data_9GRO
#
_model_server_result.job_id            ASPI3XXguBURlFUE472-jw 
_model_server_result.datetime_utc      '2025-07-27 12:27:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9gro 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":1204}' 
#
_entry.id    9GRO 
#
_exptl.entry_id    9GRO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              134.174 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-hexane-1,2,6-triol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9GRO 
_cell.length_a            114.586 
_cell.length_b            114.586 
_cell.length_c            172.179 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9GRO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,GA 1 1 
B,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,HA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 V N N 
? 8 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 260 A CYS 793 1_555 B SG CYS 260 B CYS 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A NE2 HIS 118 A HIS 651 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc2 A OE2 GLU 263 A GLU 796 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? 
metalc ? metalc3 A ND1 HIS 303 A HIS 836 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc4 A ND1 HIS 464 A HIS 1064 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc5 B NE2 HIS 118 B HIS 651 1_555 U ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc6 B OE2 GLU 263 B GLU 796 1_555 U ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc7 B ND1 HIS 303 B HIS 836 1_555 U ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc8 B ND1 HIS 464 B HIS 1064 1_555 U ZN ZN . B ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
#
_chem_comp.formula           'C6 H14 O3' 
_chem_comp.formula_weight    134.174 
_chem_comp.id                1JW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-hexane-1,2,6-triol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (-)-1,2,6-Hexanetriol;6999990 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O09 C06 1JW sing 1 n n 
O04 C03 1JW sing 2 n n 
C03 C02 1JW sing 3 n n 
C06 C05 1JW sing 4 n n 
C06 C07 1JW sing 5 n n 
O08 C07 1JW sing 6 n n 
C01 C05 1JW sing 7 n n 
C01 C02 1JW sing 8 n n 
C01 H1 1JW sing 9 n n 
C01 H2 1JW sing 10 n n 
C02 H3 1JW sing 11 n n 
C02 H4 1JW sing 12 n n 
C03 H5 1JW sing 13 n n 
C03 H6 1JW sing 14 n n 
O04 H7 1JW sing 15 n n 
C05 H8 1JW sing 16 n n 
C05 H9 1JW sing 17 n n 
C06 H10 1JW sing 18 n n 
C07 H11 1JW sing 19 n n 
C07 H12 1JW sing 20 n n 
O08 H13 1JW sing 21 n n 
O09 H14 1JW sing 22 n n 
#
_atom_sites.entry_id                     9GRO 
_atom_sites.fract_transf_matrix[1][1]    0.008727 
_atom_sites.fract_transf_matrix[1][2]    0.005039 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010077 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005808 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1201 2000 ZN ZN . 
D 3 SPM A 1 1202 2001 SPM SPM . 
E 3 SPM A 1 1203 2002 SPM SPM . 
F 4 ORN A 1 1204 2003 ORN ORN . 
G 5 PUT A 1 1205 2004 PUT PUT . 
H 5 PUT A 1 1206 2005 PUT PUT . 
I 6 EDO A 1 1207 2006 EDO EDO . 
J 6 EDO A 1 1208 2007 EDO EDO . 
K 6 EDO A 1 1209 2008 EDO EDO . 
L 6 EDO A 1 1210 2009 EDO EDO . 
M 6 EDO A 1 1211 2010 EDO EDO . 
N 5 PUT A 1 1212 2011 PUT PUT . 
O 6 EDO A 1 1213 2012 EDO EDO . 
P 6 EDO A 1 1214 2013 EDO EDO . 
Q 7 I8P A 1 1215 3000 I8P I8P . 
R 6 EDO A 1 1216 3001 EDO EDO . 
S 6 EDO A 1 1217 3002 EDO EDO . 
T 5 PUT A 1 1218 3003 PUT PUT . 
U 2 ZN B 1 1201 2000 ZN ZN . 
V 8 1JW B 1 1202 2001 1JW 1JW . 
W 5 PUT B 1 1203 2002 PUT PUT . 
X 8 1JW B 1 1204 2003 1JW 1JW . 
Y 6 EDO B 1 1205 2004 EDO EDO . 
Z 6 EDO B 1 1206 2005 EDO EDO . 
AA 6 EDO B 1 1207 2006 EDO EDO . 
BA 5 PUT B 1 1208 2007 PUT PUT . 
CA 6 EDO B 1 1209 2008 EDO EDO . 
DA 7 I8P B 1 1210 3000 I8P I8P . 
EA 6 EDO B 1 1211 3001 EDO EDO . 
FA 6 EDO B 1 1212 3003 EDO EDO . 
GA 9 HOH A 1 1301 50 HOH HOH . 
GA 9 HOH A 2 1302 19 HOH HOH . 
GA 9 HOH A 3 1303 5 HOH HOH . 
GA 9 HOH A 4 1304 45 HOH HOH . 
GA 9 HOH A 5 1305 33 HOH HOH . 
GA 9 HOH A 6 1306 48 HOH HOH . 
GA 9 HOH A 7 1307 30 HOH HOH . 
GA 9 HOH A 8 1308 25 HOH HOH . 
GA 9 HOH A 9 1309 1 HOH HOH . 
GA 9 HOH A 10 1310 3 HOH HOH . 
GA 9 HOH A 11 1311 23 HOH HOH . 
GA 9 HOH A 12 1312 24 HOH HOH . 
GA 9 HOH A 13 1313 51 HOH HOH . 
GA 9 HOH A 14 1314 29 HOH HOH . 
GA 9 HOH A 15 1315 41 HOH HOH . 
GA 9 HOH A 16 1316 10 HOH HOH . 
GA 9 HOH A 17 1317 35 HOH HOH . 
GA 9 HOH A 18 1318 26 HOH HOH . 
GA 9 HOH A 19 1319 15 HOH HOH . 
GA 9 HOH A 20 1320 34 HOH HOH . 
GA 9 HOH A 21 1321 37 HOH HOH . 
GA 9 HOH A 22 1322 9 HOH HOH . 
GA 9 HOH A 23 1323 7 HOH HOH . 
GA 9 HOH A 24 1324 40 HOH HOH . 
GA 9 HOH A 25 1325 8 HOH HOH . 
GA 9 HOH A 26 1326 2 HOH HOH . 
GA 9 HOH A 27 1327 46 HOH HOH . 
HA 9 HOH B 1 1301 11 HOH HOH . 
HA 9 HOH B 2 1302 44 HOH HOH . 
HA 9 HOH B 3 1303 17 HOH HOH . 
HA 9 HOH B 4 1304 36 HOH HOH . 
HA 9 HOH B 5 1305 49 HOH HOH . 
HA 9 HOH B 6 1306 12 HOH HOH . 
HA 9 HOH B 7 1307 22 HOH HOH . 
HA 9 HOH B 8 1308 32 HOH HOH . 
HA 9 HOH B 9 1309 6 HOH HOH . 
HA 9 HOH B 10 1310 16 HOH HOH . 
HA 9 HOH B 11 1311 39 HOH HOH . 
HA 9 HOH B 12 1312 4 HOH HOH . 
HA 9 HOH B 13 1313 13 HOH HOH . 
HA 9 HOH B 14 1314 20 HOH HOH . 
HA 9 HOH B 15 1315 47 HOH HOH . 
HA 9 HOH B 16 1316 18 HOH HOH . 
HA 9 HOH B 17 1317 42 HOH HOH . 
HA 9 HOH B 18 1318 21 HOH HOH . 
HA 9 HOH B 19 1319 14 HOH HOH . 
HA 9 HOH B 20 1320 27 HOH HOH . 
HA 9 HOH B 21 1321 31 HOH HOH . 
HA 9 HOH B 22 1322 43 HOH HOH . 
HA 9 HOH B 23 1323 28 HOH HOH . 
HA 9 HOH B 24 1324 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 1JW . . . X 8 40.421 -34.504 -17.622 1 91.64 ? C01 1JW 1204 B 1 
HETATM 2 C C02 1JW . . . X 8 41.205 -35.803 -17.483 1 83.26 ? C02 1JW 1204 B 1 
HETATM 3 C C03 1JW . . . X 8 40.235 -36.986 -17.563 1 85.63 ? C03 1JW 1204 B 1 
HETATM 4 O O04 1JW . . . X 8 39.407 -36.922 -16.441 1 81.63 ? O04 1JW 1204 B 1 
HETATM 5 C C05 1JW . . . X 8 41.202 -33.27 -17.193 1 92.91 ? C05 1JW 1204 B 1 
HETATM 6 C C06 1JW . . . X 8 42.018 -32.739 -18.364 1 104.41 ? C06 1JW 1204 B 1 
HETATM 7 C C07 1JW . . . X 8 41.175 -31.832 -19.277 1 101.22 ? C07 1JW 1204 B 1 
HETATM 8 O O08 1JW . . . X 8 41.148 -32.513 -20.498 1 74.12 ? O08 1JW 1204 B 1 
HETATM 9 O O09 1JW . . . X 8 43.044 -31.974 -17.803 1 91.64 ? O09 1JW 1204 B 1 
HETATM 10 H H1 1JW . . . X 8 39.484 -34.57 -17.035 1 110.23 ? H1 1JW 1204 B 1 
HETATM 11 H H2 1JW . . . X 8 40.086 -34.382 -18.671 1 110.23 ? H2 1JW 1204 B 1 
HETATM 12 H H3 1JW . . . X 8 41.986 -35.89 -18.264 1 100.16 ? H3 1JW 1204 B 1 
HETATM 13 H H4 1JW . . . X 8 41.772 -35.833 -16.531 1 100.16 ? H4 1JW 1204 B 1 
HETATM 14 H H5 1JW . . . X 8 40.79 -37.953 -17.602 1 103.02 ? H5 1JW 1204 B 1 
HETATM 15 H H6 1JW . . . X 8 39.642 -36.95 -18.507 1 103.02 ? H6 1JW 1204 B 1 
HETATM 16 H H7 1JW . . . X 8 38.727 -37.587 -16.56 1 98.21 ? H7 1JW 1204 B 1 
HETATM 17 H H8 1JW . . . X 8 41.868 -33.502 -16.338 1 111.74 ? H8 1JW 1204 B 1 
HETATM 18 H H9 1JW . . . X 8 40.519 -32.482 -16.815 1 111.74 ? H9 1JW 1204 B 1 
HETATM 19 H H10 1JW . . . X 8 42.407 -33.594 -18.977 1 125.55 ? H10 1JW 1204 B 1 
HETATM 20 H H11 1JW . . . X 8 41.629 -30.824 -19.377 1 121.72 ? H11 1JW 1204 B 1 
HETATM 21 H H12 1JW . . . X 8 40.155 -31.679 -18.867 1 121.72 ? H12 1JW 1204 B 1 
HETATM 22 H H13 1JW . . . X 8 40.744 -31.929 -21.134 1 89.2 ? H13 1JW 1204 B 1 
HETATM 23 H H14 1JW . . . X 8 43.589 -31.674 -18.531 1 110.22 ? H14 1JW 1204 B 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#