data_9GOH # _model_server_result.job_id 7VTPwhm4kNBBiOrAaXr1kw _model_server_result.datetime_utc '2025-07-21 18:33:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9goh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":809}' # _entry.id 9GOH # _exptl.entry_id 9GOH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GOH _cell.length_a 65.92 _cell.length_b 68.208 _cell.length_c 421.06 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GOH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 L N N ? 6 M N N ? 6 U N N ? 6 V N N ? 6 W N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 5 ? 3 4 3 MAN BMA C1 O1 . O3 HO3 . sing 6 ? 3 5 4 MAN MAN C1 O1 . O2 HO2 . sing 7 ? 3 6 3 MAN BMA C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG C 1 NAG 2 n C NAG 2 C 2 NAG C 2 NAG 2 n C BMA 3 C 3 BMA C 3 BMA 3 n D NAG 1 D 1 NAG D 1 NAG 3 n D NAG 2 D 2 NAG D 2 NAG 3 n D BMA 3 D 3 BMA D 3 BMA 3 n D MAN 4 D 4 MAN D 4 MAN 3 n D MAN 5 D 5 MAN D 5 MAN 3 n D MAN 6 D 6 MAN D 6 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 292 A CYS 328 1_555 A SG CYS 303 A CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 349 A CYS 385 1_555 A SG CYS 358 A CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 408 A CYS 444 1_555 A SG CYS 411 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 418 A CYS 454 1_555 A SG CYS 436 A CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 A SG CYS 613 A CYS 649 1_555 A SG CYS 726 A CYS 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 B SG CYS 292 B CYS 328 1_555 B SG CYS 303 B CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf7 B SG CYS 349 B CYS 385 1_555 B SG CYS 358 B CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf8 B SG CYS 408 B CYS 444 1_555 B SG CYS 411 B CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf9 B SG CYS 418 B CYS 454 1_555 B SG CYS 436 B CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf10 B SG CYS 613 B CYS 649 1_555 B SG CYS 726 B CYS 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? covale ? covale1 A ND2 ASN 49 A ASN 85 1_555 F C1 NAG . A NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale2 A ND2 ASN 56 A ASN 92 1_555 I C1 NAG . A NAG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale3 A ND2 ASN 114 A ASN 150 1_555 E C1 NAG . A NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale4 A ND2 ASN 183 A ASN 219 1_555 J C1 NAG . A NAG 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale5 A ND2 ASN 193 A ASN 229 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale6 A ND2 ASN 245 A ASN 281 1_555 G C1 NAG . A NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale7 A OG SER 594 A SER 630 1_555 K P1 A1INF . A A1INF 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.583 ? covale ? covale8 A ND2 ASN 649 A ASN 685 1_555 H C1 NAG . A NAG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale9 B ND2 ASN 49 B ASN 85 1_555 P C1 NAG . B NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale10 B ND2 ASN 56 B ASN 92 1_555 R C1 NAG . B NAG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale11 B ND2 ASN 114 B ASN 150 1_555 O C1 NAG . B NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale12 B ND2 ASN 193 B ASN 229 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale13 B ND2 ASN 245 B ASN 281 1_555 Q C1 NAG . B NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale14 B OG SER 594 B SER 630 1_555 T P1 A1INF . B A1INF 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.584 ? covale ? covale15 B ND2 ASN 649 B ASN 685 1_555 S C1 NAG . B NAG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale16 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale17 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale18 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale19 D O4 NAG . D NAG 2 1_555 D C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale20 D O3 BMA . D BMA 3 1_555 D C1 MAN . D MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale21 D O6 BMA . D BMA 3 1_555 D C1 MAN . D MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale22 D O2 MAN . D MAN 4 1_555 D C1 MAN . D MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 388 n n S O2 SO4 doub 389 n n S O3 SO4 sing 390 n n S O4 SO4 sing 391 n n # _atom_sites.entry_id 9GOH _atom_sites.fract_transf_matrix[1][1] 0.01517 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 NAG A 1 801 793 NAG NAG . F 4 NAG A 1 802 794 NAG NAG . G 4 NAG A 1 803 795 NAG NAG . H 4 NAG A 1 804 801 NAG NAG . I 4 NAG A 1 805 802 NAG NAG . J 4 NAG A 1 806 805 NAG NAG . K 5 A1INF A 1 807 1 A1INF INX . L 6 SO4 A 1 808 1 SO4 SO4 . M 6 SO4 A 1 809 2 SO4 SO4 . N 7 EDO A 1 810 8 EDO EDO . O 4 NAG B 1 801 793 NAG NAG . P 4 NAG B 1 802 794 NAG NAG . Q 4 NAG B 1 803 795 NAG NAG . R 4 NAG B 1 804 801 NAG NAG . S 4 NAG B 1 805 802 NAG NAG . T 5 A1INF B 1 806 2 A1INF INX . U 6 SO4 B 1 807 4 SO4 SO4 . V 6 SO4 B 1 808 5 SO4 SO4 . W 6 SO4 B 1 809 7 SO4 SO4 . X 8 HOH A 1 901 46 HOH HOH . X 8 HOH A 2 902 118 HOH HOH . X 8 HOH A 3 903 69 HOH HOH . X 8 HOH A 4 904 30 HOH HOH . X 8 HOH A 5 905 89 HOH HOH . X 8 HOH A 6 906 53 HOH HOH . X 8 HOH A 7 907 105 HOH HOH . X 8 HOH A 8 908 108 HOH HOH . X 8 HOH A 9 909 81 HOH HOH . X 8 HOH A 10 910 63 HOH HOH . X 8 HOH A 11 911 132 HOH HOH . X 8 HOH A 12 912 51 HOH HOH . X 8 HOH A 13 913 104 HOH HOH . X 8 HOH A 14 914 39 HOH HOH . X 8 HOH A 15 915 97 HOH HOH . X 8 HOH A 16 916 58 HOH HOH . X 8 HOH A 17 917 49 HOH HOH . X 8 HOH A 18 918 21 HOH HOH . X 8 HOH A 19 919 72 HOH HOH . X 8 HOH A 20 920 48 HOH HOH . X 8 HOH A 21 921 59 HOH HOH . X 8 HOH A 22 922 17 HOH HOH . X 8 HOH A 23 923 98 HOH HOH . X 8 HOH A 24 924 62 HOH HOH . X 8 HOH A 25 925 115 HOH HOH . X 8 HOH A 26 926 44 HOH HOH . X 8 HOH A 27 927 70 HOH HOH . X 8 HOH A 28 928 47 HOH HOH . X 8 HOH A 29 929 65 HOH HOH . X 8 HOH A 30 930 73 HOH HOH . X 8 HOH A 31 931 112 HOH HOH . X 8 HOH A 32 932 124 HOH HOH . X 8 HOH A 33 933 31 HOH HOH . X 8 HOH A 34 934 10 HOH HOH . X 8 HOH A 35 935 75 HOH HOH . X 8 HOH A 36 936 60 HOH HOH . X 8 HOH A 37 937 32 HOH HOH . X 8 HOH A 38 938 67 HOH HOH . X 8 HOH A 39 939 45 HOH HOH . X 8 HOH A 40 940 116 HOH HOH . X 8 HOH A 41 941 103 HOH HOH . X 8 HOH A 42 942 23 HOH HOH . X 8 HOH A 43 943 91 HOH HOH . X 8 HOH A 44 944 85 HOH HOH . X 8 HOH A 45 945 29 HOH HOH . X 8 HOH A 46 946 84 HOH HOH . X 8 HOH A 47 947 56 HOH HOH . X 8 HOH A 48 948 99 HOH HOH . X 8 HOH A 49 949 34 HOH HOH . X 8 HOH A 50 950 78 HOH HOH . X 8 HOH A 51 951 55 HOH HOH . X 8 HOH A 52 952 130 HOH HOH . X 8 HOH A 53 953 74 HOH HOH . Y 8 HOH B 1 901 107 HOH HOH . Y 8 HOH B 2 902 114 HOH HOH . Y 8 HOH B 3 903 123 HOH HOH . Y 8 HOH B 4 904 106 HOH HOH . Y 8 HOH B 5 905 120 HOH HOH . Y 8 HOH B 6 906 28 HOH HOH . Y 8 HOH B 7 907 35 HOH HOH . Y 8 HOH B 8 908 68 HOH HOH . Y 8 HOH B 9 909 24 HOH HOH . Y 8 HOH B 10 910 113 HOH HOH . Y 8 HOH B 11 911 54 HOH HOH . Y 8 HOH B 12 912 129 HOH HOH . Y 8 HOH B 13 913 7 HOH HOH . Y 8 HOH B 14 914 100 HOH HOH . Y 8 HOH B 15 915 20 HOH HOH . Y 8 HOH B 16 916 102 HOH HOH . Y 8 HOH B 17 917 119 HOH HOH . Y 8 HOH B 18 918 121 HOH HOH . Y 8 HOH B 19 919 90 HOH HOH . Y 8 HOH B 20 920 101 HOH HOH . Y 8 HOH B 21 921 64 HOH HOH . Y 8 HOH B 22 922 128 HOH HOH . Y 8 HOH B 23 923 41 HOH HOH . Y 8 HOH B 24 924 117 HOH HOH . Y 8 HOH B 25 925 125 HOH HOH . Y 8 HOH B 26 926 22 HOH HOH . Y 8 HOH B 27 927 9 HOH HOH . Y 8 HOH B 28 928 11 HOH HOH . Y 8 HOH B 29 929 40 HOH HOH . Y 8 HOH B 30 930 131 HOH HOH . Y 8 HOH B 31 931 12 HOH HOH . Y 8 HOH B 32 932 27 HOH HOH . Y 8 HOH B 33 933 26 HOH HOH . Y 8 HOH B 34 934 122 HOH HOH . Y 8 HOH B 35 935 80 HOH HOH . Y 8 HOH B 36 936 33 HOH HOH . Y 8 HOH B 37 937 25 HOH HOH . Y 8 HOH B 38 938 88 HOH HOH . Y 8 HOH B 39 939 5 HOH HOH . Y 8 HOH B 40 940 71 HOH HOH . Y 8 HOH B 41 941 109 HOH HOH . Y 8 HOH B 42 942 126 HOH HOH . Y 8 HOH B 43 943 110 HOH HOH . Y 8 HOH B 44 944 37 HOH HOH . Y 8 HOH B 45 945 52 HOH HOH . Y 8 HOH B 46 946 79 HOH HOH . Y 8 HOH B 47 947 36 HOH HOH . Y 8 HOH B 48 948 38 HOH HOH . Y 8 HOH B 49 949 50 HOH HOH . Y 8 HOH B 50 950 66 HOH HOH . Y 8 HOH B 51 951 61 HOH HOH . Y 8 HOH B 52 952 43 HOH HOH . Y 8 HOH B 53 953 86 HOH HOH . Y 8 HOH B 54 954 57 HOH HOH . Y 8 HOH B 55 955 19 HOH HOH . Y 8 HOH B 56 956 77 HOH HOH . Y 8 HOH B 57 957 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . W 6 50.357 55.074 16.312 1 132.21 ? S SO4 809 B 1 HETATM 2 O O1 SO4 . . . W 6 51.745 55.265 15.986 1 125.01 ? O1 SO4 809 B 1 HETATM 3 O O2 SO4 . . . W 6 49.697 54.395 15.229 1 125.55 ? O2 SO4 809 B 1 HETATM 4 O O3 SO4 . . . W 6 50.25 54.284 17.511 1 130.53 ? O3 SO4 809 B 1 HETATM 5 O O4 SO4 . . . W 6 49.734 56.354 16.525 1 133.47 ? O4 SO4 809 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #