data_9GR5
#
_model_server_result.job_id            Y2QkKALAVTyvS25i6Ke_OQ 
_model_server_result.datetime_utc      '2025-03-10 14:21:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9gr5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":101}' 
#
_entry.id    9GR5 
#
_exptl.entry_id    9GR5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-D-fructopyranose 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          119.264 
_cell.angle_gamma         90 
_cell.entry_id            9GR5 
_cell.length_a            43.725 
_cell.length_b            73.914 
_cell.length_c            43.732 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9GR5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                BDF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-D-fructopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-D-fructose;D-fructose;fructose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BDF sing 70 n n 
C1 O1 BDF sing 71 n n 
C1 H11 BDF sing 72 n n 
C1 H12 BDF sing 73 n n 
C2 C3 BDF sing 74 n n 
C2 O2 BDF sing 75 n n 
C2 O6 BDF sing 76 n n 
C3 C4 BDF sing 77 n n 
C3 O3 BDF sing 78 n n 
C3 H3 BDF sing 79 n n 
C4 C5 BDF sing 80 n n 
C4 O4 BDF sing 81 n n 
C4 H4 BDF sing 82 n n 
C5 C6 BDF sing 83 n n 
C5 O5 BDF sing 84 n n 
C5 H5 BDF sing 85 n n 
C6 O6 BDF sing 86 n n 
C6 H61 BDF sing 87 n n 
C6 H62 BDF sing 88 n n 
O1 HO1 BDF sing 89 n n 
O2 HO2 BDF sing 90 n n 
O3 HO3 BDF sing 91 n n 
O4 HO4 BDF sing 92 n n 
O5 HO5 BDF sing 93 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
BDF DFrupb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
BDF b-D-fructopyranose 'COMMON NAME' GMML 1 
BDF b-D-Frup 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
BDF Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     9GR5 
_atom_sites.fract_transf_matrix[1][1]    0.02287 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.012815 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013529 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026212 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 BDF A 1 101 101 BDF BDF . 
E 2 BDF A 1 102 201 BDF BDF . 
F 3 T3Y A 1 103 301 T3Y T3Y . 
G 2 BDF B 1 101 101 BDF BDF . 
H 2 BDF B 1 102 201 BDF BDF . 
I 3 T3Y C 1 301 301 T3Y T3Y . 
J 2 BDF C 1 302 101 BDF BDF . 
K 2 BDF C 1 303 201 BDF BDF . 
L 4 HOH A 1 201 120 HOH HOH . 
L 4 HOH A 2 202 134 HOH HOH . 
L 4 HOH A 3 203 250 HOH HOH . 
L 4 HOH A 4 204 228 HOH HOH . 
L 4 HOH A 5 205 53 HOH HOH . 
L 4 HOH A 6 206 52 HOH HOH . 
L 4 HOH A 7 207 186 HOH HOH . 
L 4 HOH A 8 208 248 HOH HOH . 
L 4 HOH A 9 209 94 HOH HOH . 
L 4 HOH A 10 210 21 HOH HOH . 
L 4 HOH A 11 211 231 HOH HOH . 
L 4 HOH A 12 212 46 HOH HOH . 
L 4 HOH A 13 213 191 HOH HOH . 
L 4 HOH A 14 214 87 HOH HOH . 
L 4 HOH A 15 215 92 HOH HOH . 
L 4 HOH A 16 216 19 HOH HOH . 
L 4 HOH A 17 217 67 HOH HOH . 
L 4 HOH A 18 218 11 HOH HOH . 
L 4 HOH A 19 219 119 HOH HOH . 
L 4 HOH A 20 220 170 HOH HOH . 
L 4 HOH A 21 221 129 HOH HOH . 
L 4 HOH A 22 222 1 HOH HOH . 
L 4 HOH A 23 223 55 HOH HOH . 
L 4 HOH A 24 224 50 HOH HOH . 
L 4 HOH A 25 225 130 HOH HOH . 
L 4 HOH A 26 226 71 HOH HOH . 
L 4 HOH A 27 227 68 HOH HOH . 
L 4 HOH A 28 228 48 HOH HOH . 
L 4 HOH A 29 229 101 HOH HOH . 
L 4 HOH A 30 230 66 HOH HOH . 
L 4 HOH A 31 231 40 HOH HOH . 
L 4 HOH A 32 232 133 HOH HOH . 
L 4 HOH A 33 233 261 HOH HOH . 
L 4 HOH A 34 234 118 HOH HOH . 
L 4 HOH A 35 235 187 HOH HOH . 
L 4 HOH A 36 236 166 HOH HOH . 
L 4 HOH A 37 237 241 HOH HOH . 
L 4 HOH A 38 238 61 HOH HOH . 
L 4 HOH A 39 239 102 HOH HOH . 
L 4 HOH A 40 240 96 HOH HOH . 
L 4 HOH A 41 241 205 HOH HOH . 
L 4 HOH A 42 242 59 HOH HOH . 
L 4 HOH A 43 243 143 HOH HOH . 
L 4 HOH A 44 244 195 HOH HOH . 
L 4 HOH A 45 245 218 HOH HOH . 
L 4 HOH A 46 246 47 HOH HOH . 
L 4 HOH A 47 247 81 HOH HOH . 
L 4 HOH A 48 248 197 HOH HOH . 
L 4 HOH A 49 249 243 HOH HOH . 
L 4 HOH A 50 250 117 HOH HOH . 
L 4 HOH A 51 251 16 HOH HOH . 
L 4 HOH A 52 252 100 HOH HOH . 
L 4 HOH A 53 253 179 HOH HOH . 
L 4 HOH A 54 254 216 HOH HOH . 
L 4 HOH A 55 255 62 HOH HOH . 
L 4 HOH A 56 256 41 HOH HOH . 
L 4 HOH A 57 257 112 HOH HOH . 
L 4 HOH A 58 258 153 HOH HOH . 
L 4 HOH A 59 259 98 HOH HOH . 
L 4 HOH A 60 260 15 HOH HOH . 
L 4 HOH A 61 261 172 HOH HOH . 
L 4 HOH A 62 262 151 HOH HOH . 
L 4 HOH A 63 263 167 HOH HOH . 
L 4 HOH A 64 264 194 HOH HOH . 
L 4 HOH A 65 265 193 HOH HOH . 
L 4 HOH A 66 266 115 HOH HOH . 
L 4 HOH A 67 267 35 HOH HOH . 
L 4 HOH A 68 268 203 HOH HOH . 
L 4 HOH A 69 269 192 HOH HOH . 
L 4 HOH A 70 270 105 HOH HOH . 
L 4 HOH A 71 271 174 HOH HOH . 
L 4 HOH A 72 272 225 HOH HOH . 
L 4 HOH A 73 273 268 HOH HOH . 
L 4 HOH A 74 274 212 HOH HOH . 
L 4 HOH A 75 275 204 HOH HOH . 
L 4 HOH A 76 276 214 HOH HOH . 
L 4 HOH A 77 277 196 HOH HOH . 
L 4 HOH A 78 278 140 HOH HOH . 
L 4 HOH A 79 279 255 HOH HOH . 
L 4 HOH A 80 280 99 HOH HOH . 
L 4 HOH A 81 281 58 HOH HOH . 
L 4 HOH A 82 282 207 HOH HOH . 
L 4 HOH A 83 283 202 HOH HOH . 
L 4 HOH A 84 284 242 HOH HOH . 
L 4 HOH A 85 285 114 HOH HOH . 
L 4 HOH A 86 286 182 HOH HOH . 
L 4 HOH A 87 287 181 HOH HOH . 
M 4 HOH B 1 201 56 HOH HOH . 
M 4 HOH B 2 202 152 HOH HOH . 
M 4 HOH B 3 203 74 HOH HOH . 
M 4 HOH B 4 204 39 HOH HOH . 
M 4 HOH B 5 205 17 HOH HOH . 
M 4 HOH B 6 206 60 HOH HOH . 
M 4 HOH B 7 207 90 HOH HOH . 
M 4 HOH B 8 208 38 HOH HOH . 
M 4 HOH B 9 209 31 HOH HOH . 
M 4 HOH B 10 210 131 HOH HOH . 
M 4 HOH B 11 211 127 HOH HOH . 
M 4 HOH B 12 212 22 HOH HOH . 
M 4 HOH B 13 213 77 HOH HOH . 
M 4 HOH B 14 214 149 HOH HOH . 
M 4 HOH B 15 215 266 HOH HOH . 
M 4 HOH B 16 216 44 HOH HOH . 
M 4 HOH B 17 217 169 HOH HOH . 
M 4 HOH B 18 218 5 HOH HOH . 
M 4 HOH B 19 219 209 HOH HOH . 
M 4 HOH B 20 220 126 HOH HOH . 
M 4 HOH B 21 221 34 HOH HOH . 
M 4 HOH B 22 222 111 HOH HOH . 
M 4 HOH B 23 223 137 HOH HOH . 
M 4 HOH B 24 224 180 HOH HOH . 
M 4 HOH B 25 225 156 HOH HOH . 
M 4 HOH B 26 226 54 HOH HOH . 
M 4 HOH B 27 227 24 HOH HOH . 
M 4 HOH B 28 228 132 HOH HOH . 
M 4 HOH B 29 229 36 HOH HOH . 
M 4 HOH B 30 230 178 HOH HOH . 
M 4 HOH B 31 231 224 HOH HOH . 
M 4 HOH B 32 232 20 HOH HOH . 
M 4 HOH B 33 233 144 HOH HOH . 
M 4 HOH B 34 234 116 HOH HOH . 
M 4 HOH B 35 235 245 HOH HOH . 
M 4 HOH B 36 236 154 HOH HOH . 
M 4 HOH B 37 237 135 HOH HOH . 
M 4 HOH B 38 238 220 HOH HOH . 
M 4 HOH B 39 239 183 HOH HOH . 
M 4 HOH B 40 240 107 HOH HOH . 
M 4 HOH B 41 241 18 HOH HOH . 
M 4 HOH B 42 242 258 HOH HOH . 
M 4 HOH B 43 243 91 HOH HOH . 
M 4 HOH B 44 244 80 HOH HOH . 
M 4 HOH B 45 245 113 HOH HOH . 
M 4 HOH B 46 246 240 HOH HOH . 
M 4 HOH B 47 247 185 HOH HOH . 
M 4 HOH B 48 248 45 HOH HOH . 
M 4 HOH B 49 249 75 HOH HOH . 
M 4 HOH B 50 250 210 HOH HOH . 
M 4 HOH B 51 251 64 HOH HOH . 
M 4 HOH B 52 252 106 HOH HOH . 
M 4 HOH B 53 253 26 HOH HOH . 
M 4 HOH B 54 254 79 HOH HOH . 
M 4 HOH B 55 255 72 HOH HOH . 
M 4 HOH B 56 256 161 HOH HOH . 
M 4 HOH B 57 257 168 HOH HOH . 
M 4 HOH B 58 258 13 HOH HOH . 
M 4 HOH B 59 259 97 HOH HOH . 
M 4 HOH B 60 260 198 HOH HOH . 
M 4 HOH B 61 261 265 HOH HOH . 
M 4 HOH B 62 262 229 HOH HOH . 
M 4 HOH B 63 263 234 HOH HOH . 
M 4 HOH B 64 264 150 HOH HOH . 
M 4 HOH B 65 265 260 HOH HOH . 
M 4 HOH B 66 266 158 HOH HOH . 
M 4 HOH B 67 267 226 HOH HOH . 
M 4 HOH B 68 268 206 HOH HOH . 
M 4 HOH B 69 269 175 HOH HOH . 
M 4 HOH B 70 270 176 HOH HOH . 
M 4 HOH B 71 271 257 HOH HOH . 
M 4 HOH B 72 272 227 HOH HOH . 
M 4 HOH B 73 273 108 HOH HOH . 
N 4 HOH C 1 401 146 HOH HOH . 
N 4 HOH C 2 402 213 HOH HOH . 
N 4 HOH C 3 403 177 HOH HOH . 
N 4 HOH C 4 404 83 HOH HOH . 
N 4 HOH C 5 405 49 HOH HOH . 
N 4 HOH C 6 406 189 HOH HOH . 
N 4 HOH C 7 407 88 HOH HOH . 
N 4 HOH C 8 408 70 HOH HOH . 
N 4 HOH C 9 409 14 HOH HOH . 
N 4 HOH C 10 410 33 HOH HOH . 
N 4 HOH C 11 411 2 HOH HOH . 
N 4 HOH C 12 412 3 HOH HOH . 
N 4 HOH C 13 413 51 HOH HOH . 
N 4 HOH C 14 414 222 HOH HOH . 
N 4 HOH C 15 415 208 HOH HOH . 
N 4 HOH C 16 416 76 HOH HOH . 
N 4 HOH C 17 417 42 HOH HOH . 
N 4 HOH C 18 418 199 HOH HOH . 
N 4 HOH C 19 419 6 HOH HOH . 
N 4 HOH C 20 420 9 HOH HOH . 
N 4 HOH C 21 421 30 HOH HOH . 
N 4 HOH C 22 422 10 HOH HOH . 
N 4 HOH C 23 423 85 HOH HOH . 
N 4 HOH C 24 424 104 HOH HOH . 
N 4 HOH C 25 425 162 HOH HOH . 
N 4 HOH C 26 426 109 HOH HOH . 
N 4 HOH C 27 427 230 HOH HOH . 
N 4 HOH C 28 428 12 HOH HOH . 
N 4 HOH C 29 429 95 HOH HOH . 
N 4 HOH C 30 430 128 HOH HOH . 
N 4 HOH C 31 431 121 HOH HOH . 
N 4 HOH C 32 432 4 HOH HOH . 
N 4 HOH C 33 433 201 HOH HOH . 
N 4 HOH C 34 434 43 HOH HOH . 
N 4 HOH C 35 435 28 HOH HOH . 
N 4 HOH C 36 436 125 HOH HOH . 
N 4 HOH C 37 437 84 HOH HOH . 
N 4 HOH C 38 438 159 HOH HOH . 
N 4 HOH C 39 439 57 HOH HOH . 
N 4 HOH C 40 440 145 HOH HOH . 
N 4 HOH C 41 441 29 HOH HOH . 
N 4 HOH C 42 442 139 HOH HOH . 
N 4 HOH C 43 443 78 HOH HOH . 
N 4 HOH C 44 444 122 HOH HOH . 
N 4 HOH C 45 445 164 HOH HOH . 
N 4 HOH C 46 446 215 HOH HOH . 
N 4 HOH C 47 447 163 HOH HOH . 
N 4 HOH C 48 448 23 HOH HOH . 
N 4 HOH C 49 449 256 HOH HOH . 
N 4 HOH C 50 450 7 HOH HOH . 
N 4 HOH C 51 451 69 HOH HOH . 
N 4 HOH C 52 452 142 HOH HOH . 
N 4 HOH C 53 453 32 HOH HOH . 
N 4 HOH C 54 454 65 HOH HOH . 
N 4 HOH C 55 455 63 HOH HOH . 
N 4 HOH C 56 456 103 HOH HOH . 
N 4 HOH C 57 457 27 HOH HOH . 
N 4 HOH C 58 458 148 HOH HOH . 
N 4 HOH C 59 459 8 HOH HOH . 
N 4 HOH C 60 460 237 HOH HOH . 
N 4 HOH C 61 461 147 HOH HOH . 
N 4 HOH C 62 462 136 HOH HOH . 
N 4 HOH C 63 463 171 HOH HOH . 
N 4 HOH C 64 464 89 HOH HOH . 
N 4 HOH C 65 465 157 HOH HOH . 
N 4 HOH C 66 466 82 HOH HOH . 
N 4 HOH C 67 467 263 HOH HOH . 
N 4 HOH C 68 468 219 HOH HOH . 
N 4 HOH C 69 469 267 HOH HOH . 
N 4 HOH C 70 470 252 HOH HOH . 
N 4 HOH C 71 471 123 HOH HOH . 
N 4 HOH C 72 472 221 HOH HOH . 
N 4 HOH C 73 473 262 HOH HOH . 
N 4 HOH C 74 474 188 HOH HOH . 
N 4 HOH C 75 475 165 HOH HOH . 
N 4 HOH C 76 476 160 HOH HOH . 
N 4 HOH C 77 477 86 HOH HOH . 
N 4 HOH C 78 478 244 HOH HOH . 
N 4 HOH C 79 479 73 HOH HOH . 
N 4 HOH C 80 480 25 HOH HOH . 
N 4 HOH C 81 481 37 HOH HOH . 
N 4 HOH C 82 482 246 HOH HOH . 
N 4 HOH C 83 483 138 HOH HOH . 
N 4 HOH C 84 484 190 HOH HOH . 
N 4 HOH C 85 485 124 HOH HOH . 
N 4 HOH C 86 486 200 HOH HOH . 
N 4 HOH C 87 487 173 HOH HOH . 
N 4 HOH C 88 488 254 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BDF . . . G 2 -6.926 6.368 28.535 1 26.47 ? C1 BDF 101 B 1 
HETATM 2 C C2 BDF . . . G 2 -7.991 6.233 27.459 1 26.8 ? C2 BDF 101 B 1 
HETATM 3 C C3 BDF . . . G 2 -8.203 4.744 27.163 1 25.3 ? C3 BDF 101 B 1 
HETATM 4 C C4 BDF . . . G 2 -9.111 4.561 25.953 1 21.92 ? C4 BDF 101 B 1 
HETATM 5 C C5 BDF . . . G 2 -8.55 5.328 24.763 1 22.29 ? C5 BDF 101 B 1 
HETATM 6 C C6 BDF . . . G 2 -8.343 6.78 25.15 1 21.4 ? C6 BDF 101 B 1 
HETATM 7 O O1 BDF . . . G 2 -6.546 7.711 28.763 1 35.06 ? O1 BDF 101 B 1 
HETATM 8 O O2 BDF . . . G 2 -9.22 6.792 27.849 1 22.44 ? O2 BDF 101 B 1 
HETATM 9 O O3 BDF . . . G 2 -8.739 4.104 28.314 1 22.2 ? O3 BDF 101 B 1 
HETATM 10 O O4 BDF . . . G 2 -9.239 3.172 25.667 1 20.82 ? O4 BDF 101 B 1 
HETATM 11 O O5 BDF . . . G 2 -7.288 4.795 24.353 1 21.04 ? O5 BDF 101 B 1 
HETATM 12 O O6 BDF . . . G 2 -7.486 6.889 26.298 1 23.98 ? O6 BDF 101 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#