data_9GTG # _model_server_result.job_id I9VGischA5auLEgl6bKBhw _model_server_result.datetime_utc '2025-07-17 13:22:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gtg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 9GTG # _exptl.entry_id 9GTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 277.706 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description (5R)-5-[(7-chloro-1H-indol-3-yl)methyl]-3-methylimidazolidine-2,4-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GTG _cell.length_a 47.084 _cell.length_b 96.491 _cell.length_c 129.002 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C13 H12 Cl N3 O2' _chem_comp.formula_weight 277.706 _chem_comp.id RCM _chem_comp.mon_nstd_flag . _chem_comp.name (5R)-5-[(7-chloro-1H-indol-3-yl)methyl]-3-methylimidazolidine-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 N3 RCM sing 335 n n CL1 C4 RCM sing 336 n n N3 C12 RCM sing 337 n n N3 C14 RCM sing 338 n n N1 C8 RCM sing 339 n y N1 C3 RCM sing 340 n y O1 C12 RCM doub 341 n n C8 C7 RCM doub 342 n y O2 C14 RCM doub 343 n n C12 C11 RCM sing 344 n n C4 C3 RCM doub 345 n y C4 C5 RCM sing 346 n y C3 C2 RCM sing 347 n y C14 N2 RCM sing 348 n n C7 C2 RCM sing 349 n y C7 C10 RCM sing 350 n n C5 C6 RCM doub 351 n y C2 C1 RCM doub 352 n y C11 N2 RCM sing 353 n n C11 C10 RCM sing 354 n n C6 C1 RCM sing 355 n y C17 H1 RCM sing 356 n n C17 H2 RCM sing 357 n n C17 H3 RCM sing 358 n n N2 H4 RCM sing 359 n n C11 H5 RCM sing 360 n n C10 H6 RCM sing 361 n n C10 H7 RCM sing 362 n n C8 H8 RCM sing 363 n n N1 H9 RCM sing 364 n n C5 H10 RCM sing 365 n n C6 H11 RCM sing 366 n n C1 H12 RCM sing 367 n n # _atom_sites.entry_id 9GTG _atom_sites.fract_transf_matrix[1][1] 0.021239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RCM A 1 301 301 RCM NEC . D 3 A1IPG A 1 302 401 A1IPG INH . E 3 A1IPG B 1 301 301 A1IPG INH . F 2 RCM B 1 302 401 RCM NEC . G 4 HOH A 1 401 25 HOH HOH . G 4 HOH A 2 402 6 HOH HOH . G 4 HOH A 3 403 1 HOH HOH . G 4 HOH A 4 404 47 HOH HOH . G 4 HOH A 5 405 33 HOH HOH . G 4 HOH A 6 406 22 HOH HOH . G 4 HOH A 7 407 41 HOH HOH . H 4 HOH B 1 401 30 HOH HOH . H 4 HOH B 2 402 7 HOH HOH . H 4 HOH B 3 403 8 HOH HOH . H 4 HOH B 4 404 3 HOH HOH . H 4 HOH B 5 405 2 HOH HOH . H 4 HOH B 6 406 23 HOH HOH . H 4 HOH B 7 407 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 RCM . . . C 2 24.573 -3.509 10.629 1 64.67 ? O2 RCM 301 A 1 HETATM 2 C C14 RCM . . . C 2 25.626 -4.062 10.833 1 63.82 ? C14 RCM 301 A 1 HETATM 3 N N3 RCM . . . C 2 26.329 -4.767 9.916 1 68.82 ? N3 RCM 301 A 1 HETATM 4 C C17 RCM . . . C 2 26.004 -4.975 8.494 1 53.68 ? C17 RCM 301 A 1 HETATM 5 C C12 RCM . . . C 2 27.435 -5.273 10.497 1 61.91 ? C12 RCM 301 A 1 HETATM 6 O O1 RCM . . . C 2 28.252 -5.995 9.982 1 64.04 ? O1 RCM 301 A 1 HETATM 7 N N2 RCM . . . C 2 26.193 -4.023 12.047 1 58.22 ? N2 RCM 301 A 1 HETATM 8 C C11 RCM . . . C 2 27.399 -4.839 11.947 1 55.94 ? C11 RCM 301 A 1 HETATM 9 C C10 RCM . . . C 2 28.646 -4.146 12.41 1 49.13 ? C10 RCM 301 A 1 HETATM 10 C C7 RCM . . . C 2 28.842 -2.864 11.671 1 71.43 ? C7 RCM 301 A 1 HETATM 11 C C2 RCM . . . C 2 28.231 -1.577 12.009 1 64.72 ? C2 RCM 301 A 1 HETATM 12 C C8 RCM . . . C 2 29.653 -2.644 10.606 1 68.78 ? C8 RCM 301 A 1 HETATM 13 N N1 RCM . . . C 2 29.622 -1.324 10.236 1 64.47 ? N1 RCM 301 A 1 HETATM 14 C C3 RCM . . . C 2 28.752 -0.667 11.087 1 69.28 ? C3 RCM 301 A 1 HETATM 15 C C4 RCM . . . C 2 28.334 0.631 11.168 1 64.1 ? C4 RCM 301 A 1 HETATM 16 CL CL1 RCM . . . C 2 29.011 1.717 10.062 1 81.43 ? CL1 RCM 301 A 1 HETATM 17 C C5 RCM . . . C 2 27.466 1.061 12.126 1 71.48 ? C5 RCM 301 A 1 HETATM 18 C C6 RCM . . . C 2 26.949 0.137 13.014 1 72.69 ? C6 RCM 301 A 1 HETATM 19 C C1 RCM . . . C 2 27.327 -1.162 12.957 1 61.66 ? C1 RCM 301 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #