data_9GRU # _model_server_result.job_id P9pJpTNKfigkIYJAvgPZ_g _model_server_result.datetime_utc '2024-11-07 08:35:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gru # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 9GRU # _exptl.entry_id 9GRU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.974 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-IODOPYRAZOLE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GRU _cell.length_a 41.091 _cell.length_b 41.988 _cell.length_c 159.955 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GRU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,L 1 1 B,G,H,I,M 2 1 C,J,K,N 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 J N N # _chem_comp.formula 'C3 H3 I N2' _chem_comp.formula_weight 193.974 _chem_comp.id PYZ _chem_comp.mon_nstd_flag . _chem_comp.name 4-IODOPYRAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 PYZ sing 277 n y N1 C5 PYZ sing 278 n y N1 HN1 PYZ sing 279 n n N2 C3 PYZ doub 280 n y C3 C4 PYZ sing 281 n y C3 H3 PYZ sing 282 n n C4 I4 PYZ sing 283 n n C4 C5 PYZ doub 284 n y C5 H5 PYZ sing 285 n n # _atom_sites.entry_id 9GRU _atom_sites.fract_transf_matrix[1][1] 0.024336 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006252 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PYZ A 1 101 101 PYZ C30 . E 3 SO4 A 1 102 2 SO4 SO4 . F 3 SO4 A 1 103 3 SO4 SO4 . G 2 PYZ B 1 101 101 PYZ C30 . H 3 SO4 B 1 102 4 SO4 SO4 . I 3 SO4 B 1 103 5 SO4 SO4 . J 2 PYZ C 1 101 101 PYZ C30 . K 3 SO4 C 1 102 6 SO4 SO4 . L 4 HOH A 1 201 98 HOH HOH . L 4 HOH A 2 202 22 HOH HOH . L 4 HOH A 3 203 123 HOH HOH . L 4 HOH A 4 204 212 HOH HOH . L 4 HOH A 5 205 61 HOH HOH . L 4 HOH A 6 206 86 HOH HOH . L 4 HOH A 7 207 266 HOH HOH . L 4 HOH A 8 208 236 HOH HOH . L 4 HOH A 9 209 84 HOH HOH . L 4 HOH A 10 210 115 HOH HOH . L 4 HOH A 11 211 181 HOH HOH . L 4 HOH A 12 212 2 HOH HOH . L 4 HOH A 13 213 26 HOH HOH . L 4 HOH A 14 214 90 HOH HOH . L 4 HOH A 15 215 97 HOH HOH . L 4 HOH A 16 216 231 HOH HOH . L 4 HOH A 17 217 8 HOH HOH . L 4 HOH A 18 218 23 HOH HOH . L 4 HOH A 19 219 89 HOH HOH . L 4 HOH A 20 220 32 HOH HOH . L 4 HOH A 21 221 11 HOH HOH . L 4 HOH A 22 222 65 HOH HOH . L 4 HOH A 23 223 241 HOH HOH . L 4 HOH A 24 224 7 HOH HOH . L 4 HOH A 25 225 31 HOH HOH . L 4 HOH A 26 226 103 HOH HOH . L 4 HOH A 27 227 33 HOH HOH . L 4 HOH A 28 228 1 HOH HOH . L 4 HOH A 29 229 37 HOH HOH . L 4 HOH A 30 230 35 HOH HOH . L 4 HOH A 31 231 12 HOH HOH . L 4 HOH A 32 232 148 HOH HOH . L 4 HOH A 33 233 18 HOH HOH . L 4 HOH A 34 234 199 HOH HOH . L 4 HOH A 35 235 155 HOH HOH . L 4 HOH A 36 236 81 HOH HOH . L 4 HOH A 37 237 278 HOH HOH . L 4 HOH A 38 238 9 HOH HOH . L 4 HOH A 39 239 152 HOH HOH . L 4 HOH A 40 240 21 HOH HOH . L 4 HOH A 41 241 30 HOH HOH . L 4 HOH A 42 242 80 HOH HOH . L 4 HOH A 43 243 99 HOH HOH . L 4 HOH A 44 244 269 HOH HOH . L 4 HOH A 45 245 279 HOH HOH . L 4 HOH A 46 246 250 HOH HOH . L 4 HOH A 47 247 95 HOH HOH . L 4 HOH A 48 248 178 HOH HOH . L 4 HOH A 49 249 281 HOH HOH . L 4 HOH A 50 250 156 HOH HOH . L 4 HOH A 51 251 109 HOH HOH . L 4 HOH A 52 252 283 HOH HOH . L 4 HOH A 53 253 42 HOH HOH . L 4 HOH A 54 254 230 HOH HOH . L 4 HOH A 55 255 218 HOH HOH . L 4 HOH A 56 256 20 HOH HOH . L 4 HOH A 57 257 263 HOH HOH . L 4 HOH A 58 258 136 HOH HOH . L 4 HOH A 59 259 149 HOH HOH . L 4 HOH A 60 260 210 HOH HOH . L 4 HOH A 61 261 75 HOH HOH . L 4 HOH A 62 262 244 HOH HOH . M 4 HOH B 1 201 276 HOH HOH . M 4 HOH B 2 202 274 HOH HOH . M 4 HOH B 3 203 46 HOH HOH . M 4 HOH B 4 204 17 HOH HOH . M 4 HOH B 5 205 271 HOH HOH . M 4 HOH B 6 206 102 HOH HOH . M 4 HOH B 7 207 6 HOH HOH . M 4 HOH B 8 208 79 HOH HOH . M 4 HOH B 9 209 93 HOH HOH . M 4 HOH B 10 210 10 HOH HOH . M 4 HOH B 11 211 195 HOH HOH . M 4 HOH B 12 212 277 HOH HOH . M 4 HOH B 13 213 234 HOH HOH . M 4 HOH B 14 214 105 HOH HOH . M 4 HOH B 15 215 24 HOH HOH . M 4 HOH B 16 216 138 HOH HOH . M 4 HOH B 17 217 69 HOH HOH . M 4 HOH B 18 218 219 HOH HOH . M 4 HOH B 19 219 13 HOH HOH . M 4 HOH B 20 220 5 HOH HOH . M 4 HOH B 21 221 100 HOH HOH . M 4 HOH B 22 222 48 HOH HOH . M 4 HOH B 23 223 280 HOH HOH . M 4 HOH B 24 224 36 HOH HOH . M 4 HOH B 25 225 122 HOH HOH . M 4 HOH B 26 226 108 HOH HOH . M 4 HOH B 27 227 162 HOH HOH . M 4 HOH B 28 228 74 HOH HOH . M 4 HOH B 29 229 146 HOH HOH . M 4 HOH B 30 230 133 HOH HOH . M 4 HOH B 31 231 134 HOH HOH . M 4 HOH B 32 232 44 HOH HOH . M 4 HOH B 33 233 257 HOH HOH . M 4 HOH B 34 234 141 HOH HOH . M 4 HOH B 35 235 57 HOH HOH . M 4 HOH B 36 236 62 HOH HOH . M 4 HOH B 37 237 76 HOH HOH . M 4 HOH B 38 238 194 HOH HOH . M 4 HOH B 39 239 78 HOH HOH . M 4 HOH B 40 240 174 HOH HOH . M 4 HOH B 41 241 82 HOH HOH . M 4 HOH B 42 242 111 HOH HOH . M 4 HOH B 43 243 201 HOH HOH . N 4 HOH C 1 201 135 HOH HOH . N 4 HOH C 2 202 15 HOH HOH . N 4 HOH C 3 203 70 HOH HOH . N 4 HOH C 4 204 27 HOH HOH . N 4 HOH C 5 205 49 HOH HOH . N 4 HOH C 6 206 285 HOH HOH . N 4 HOH C 7 207 4 HOH HOH . N 4 HOH C 8 208 94 HOH HOH . N 4 HOH C 9 209 127 HOH HOH . N 4 HOH C 10 210 220 HOH HOH . N 4 HOH C 11 211 159 HOH HOH . N 4 HOH C 12 212 191 HOH HOH . N 4 HOH C 13 213 45 HOH HOH . N 4 HOH C 14 214 131 HOH HOH . N 4 HOH C 15 215 52 HOH HOH . N 4 HOH C 16 216 54 HOH HOH . N 4 HOH C 17 217 142 HOH HOH . N 4 HOH C 18 218 66 HOH HOH . N 4 HOH C 19 219 126 HOH HOH . N 4 HOH C 20 220 245 HOH HOH . N 4 HOH C 21 221 68 HOH HOH . N 4 HOH C 22 222 252 HOH HOH . N 4 HOH C 23 223 158 HOH HOH . N 4 HOH C 24 224 143 HOH HOH . N 4 HOH C 25 225 284 HOH HOH . N 4 HOH C 26 226 157 HOH HOH . N 4 HOH C 27 227 242 HOH HOH . N 4 HOH C 28 228 41 HOH HOH . N 4 HOH C 29 229 275 HOH HOH . N 4 HOH C 30 230 208 HOH HOH . N 4 HOH C 31 231 221 HOH HOH . N 4 HOH C 32 232 173 HOH HOH . N 4 HOH C 33 233 282 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PYZ . . . D 2 2.861 -25.133 -4.7 0.7 31.88 ? N1 PYZ 101 A 1 HETATM 2 N N2 PYZ . . . D 2 3.627 -25.037 -3.593 0.7 34.09 ? N2 PYZ 101 A 1 HETATM 3 C C3 PYZ . . . D 2 2.841 -24.461 -2.69 0.7 29.71 ? C3 PYZ 101 A 1 HETATM 4 C C4 PYZ . . . D 2 1.588 -24.189 -3.214 0.7 30 ? C4 PYZ 101 A 1 HETATM 5 I I4 PYZ . . . D 2 -0.02 -23.287 -2.274 0.7 27.88 ? I4 PYZ 101 A 1 HETATM 6 C C5 PYZ . . . D 2 1.632 -24.636 -4.516 0.7 28.95 ? C5 PYZ 101 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #