data_9GYJ # _model_server_result.job_id wVbZveib7NgexFKbMPbkhg _model_server_result.datetime_utc '2024-12-16 01:30:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gyj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 9GYJ # _exptl.entry_id 9GYJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9GYJ _cell.length_a 65.745 _cell.length_b 65.745 _cell.length_c 262.744 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GYJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -32.8725 56.93684 -43.790667 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 75 n n C OXT ACT sing 76 n n C CH3 ACT sing 77 n n CH3 H1 ACT sing 78 n n CH3 H2 ACT sing 79 n n CH3 H3 ACT sing 80 n n # _atom_sites.entry_id 9GYJ _atom_sites.fract_transf_matrix[1][1] 0.01521 _atom_sites.fract_transf_matrix[1][2] 0.008782 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT A 1 501 502 ACT ACT . D 4 A1IQN A 1 502 1 A1IQN XXX . E 5 HOH A 1 601 113 HOH HOH . E 5 HOH A 2 602 121 HOH HOH . E 5 HOH A 3 603 28 HOH HOH . E 5 HOH A 4 604 123 HOH HOH . E 5 HOH A 5 605 8 HOH HOH . E 5 HOH A 6 606 103 HOH HOH . E 5 HOH A 7 607 124 HOH HOH . E 5 HOH A 8 608 63 HOH HOH . E 5 HOH A 9 609 75 HOH HOH . E 5 HOH A 10 610 114 HOH HOH . E 5 HOH A 11 611 110 HOH HOH . E 5 HOH A 12 612 20 HOH HOH . E 5 HOH A 13 613 77 HOH HOH . E 5 HOH A 14 614 12 HOH HOH . E 5 HOH A 15 615 100 HOH HOH . E 5 HOH A 16 616 80 HOH HOH . E 5 HOH A 17 617 118 HOH HOH . E 5 HOH A 18 618 9 HOH HOH . E 5 HOH A 19 619 93 HOH HOH . E 5 HOH A 20 620 7 HOH HOH . E 5 HOH A 21 621 66 HOH HOH . E 5 HOH A 22 622 101 HOH HOH . E 5 HOH A 23 623 33 HOH HOH . E 5 HOH A 24 624 29 HOH HOH . E 5 HOH A 25 625 106 HOH HOH . E 5 HOH A 26 626 127 HOH HOH . E 5 HOH A 27 627 3 HOH HOH . E 5 HOH A 28 628 2 HOH HOH . E 5 HOH A 29 629 105 HOH HOH . E 5 HOH A 30 630 14 HOH HOH . E 5 HOH A 31 631 32 HOH HOH . E 5 HOH A 32 632 10 HOH HOH . E 5 HOH A 33 633 107 HOH HOH . E 5 HOH A 34 634 13 HOH HOH . E 5 HOH A 35 635 81 HOH HOH . E 5 HOH A 36 636 18 HOH HOH . E 5 HOH A 37 637 4 HOH HOH . E 5 HOH A 38 638 59 HOH HOH . E 5 HOH A 39 639 82 HOH HOH . E 5 HOH A 40 640 64 HOH HOH . E 5 HOH A 41 641 58 HOH HOH . E 5 HOH A 42 642 31 HOH HOH . E 5 HOH A 43 643 23 HOH HOH . E 5 HOH A 44 644 98 HOH HOH . E 5 HOH A 45 645 35 HOH HOH . E 5 HOH A 46 646 56 HOH HOH . E 5 HOH A 47 647 19 HOH HOH . E 5 HOH A 48 648 91 HOH HOH . E 5 HOH A 49 649 97 HOH HOH . E 5 HOH A 50 650 27 HOH HOH . E 5 HOH A 51 651 74 HOH HOH . E 5 HOH A 52 652 5 HOH HOH . E 5 HOH A 53 653 30 HOH HOH . E 5 HOH A 54 654 90 HOH HOH . E 5 HOH A 55 655 15 HOH HOH . E 5 HOH A 56 656 17 HOH HOH . E 5 HOH A 57 657 73 HOH HOH . E 5 HOH A 58 658 38 HOH HOH . E 5 HOH A 59 659 21 HOH HOH . E 5 HOH A 60 660 71 HOH HOH . E 5 HOH A 61 661 11 HOH HOH . E 5 HOH A 62 662 6 HOH HOH . E 5 HOH A 63 663 54 HOH HOH . E 5 HOH A 64 664 55 HOH HOH . E 5 HOH A 65 665 62 HOH HOH . E 5 HOH A 66 666 69 HOH HOH . E 5 HOH A 67 667 41 HOH HOH . E 5 HOH A 68 668 40 HOH HOH . E 5 HOH A 69 669 52 HOH HOH . E 5 HOH A 70 670 16 HOH HOH . E 5 HOH A 71 671 129 HOH HOH . E 5 HOH A 72 672 68 HOH HOH . E 5 HOH A 73 673 92 HOH HOH . E 5 HOH A 74 674 37 HOH HOH . E 5 HOH A 75 675 96 HOH HOH . E 5 HOH A 76 676 60 HOH HOH . E 5 HOH A 77 677 24 HOH HOH . E 5 HOH A 78 678 102 HOH HOH . E 5 HOH A 79 679 67 HOH HOH . E 5 HOH A 80 680 99 HOH HOH . E 5 HOH A 81 681 130 HOH HOH . E 5 HOH A 82 682 26 HOH HOH . E 5 HOH A 83 683 34 HOH HOH . E 5 HOH A 84 684 128 HOH HOH . E 5 HOH A 85 685 116 HOH HOH . E 5 HOH A 86 686 48 HOH HOH . E 5 HOH A 87 687 47 HOH HOH . E 5 HOH A 88 688 44 HOH HOH . E 5 HOH A 89 689 76 HOH HOH . E 5 HOH A 90 690 65 HOH HOH . E 5 HOH A 91 691 42 HOH HOH . E 5 HOH A 92 692 57 HOH HOH . E 5 HOH A 93 693 43 HOH HOH . E 5 HOH A 94 694 50 HOH HOH . E 5 HOH A 95 695 53 HOH HOH . E 5 HOH A 96 696 72 HOH HOH . E 5 HOH A 97 697 61 HOH HOH . E 5 HOH A 98 698 39 HOH HOH . E 5 HOH A 99 699 84 HOH HOH . E 5 HOH A 100 700 51 HOH HOH . E 5 HOH A 101 701 126 HOH HOH . E 5 HOH A 102 702 111 HOH HOH . E 5 HOH A 103 703 104 HOH HOH . E 5 HOH A 104 704 25 HOH HOH . E 5 HOH A 105 705 119 HOH HOH . E 5 HOH A 106 706 115 HOH HOH . E 5 HOH A 107 707 83 HOH HOH . E 5 HOH A 108 708 79 HOH HOH . E 5 HOH A 109 709 70 HOH HOH . E 5 HOH A 110 710 45 HOH HOH . E 5 HOH A 111 711 95 HOH HOH . E 5 HOH A 112 712 112 HOH HOH . F 5 HOH B 1 701 36 HOH HOH . F 5 HOH B 2 702 22 HOH HOH . F 5 HOH B 3 703 49 HOH HOH . F 5 HOH B 4 704 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 -38.783 25.731 -7.557 1 43.31 ? C ACT 501 A 1 HETATM 2 O O ACT . . . C 3 -39.716 26.314 -8.173 1 45.23 -1 O ACT 501 A 1 HETATM 3 O OXT ACT . . . C 3 -37.612 26.145 -7.315 1 43 ? OXT ACT 501 A 1 HETATM 4 C CH3 ACT . . . C 3 -39.097 24.305 -7.006 1 42.26 ? CH3 ACT 501 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 596 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #