data_9GYK # _model_server_result.job_id b5Pd365gBvcLGaIILvoG2w _model_server_result.datetime_utc '2024-12-16 01:43:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gyk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 9GYK # _exptl.entry_id 9GYK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9GYK _cell.length_a 65.95 _cell.length_b 65.95 _cell.length_c 264.41 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GYK _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -32.975 57.114375 -44.068333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 68 n n C OXT ACT sing 69 n n C CH3 ACT sing 70 n n CH3 H1 ACT sing 71 n n CH3 H2 ACT sing 72 n n CH3 H3 ACT sing 73 n n # _atom_sites.entry_id 9GYK _atom_sites.fract_transf_matrix[1][1] 0.015163 _atom_sites.fract_transf_matrix[1][2] 0.008754 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT A 1 501 502 ACT ACT . D 4 A1IQO A 1 502 1 A1IQO XXX . E 5 HOH A 1 601 79 HOH HOH . E 5 HOH A 2 602 64 HOH HOH . E 5 HOH A 3 603 44 HOH HOH . E 5 HOH A 4 604 45 HOH HOH . E 5 HOH A 5 605 66 HOH HOH . E 5 HOH A 6 606 24 HOH HOH . E 5 HOH A 7 607 46 HOH HOH . E 5 HOH A 8 608 30 HOH HOH . E 5 HOH A 9 609 8 HOH HOH . E 5 HOH A 10 610 49 HOH HOH . E 5 HOH A 11 611 25 HOH HOH . E 5 HOH A 12 612 10 HOH HOH . E 5 HOH A 13 613 31 HOH HOH . E 5 HOH A 14 614 73 HOH HOH . E 5 HOH A 15 615 82 HOH HOH . E 5 HOH A 16 616 78 HOH HOH . E 5 HOH A 17 617 21 HOH HOH . E 5 HOH A 18 618 42 HOH HOH . E 5 HOH A 19 619 51 HOH HOH . E 5 HOH A 20 620 5 HOH HOH . E 5 HOH A 21 621 7 HOH HOH . E 5 HOH A 22 622 1 HOH HOH . E 5 HOH A 23 623 19 HOH HOH . E 5 HOH A 24 624 4 HOH HOH . E 5 HOH A 25 625 3 HOH HOH . E 5 HOH A 26 626 6 HOH HOH . E 5 HOH A 27 627 9 HOH HOH . E 5 HOH A 28 628 57 HOH HOH . E 5 HOH A 29 629 35 HOH HOH . E 5 HOH A 30 630 12 HOH HOH . E 5 HOH A 31 631 72 HOH HOH . E 5 HOH A 32 632 37 HOH HOH . E 5 HOH A 33 633 60 HOH HOH . E 5 HOH A 34 634 68 HOH HOH . E 5 HOH A 35 635 34 HOH HOH . E 5 HOH A 36 636 18 HOH HOH . E 5 HOH A 37 637 39 HOH HOH . E 5 HOH A 38 638 27 HOH HOH . E 5 HOH A 39 639 53 HOH HOH . E 5 HOH A 40 640 77 HOH HOH . E 5 HOH A 41 641 17 HOH HOH . E 5 HOH A 42 642 76 HOH HOH . E 5 HOH A 43 643 16 HOH HOH . E 5 HOH A 44 644 47 HOH HOH . E 5 HOH A 45 645 32 HOH HOH . E 5 HOH A 46 646 15 HOH HOH . E 5 HOH A 47 647 65 HOH HOH . E 5 HOH A 48 648 36 HOH HOH . E 5 HOH A 49 649 52 HOH HOH . E 5 HOH A 50 650 58 HOH HOH . E 5 HOH A 51 651 11 HOH HOH . E 5 HOH A 52 652 13 HOH HOH . E 5 HOH A 53 653 56 HOH HOH . E 5 HOH A 54 654 81 HOH HOH . E 5 HOH A 55 655 63 HOH HOH . E 5 HOH A 56 656 59 HOH HOH . E 5 HOH A 57 657 40 HOH HOH . E 5 HOH A 58 658 83 HOH HOH . E 5 HOH A 59 659 48 HOH HOH . E 5 HOH A 60 660 22 HOH HOH . E 5 HOH A 61 661 23 HOH HOH . E 5 HOH A 62 662 84 HOH HOH . E 5 HOH A 63 663 69 HOH HOH . E 5 HOH A 64 664 55 HOH HOH . E 5 HOH A 65 665 26 HOH HOH . E 5 HOH A 66 666 70 HOH HOH . E 5 HOH A 67 667 75 HOH HOH . E 5 HOH A 68 668 67 HOH HOH . E 5 HOH A 69 669 74 HOH HOH . F 5 HOH B 1 701 29 HOH HOH . F 5 HOH B 2 702 62 HOH HOH . F 5 HOH B 3 703 2 HOH HOH . F 5 HOH B 4 704 14 HOH HOH . F 5 HOH B 5 705 71 HOH HOH . F 5 HOH B 6 706 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 -38.448 25.891 -7.58 1 53.19 ? C ACT 501 A 1 HETATM 2 O O ACT . . . C 3 -39.178 26.644 -8.301 1 63.61 -1 O ACT 501 A 1 HETATM 3 O OXT ACT . . . C 3 -37.252 26.036 -7.262 1 58.11 ? OXT ACT 501 A 1 HETATM 4 C CH3 ACT . . . C 3 -39.091 24.607 -7.008 1 46.55 ? CH3 ACT 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #