data_9GNQ # _model_server_result.job_id JISfxfH1aKzL1eOxVQAkkQ _model_server_result.datetime_utc '2024-11-21 09:48:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gnq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":502}' # _entry.id 9GNQ # _exptl.entry_id 9GNQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 853.906 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TAXOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GNQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GNQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O3G GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 F O1B GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? # _chem_comp.formula 'C47 H51 N O14' _chem_comp.formula_weight 853.906 _chem_comp.id TA1 _chem_comp.mon_nstd_flag . _chem_comp.name TAXOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C01 TA1 sing 427 n n O01 H011 TA1 sing 428 n n C01 C02 TA1 sing 429 n n C01 C43 TA1 sing 430 n n C01 C45 TA1 sing 431 n n C02 O02 TA1 sing 432 n n C02 C10 TA1 sing 433 n n C02 H021 TA1 sing 434 n n O02 C03 TA1 sing 435 n n C03 O03 TA1 doub 436 n n C03 C04 TA1 sing 437 n n C04 C05 TA1 doub 438 n y C04 C09 TA1 sing 439 n y C05 C06 TA1 sing 440 n y C05 H051 TA1 sing 441 n n C06 C07 TA1 doub 442 n y C06 H061 TA1 sing 443 n n C07 C08 TA1 sing 444 n y C07 HC71 TA1 sing 445 n n C08 C09 TA1 doub 446 n y C08 H081 TA1 sing 447 n n C09 H091 TA1 sing 448 n n C10 C11 TA1 sing 449 n n C10 C18 TA1 sing 450 n n C10 H101 TA1 sing 451 n n C11 O04 TA1 sing 452 n n C11 C14 TA1 sing 453 n n C11 C15 TA1 sing 454 n n O04 C12 TA1 sing 455 n n C12 O05 TA1 doub 456 n n C12 C13 TA1 sing 457 n n C13 H131 TA1 sing 458 n n C13 H132 TA1 sing 459 n n C13 H133 TA1 sing 460 n n C14 O06 TA1 sing 461 n n C14 H141 TA1 sing 462 n n C14 H142 TA1 sing 463 n n O06 C15 TA1 sing 464 n n C15 C16 TA1 sing 465 n n C15 H151 TA1 sing 466 n n C16 C17 TA1 sing 467 n n C16 H161 TA1 sing 468 n n C16 H162 TA1 sing 469 n n C17 O07 TA1 sing 470 n n C17 C18 TA1 sing 471 n n C17 H171 TA1 sing 472 n n O07 H071 TA1 sing 473 n n C18 C19 TA1 sing 474 n n C18 C20 TA1 sing 475 n n C19 H191 TA1 sing 476 n n C19 H192 TA1 sing 477 n n C19 H193 TA1 sing 478 n n C20 O08 TA1 doub 479 n n C20 C21 TA1 sing 480 n n C21 O09 TA1 sing 481 n n C21 C24 TA1 sing 482 n n C21 H211 TA1 sing 483 n n O09 C22 TA1 sing 484 n n C22 O10 TA1 doub 485 n n C22 C23 TA1 sing 486 n n C23 H231 TA1 sing 487 n n C23 H232 TA1 sing 488 n n C23 H233 TA1 sing 489 n n C24 C25 TA1 doub 490 n n C24 C45 TA1 sing 491 n n C25 C26 TA1 sing 492 n n C25 C44 TA1 sing 493 n n C26 O11 TA1 sing 494 n n C26 C43 TA1 sing 495 n n C26 H261 TA1 sing 496 n n O11 C27 TA1 sing 497 n n C27 O12 TA1 doub 498 n n C27 C28 TA1 sing 499 n n C28 O13 TA1 sing 500 n n C28 C29 TA1 sing 501 n n C28 H281 TA1 sing 502 n n O13 HO11 TA1 sing 503 n n C29 N01 TA1 sing 504 n n C29 C37 TA1 sing 505 n n C29 H291 TA1 sing 506 n n N01 C30 TA1 sing 507 n n N01 HN01 TA1 sing 508 n n C30 O14 TA1 doub 509 n n C30 C31 TA1 sing 510 n n C31 C32 TA1 doub 511 n y C31 C36 TA1 sing 512 n y C32 C33 TA1 sing 513 n y C32 H321 TA1 sing 514 n n C33 C34 TA1 doub 515 n y C33 H331 TA1 sing 516 n n C34 C35 TA1 sing 517 n y C34 H341 TA1 sing 518 n n C35 C36 TA1 doub 519 n y C35 H351 TA1 sing 520 n n C36 H361 TA1 sing 521 n n C37 C38 TA1 doub 522 n y C37 C42 TA1 sing 523 n y C38 C39 TA1 sing 524 n y C38 H381 TA1 sing 525 n n C39 C40 TA1 doub 526 n y C39 H391 TA1 sing 527 n n C40 C41 TA1 sing 528 n y C40 H401 TA1 sing 529 n n C41 C42 TA1 doub 530 n y C41 H411 TA1 sing 531 n n C42 H421 TA1 sing 532 n n C43 H431 TA1 sing 533 n n C43 H432 TA1 sing 534 n n C44 H441 TA1 sing 535 n n C44 H442 TA1 sing 536 n n C44 H443 TA1 sing 537 n n C45 C46 TA1 sing 538 n n C45 C47 TA1 sing 539 n n C46 H461 TA1 sing 540 n n C46 H462 TA1 sing 541 n n C46 H463 TA1 sing 542 n n C47 H471 TA1 sing 543 n n C47 H472 TA1 sing 544 n n C47 H473 TA1 sing 545 n n # _atom_sites.entry_id 9GNQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GDP B 1 501 501 GDP GDP . E 5 TA1 B 1 502 502 TA1 TA1 . F 6 GTP A 1 501 501 GTP GTP . G 7 MG A 1 502 502 MG MG . H 8 ADP K 1 501 401 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 TA1 . . . E 5 137.107 179.906 144.388 1 74.55 ? O01 TA1 502 B 1 HETATM 2 C C01 TA1 . . . E 5 137.453 179.711 143.034 1 76.21 ? C01 TA1 502 B 1 HETATM 3 C C02 TA1 . . . E 5 138.81 178.881 143.087 1 74.77 ? C02 TA1 502 B 1 HETATM 4 O O02 TA1 . . . E 5 138.425 177.736 143.851 1 81.22 ? O02 TA1 502 B 1 HETATM 5 C C03 TA1 . . . E 5 138.869 177.529 145.089 1 77.66 ? C03 TA1 502 B 1 HETATM 6 O O03 TA1 . . . E 5 139.639 178.252 145.664 1 76.74 ? O03 TA1 502 B 1 HETATM 7 C C04 TA1 . . . E 5 138.305 176.295 145.68 1 73.86 ? C04 TA1 502 B 1 HETATM 8 C C05 TA1 . . . E 5 137.778 176.368 146.966 1 74.85 ? C05 TA1 502 B 1 HETATM 9 C C06 TA1 . . . E 5 137.243 175.241 147.557 1 74.17 ? C06 TA1 502 B 1 HETATM 10 C C07 TA1 . . . E 5 137.253 174.039 146.866 1 76.16 ? C07 TA1 502 B 1 HETATM 11 C C08 TA1 . . . E 5 137.763 173.956 145.583 1 72.44 ? C08 TA1 502 B 1 HETATM 12 C C09 TA1 . . . E 5 138.298 175.084 144.991 1 69.62 ? C09 TA1 502 B 1 HETATM 13 C C10 TA1 . . . E 5 139.5 178.378 141.755 1 69.68 ? C10 TA1 502 B 1 HETATM 14 C C11 TA1 . . . E 5 139.9 176.869 141.77 1 75.82 ? C11 TA1 502 B 1 HETATM 15 O O04 TA1 . . . E 5 138.7 176.099 141.836 1 76.3 ? O04 TA1 502 B 1 HETATM 16 C C12 TA1 . . . E 5 137.78 175.925 140.889 1 74.37 ? C12 TA1 502 B 1 HETATM 17 O O05 TA1 . . . E 5 137.78 176.475 139.824 1 72.54 ? O05 TA1 502 B 1 HETATM 18 C C13 TA1 . . . E 5 136.744 174.948 141.352 1 71.02 ? C13 TA1 502 B 1 HETATM 19 C C14 TA1 . . . E 5 140.97 176.409 142.767 1 76.73 ? C14 TA1 502 B 1 HETATM 20 O O06 TA1 . . . E 5 141.792 175.901 141.708 1 81.77 ? O06 TA1 502 B 1 HETATM 21 C C15 TA1 . . . E 5 140.886 176.377 140.683 1 77.48 ? C15 TA1 502 B 1 HETATM 22 C C16 TA1 . . . E 5 141.557 177.345 139.732 1 72.93 ? C16 TA1 502 B 1 HETATM 23 C C17 TA1 . . . E 5 140.944 178.729 139.678 1 73.57 ? C17 TA1 502 B 1 HETATM 24 O O07 TA1 . . . E 5 141.669 179.607 138.851 1 75.96 ? O07 TA1 502 B 1 HETATM 25 C C18 TA1 . . . E 5 140.679 179.291 141.124 1 71 ? C18 TA1 502 B 1 HETATM 26 C C19 TA1 . . . E 5 142.02 179.282 141.868 1 71.22 ? C19 TA1 502 B 1 HETATM 27 C C20 TA1 . . . E 5 140.302 180.777 140.893 1 75.91 ? C20 TA1 502 B 1 HETATM 28 O O08 TA1 . . . E 5 141.093 181.597 141.293 1 78.27 ? O08 TA1 502 B 1 HETATM 29 C C21 TA1 . . . E 5 139.067 181.425 140.214 1 78.17 ? C21 TA1 502 B 1 HETATM 30 O O09 TA1 . . . E 5 139.117 182.837 140.215 1 80.09 ? O09 TA1 502 B 1 HETATM 31 C C22 TA1 . . . E 5 139.355 183.531 139.097 1 77.78 ? C22 TA1 502 B 1 HETATM 32 O O10 TA1 . . . E 5 139.47 183.023 138.012 1 75.62 ? O10 TA1 502 B 1 HETATM 33 C C23 TA1 . . . E 5 139.449 184.994 139.397 1 74.44 ? C23 TA1 502 B 1 HETATM 34 C C24 TA1 . . . E 5 137.81 180.961 140.923 1 73.95 ? C24 TA1 502 B 1 HETATM 35 C C25 TA1 . . . E 5 137.019 180.1 140.229 1 72.89 ? C25 TA1 502 B 1 HETATM 36 C C26 TA1 . . . E 5 135.888 179.39 140.945 1 73.49 ? C26 TA1 502 B 1 HETATM 37 O O11 TA1 . . . E 5 135.314 178.263 140.251 1 81.81 ? O11 TA1 502 B 1 HETATM 38 C C27 TA1 . . . E 5 134.182 178.46 139.58 1 75.95 ? C27 TA1 502 B 1 HETATM 39 O O12 TA1 . . . E 5 133.633 179.521 139.482 1 71.74 ? O12 TA1 502 B 1 HETATM 40 C C28 TA1 . . . E 5 133.668 177.181 138.919 1 73.3 ? C28 TA1 502 B 1 HETATM 41 O O13 TA1 . . . E 5 132.494 177.419 138.219 1 73.77 ? O13 TA1 502 B 1 HETATM 42 C C29 TA1 . . . E 5 133.347 176.163 140.021 1 72.59 ? C29 TA1 502 B 1 HETATM 43 N N01 TA1 . . . E 5 132.46 176.817 140.948 1 67.34 ? N01 TA1 502 B 1 HETATM 44 C C30 TA1 . . . E 5 132.344 176.409 142.222 1 74.51 ? C30 TA1 502 B 1 HETATM 45 O O14 TA1 . . . E 5 132.976 175.461 142.66 1 82.44 ? O14 TA1 502 B 1 HETATM 46 C C31 TA1 . . . E 5 131.409 177.183 143.078 1 69.96 ? C31 TA1 502 B 1 HETATM 47 C C32 TA1 . . . E 5 130.058 177.187 142.769 1 68.48 ? C32 TA1 502 B 1 HETATM 48 C C33 TA1 . . . E 5 129.173 177.901 143.551 1 68.95 ? C33 TA1 502 B 1 HETATM 49 C C34 TA1 . . . E 5 129.631 178.621 144.642 1 73.02 ? C34 TA1 502 B 1 HETATM 50 C C35 TA1 . . . E 5 130.978 178.625 144.954 1 74.01 ? C35 TA1 502 B 1 HETATM 51 C C36 TA1 . . . E 5 131.864 177.908 144.173 1 72.17 ? C36 TA1 502 B 1 HETATM 52 C C37 TA1 . . . E 5 132.852 174.85 139.465 1 72.52 ? C37 TA1 502 B 1 HETATM 53 C C38 TA1 . . . E 5 133.771 173.857 139.149 1 72.03 ? C38 TA1 502 B 1 HETATM 54 C C39 TA1 . . . E 5 133.355 172.638 138.641 1 72.53 ? C39 TA1 502 B 1 HETATM 55 C C40 TA1 . . . E 5 132.006 172.392 138.444 1 72.76 ? C40 TA1 502 B 1 HETATM 56 C C41 TA1 . . . E 5 131.086 173.378 138.756 1 75.39 ? C41 TA1 502 B 1 HETATM 57 C C42 TA1 . . . E 5 131.503 174.598 139.267 1 75.69 ? C42 TA1 502 B 1 HETATM 58 C C43 TA1 . . . E 5 136.345 178.898 142.324 1 73.6 ? C43 TA1 502 B 1 HETATM 59 C C44 TA1 . . . E 5 137.234 179.673 138.81 1 72.79 ? C44 TA1 502 B 1 HETATM 60 C C45 TA1 . . . E 5 137.595 181.149 142.44 1 73.7 ? C45 TA1 502 B 1 HETATM 61 C C46 TA1 . . . E 5 136.38 182.087 142.7 1 71.54 ? C46 TA1 502 B 1 HETATM 62 C C47 TA1 . . . E 5 138.596 181.955 143.289 1 73.74 ? C47 TA1 502 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 62 #