B HIS 390 1_555 E C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.487 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     9GJ0 
_atom_sites.fract_transf_matrix[1][1]    0.00911 
_atom_sites.fract_transf_matrix[1][2]    0.00526 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010519 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004082 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FAD A 1 600 600 FAD FAD . 
E 2 FAD B 1 600 600 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 -5.738 -35.709 53.053 1 100.12 ? PA FAD 600 B 1 
HETATM 2 O O1A FAD . . . E 2 -5.795 -34.427 53.806 1 120.25 ? O1A FAD 600 B 1 
HETATM 3 O O2A FAD . . . E 2 -4.406 -36.05 52.495 1 87.63 ? O2A FAD 600 B 1 
HETATM 4 O O5B FAD . . . E 2 -6.221 -36.863 54.05 1 111.31 ? O5B FAD 600 B 1 
HETATM 5 C C5B FAD . . . E 2 -7.537 -36.719 54.667 1 115.46 ? C5B FAD 600 B 1 
HETATM 6 C C4B FAD . . . E 2 -7.403 -36.666 56.172 1 120.81 ? C4B FAD 600 B 1 
HETATM 7 O O4B FAD . . . E 2 -7.012 -37.967 56.675 1 122.36 ? O4B FAD 600 B 1 
HETATM 8 C C3B FAD . . . E 2 -6.342 -35.695 56.705 1 128.72 ? C3B FAD 600 B 1 
HETATM 9 O O3B FAD . . . E 2 -6.808 -34.352 56.785 1 116.1 ? O3B FAD 600 B 1 
HETATM 10 C C2B FAD . . . E 2 -6.019 -36.313 58.07 1 126.33 ? C2B FAD 600 B 1 
HETATM 11 O O2B FAD . . . E 2 -6.951 -35.97 59.072 1 127.39 ? O2B FAD 600 B 1 
HETATM 12 C C1B FAD . . . E 2 -6.063 -37.807 57.726 1 130.91 ? C1B FAD 600 B 1 
HETATM 13 N N9A FAD . . . E 2 -4.752 -38.282 57.275 1 130.6 ? N9A FAD 600 B 1 
HETATM 14 C C8A FAD . . . E 2 -4.257 -38.254 55.996 1 129.66 ? C8A FAD 600 B 1 
HETATM 15 N N7A FAD . . . E 2 -3.036 -38.721 55.885 1 116.61 ? N7A FAD 600 B 1 
HETATM 16 C C5A FAD . . . E 2 -2.7 -39.069 57.183 1 113.7 ? C5A FAD 600 B 1 
HETATM 17 C C6A FAD . . . E 2 -1.53 -39.628 57.726 1 114.38 ? C6A FAD 600 B 1 
HETATM 18 N N6A FAD . . . E 2 -0.454 -39.937 56.997 1 117.96 ? N6A FAD 600 B 1 
HETATM 19 N N1A FAD . . . E 2 -1.518 -39.858 59.064 1 103.44 ? N1A FAD 600 B 1 
HETATM 20 C C2A FAD . . . E 2 -2.595 -39.539 59.783 1 95.06 ? C2A FAD 600 B 1 
HETATM 21 N N3A FAD . . . E 2 -3.746 -39.017 59.377 1 113.19 ? N3A FAD 600 B 1 
HETATM 22 C C4A FAD . . . E 2 -3.741 -38.8 58.051 1 119.55 ? C4A FAD 600 B 1 
HETATM 23 N N1 FAD . . . E 2 -15.044 -38.371 49.494 1 107.9 ? N1 FAD 600 B 1 
HETATM 24 C C2 FAD . . . E 2 -15.399 -39.694 49.47 1 112.05 ? C2 FAD 600 B 1 
HETATM 25 O O2 FAD . . . E 2 -14.944 -40.523 50.27 1 108.25 ? O2 FAD 600 B 1 
HETATM 26 N N3 FAD . . . E 2 -16.299 -40.127 48.503 1 122.57 ? N3 FAD 600 B 1 
HETATM 27 C C4 FAD . . . E 2 -16.894 -39.356 47.527 1 131.5 ? C4 FAD 600 B 1 
HETATM 28 O O4 FAD . . . E 2 -17.674 -39.831 46.717 1 130.44 ? O4 FAD 600 B 1 
HETATM 29 C C4X FAD . . . E 2 -16.527 -37.996 47.581 1 131.75 ? C4X FAD 600 B 1 
HETATM 30 N N5 FAD . . . E 2 -17.071 -37.203 46.693 1 145.69 ? N5 FAD 600 B 1 
HETATM 31 C C5X FAD . . . E 2 -16.75 -35.873 46.738 1 152.05 ? C5X FAD 600 B 1 
HETATM 32 C C6 FAD . . . E 2 -17.348 -35.008 45.796 1 141.78 ? C6 FAD 600 B 1 
HETATM 33 C C7 FAD . . . E 2 -17.084 -33.656 45.788 1 140.08 ? C7 FAD 600 B 1 
HETATM 34 C C7M FAD . . . E 2 -17.756 -32.78 44.762 1 133.47 ? C7M FAD 600 B 1 
HETATM 35 C C8 FAD . . . E 2 -16.158 -33.123 46.746 1 161.92 ? C8 FAD 600 B 1 
HETATM 36 C C8M FAD . . . E 2 -15.832 -31.648 46.815 1 170.85 ? C8M FAD 600 B 1 
HETATM 37 C C9 FAD . . . E 2 -15.567 -33.974 47.659 1 156.9 ? C9 FAD 600 B 1 
HETATM 38 C C9A FAD . . . E 2 -15.843 -35.35 47.685 1 144.89 ? C9A FAD 600 B 1 
HETATM 39 N N10 FAD . . . E 2 -15.258 -36.225 48.603 1 122.02 ? N10 FAD 600 B 1 
HETATM 40 C C10 FAD . . . E 2 -15.592 -37.572 48.599 1 118.71 ? C10 FAD 600 B 1 
HETATM 41 C C1' FAD . . . E 2 -14.308 -35.728 49.621 1 120.49 ? C1' FAD 600 B 1 
HETATM 42 C C2' FAD . . . E 2 -12.836 -35.672 49.206 1 124.31 ? C2' FAD 600 B 1 
HETATM 43 O O2' FAD . . . E 2 -12.634 -34.858 48.043 1 116.12 ? O2' FAD 600 B 1 
HETATM 44 C C3' FAD . . . E 2 -12.19 -37.054 49.021 1 129.97 ? C3' FAD 600 B 1 
HETATM 45 O O3' FAD . . . E 2 -12.53 -37.894 50.124 1 113.68 ? O3' FAD 600 B 1 
HETATM 46 C C4' FAD . . . E 2 -10.662 -37.041 48.887 1 130.06 ? C4' FAD 600 B 1 
HETATM 47 O O4' FAD . . . E 2 -10.26 -38.241 48.221 1 138.02 ? O4' FAD 600 B 1 
HETATM 48 C C5' FAD . . . E 2 -9.922 -36.946 50.215 1 119.95 ? C5' FAD 600 B 1 
HETATM 49 O O5' FAD . . . E 2 -8.639 -36.279 50.042 1 118.29 ? O5' FAD 600 B 1 
HETATM 50 P P FAD . . . E 2 -7.299 -36.857 50.701 1 125.94 ? P FAD 600 B 1 
HETATM 51 O O1P FAD . . . E 2 -6.232 -36.81 49.671 1 112.92 ? O1P FAD 600 B 1 
HETATM 52 O O2P FAD . . . E 2 -7.651 -38.187 51.264 1 138.04 ? O2P FAD 600 B 1 
HETATM 53 O O3P FAD . . . E 2 -6.864 -35.814 51.88 1 107.92 ? O3P FAD 600 B 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           53 
#