data_9GYA # _model_server_result.job_id PMaawb-CUBW7-0hvCUazpw _model_server_result.datetime_utc '2024-12-16 02:39:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 9GYA # _exptl.entry_id 9GYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9GYA _cell.length_a 65.92 _cell.length_b 65.92 _cell.length_c 263.57 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -32.96 57.088395 -43.928333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 72 n n C OXT ACT sing 73 n n C CH3 ACT sing 74 n n CH3 H1 ACT sing 75 n n CH3 H2 ACT sing 76 n n CH3 H3 ACT sing 77 n n # _atom_sites.entry_id 9GYA _atom_sites.fract_transf_matrix[1][1] 0.01517 _atom_sites.fract_transf_matrix[1][2] 0.008758 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003794 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT A 1 501 502 ACT ACT . D 4 A1IQQ A 1 502 1 A1IQQ XXX . E 5 HOH A 1 601 136 HOH HOH . E 5 HOH A 2 602 122 HOH HOH . E 5 HOH A 3 603 170 HOH HOH . E 5 HOH A 4 604 152 HOH HOH . E 5 HOH A 5 605 165 HOH HOH . E 5 HOH A 6 606 153 HOH HOH . E 5 HOH A 7 607 168 HOH HOH . E 5 HOH A 8 608 120 HOH HOH . E 5 HOH A 9 609 12 HOH HOH . E 5 HOH A 10 610 145 HOH HOH . E 5 HOH A 11 611 130 HOH HOH . E 5 HOH A 12 612 42 HOH HOH . E 5 HOH A 13 613 16 HOH HOH . E 5 HOH A 14 614 110 HOH HOH . E 5 HOH A 15 615 92 HOH HOH . E 5 HOH A 16 616 96 HOH HOH . E 5 HOH A 17 617 7 HOH HOH . E 5 HOH A 18 618 103 HOH HOH . E 5 HOH A 19 619 140 HOH HOH . E 5 HOH A 20 620 113 HOH HOH . E 5 HOH A 21 621 151 HOH HOH . E 5 HOH A 22 622 123 HOH HOH . E 5 HOH A 23 623 66 HOH HOH . E 5 HOH A 24 624 102 HOH HOH . E 5 HOH A 25 625 14 HOH HOH . E 5 HOH A 26 626 107 HOH HOH . E 5 HOH A 27 627 157 HOH HOH . E 5 HOH A 28 628 1 HOH HOH . E 5 HOH A 29 629 39 HOH HOH . E 5 HOH A 30 630 116 HOH HOH . E 5 HOH A 31 631 37 HOH HOH . E 5 HOH A 32 632 71 HOH HOH . E 5 HOH A 33 633 24 HOH HOH . E 5 HOH A 34 634 155 HOH HOH . E 5 HOH A 35 635 18 HOH HOH . E 5 HOH A 36 636 15 HOH HOH . E 5 HOH A 37 637 11 HOH HOH . E 5 HOH A 38 638 45 HOH HOH . E 5 HOH A 39 639 9 HOH HOH . E 5 HOH A 40 640 6 HOH HOH . E 5 HOH A 41 641 161 HOH HOH . E 5 HOH A 42 642 25 HOH HOH . E 5 HOH A 43 643 99 HOH HOH . E 5 HOH A 44 644 13 HOH HOH . E 5 HOH A 45 645 58 HOH HOH . E 5 HOH A 46 646 169 HOH HOH . E 5 HOH A 47 647 19 HOH HOH . E 5 HOH A 48 648 53 HOH HOH . E 5 HOH A 49 649 156 HOH HOH . E 5 HOH A 50 650 28 HOH HOH . E 5 HOH A 51 651 79 HOH HOH . E 5 HOH A 52 652 117 HOH HOH . E 5 HOH A 53 653 40 HOH HOH . E 5 HOH A 54 654 26 HOH HOH . E 5 HOH A 55 655 119 HOH HOH . E 5 HOH A 56 656 67 HOH HOH . E 5 HOH A 57 657 49 HOH HOH . E 5 HOH A 58 658 3 HOH HOH . E 5 HOH A 59 659 100 HOH HOH . E 5 HOH A 60 660 17 HOH HOH . E 5 HOH A 61 661 70 HOH HOH . E 5 HOH A 62 662 20 HOH HOH . E 5 HOH A 63 663 86 HOH HOH . E 5 HOH A 64 664 124 HOH HOH . E 5 HOH A 65 665 5 HOH HOH . E 5 HOH A 66 666 2 HOH HOH . E 5 HOH A 67 667 150 HOH HOH . E 5 HOH A 68 668 27 HOH HOH . E 5 HOH A 69 669 111 HOH HOH . E 5 HOH A 70 670 35 HOH HOH . E 5 HOH A 71 671 10 HOH HOH . E 5 HOH A 72 672 8 HOH HOH . E 5 HOH A 73 673 54 HOH HOH . E 5 HOH A 74 674 158 HOH HOH . E 5 HOH A 75 675 133 HOH HOH . E 5 HOH A 76 676 104 HOH HOH . E 5 HOH A 77 677 41 HOH HOH . E 5 HOH A 78 678 52 HOH HOH . E 5 HOH A 79 679 4 HOH HOH . E 5 HOH A 80 680 34 HOH HOH . E 5 HOH A 81 681 30 HOH HOH . E 5 HOH A 82 682 166 HOH HOH . E 5 HOH A 83 683 98 HOH HOH . E 5 HOH A 84 684 94 HOH HOH . E 5 HOH A 85 685 50 HOH HOH . E 5 HOH A 86 686 31 HOH HOH . E 5 HOH A 87 687 32 HOH HOH . E 5 HOH A 88 688 38 HOH HOH . E 5 HOH A 89 689 135 HOH HOH . E 5 HOH A 90 690 33 HOH HOH . E 5 HOH A 91 691 89 HOH HOH . E 5 HOH A 92 692 36 HOH HOH . E 5 HOH A 93 693 22 HOH HOH . E 5 HOH A 94 694 115 HOH HOH . E 5 HOH A 95 695 118 HOH HOH . E 5 HOH A 96 696 87 HOH HOH . E 5 HOH A 97 697 84 HOH HOH . E 5 HOH A 98 698 97 HOH HOH . E 5 HOH A 99 699 83 HOH HOH . E 5 HOH A 100 700 134 HOH HOH . E 5 HOH A 101 701 76 HOH HOH . E 5 HOH A 102 702 77 HOH HOH . E 5 HOH A 103 703 47 HOH HOH . E 5 HOH A 104 704 90 HOH HOH . E 5 HOH A 105 705 146 HOH HOH . E 5 HOH A 106 706 75 HOH HOH . E 5 HOH A 107 707 164 HOH HOH . E 5 HOH A 108 708 80 HOH HOH . E 5 HOH A 109 709 126 HOH HOH . E 5 HOH A 110 710 65 HOH HOH . E 5 HOH A 111 711 44 HOH HOH . E 5 HOH A 112 712 129 HOH HOH . E 5 HOH A 113 713 73 HOH HOH . E 5 HOH A 114 714 51 HOH HOH . E 5 HOH A 115 715 78 HOH HOH . E 5 HOH A 116 716 114 HOH HOH . E 5 HOH A 117 717 105 HOH HOH . E 5 HOH A 118 718 60 HOH HOH . E 5 HOH A 119 719 74 HOH HOH . E 5 HOH A 120 720 21 HOH HOH . E 5 HOH A 121 721 56 HOH HOH . E 5 HOH A 122 722 88 HOH HOH . E 5 HOH A 123 723 55 HOH HOH . E 5 HOH A 124 724 64 HOH HOH . E 5 HOH A 125 725 63 HOH HOH . E 5 HOH A 126 726 82 HOH HOH . E 5 HOH A 127 727 81 HOH HOH . E 5 HOH A 128 728 46 HOH HOH . E 5 HOH A 129 729 162 HOH HOH . E 5 HOH A 130 730 127 HOH HOH . E 5 HOH A 131 731 160 HOH HOH . E 5 HOH A 132 732 48 HOH HOH . E 5 HOH A 133 733 59 HOH HOH . E 5 HOH A 134 734 85 HOH HOH . E 5 HOH A 135 735 159 HOH HOH . E 5 HOH A 136 736 141 HOH HOH . E 5 HOH A 137 737 154 HOH HOH . E 5 HOH A 138 738 61 HOH HOH . E 5 HOH A 139 739 142 HOH HOH . E 5 HOH A 140 740 93 HOH HOH . E 5 HOH A 141 741 101 HOH HOH . E 5 HOH A 142 742 106 HOH HOH . E 5 HOH A 143 743 57 HOH HOH . E 5 HOH A 144 744 163 HOH HOH . E 5 HOH A 145 745 108 HOH HOH . E 5 HOH A 146 746 109 HOH HOH . E 5 HOH A 147 747 125 HOH HOH . E 5 HOH A 148 748 143 HOH HOH . E 5 HOH A 149 749 128 HOH HOH . F 5 HOH B 1 701 62 HOH HOH . F 5 HOH B 2 702 43 HOH HOH . F 5 HOH B 3 703 29 HOH HOH . F 5 HOH B 4 704 149 HOH HOH . F 5 HOH B 5 705 148 HOH HOH . F 5 HOH B 6 706 147 HOH HOH . F 5 HOH B 7 707 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 -38.623 25.57 -7.443 1 41.3 ? C ACT 501 A 1 HETATM 2 O O ACT . . . C 3 -39.502 26.206 -8.095 1 47.19 -1 O ACT 501 A 1 HETATM 3 O OXT ACT . . . C 3 -37.438 25.94 -7.222 1 47.03 ? OXT ACT 501 A 1 HETATM 4 C CH3 ACT . . . C 3 -39.011 24.206 -6.852 1 44.73 ? CH3 ACT 501 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #