data_9GYO # _model_server_result.job_id Emp3jpbsyNrvxmWXSfBCMg _model_server_result.datetime_utc '2024-10-16 10:29:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9gyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 9GYO # _exptl.entry_id 9GYO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 395.498 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(ethylamino)-6-[3-(4-propan-2-ylphenyl)propanoyl]-7,8-dihydro-5H-pyrido[4,3-d]pyrimidine-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9GYO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9GYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 45 N CYS 22 1_555 D SG CYS 119 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? disulf ? disulf2 D SG CYS 122 N CYS 99 1_555 D SG CYS 130 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? disulf ? disulf3 E SG CYS 225 R CYS 85 1_555 E SG CYS 295 R CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C22 H29 N5 O2' _chem_comp.formula_weight 395.498 _chem_comp.id FWX _chem_comp.mon_nstd_flag . _chem_comp.name 2-(ethylamino)-6-[3-(4-propan-2-ylphenyl)propanoyl]-7,8-dihydro-5H-pyrido[4,3-d]pyrimidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O13 C12 FWX doub 160 n n C12 C14 FWX sing 161 n n C12 N09 FWX sing 162 n n C14 C15 FWX sing 163 n n C15 C16 FWX sing 164 n n C10 N09 FWX sing 165 n n C10 C11 FWX sing 166 n n N09 C08 FWX sing 167 n n C16 C21 FWX doub 168 n y C16 C17 FWX sing 169 n y C21 C20 FWX sing 170 n y C11 C06 FWX sing 171 n n C17 C18 FWX doub 172 n y C08 C07 FWX sing 173 n n C20 C19 FWX doub 174 n y C06 C07 FWX doub 175 n y C06 N05 FWX sing 176 n y C18 C19 FWX sing 177 n y C07 C25 FWX sing 178 n y C19 C22 FWX sing 179 n n N05 C04 FWX doub 180 n y C24 C22 FWX sing 181 n n C22 C23 FWX sing 182 n n C25 C27 FWX sing 183 n n C25 N26 FWX doub 184 n y C04 N26 FWX sing 185 n y C04 N03 FWX sing 186 n n C27 N28 FWX sing 187 n n C27 O29 FWX doub 188 n n N03 C02 FWX sing 189 n n C02 C01 FWX sing 190 n n C21 H1 FWX sing 191 n n C18 H2 FWX sing 192 n n C17 H3 FWX sing 193 n n C14 H4 FWX sing 194 n n C14 H5 FWX sing 195 n n C01 H6 FWX sing 196 n n C01 H7 FWX sing 197 n n C01 H8 FWX sing 198 n n C02 H9 FWX sing 199 n n C02 H10 FWX sing 200 n n C08 H11 FWX sing 201 n n C08 H12 FWX sing 202 n n C10 H13 FWX sing 203 n n C10 H14 FWX sing 204 n n C11 H15 FWX sing 205 n n C11 H16 FWX sing 206 n n C15 H17 FWX sing 207 n n C15 H18 FWX sing 208 n n C20 H19 FWX sing 209 n n C22 H20 FWX sing 210 n n C23 H21 FWX sing 211 n n C23 H22 FWX sing 212 n n C23 H23 FWX sing 213 n n C24 H24 FWX sing 214 n n C24 H25 FWX sing 215 n n C24 H26 FWX sing 216 n n N03 H27 FWX sing 217 n n N28 H28 FWX sing 218 n n N28 H29 FWX sing 219 n n # _atom_sites.entry_id 9GYO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 FWX R 1 401 401 FWX FWX . G 7 CLR R 1 402 402 CLR CLR . H 7 CLR R 1 403 403 CLR CLR . I 7 CLR R 1 404 404 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 FWX . . . F 6 113.524 111.452 70.179 1 43.5 ? C19 FWX 401 R 1 HETATM 2 C C21 FWX . . . F 6 113.434 112.792 72.193 1 42.05 ? C21 FWX 401 R 1 HETATM 3 C C18 FWX . . . F 6 112.61 110.587 70.773 1 42.7 ? C18 FWX 401 R 1 HETATM 4 C C17 FWX . . . F 6 112.109 110.83 72.04 1 42.27 ? C17 FWX 401 R 1 HETATM 5 C C16 FWX . . . F 6 112.517 111.932 72.775 1 41.41 ? C16 FWX 401 R 1 HETATM 6 C C14 FWX . . . F 6 112.568 111.289 75.227 1 40.56 ? C14 FWX 401 R 1 HETATM 7 C C12 FWX . . . F 6 114.008 111.618 75.535 1 40.75 ? C12 FWX 401 R 1 HETATM 8 C C01 FWX . . . F 6 116.968 108.972 67.533 1 47.63 ? C01 FWX 401 R 1 HETATM 9 C C02 FWX . . . F 6 117.981 108.639 68.594 1 46.57 ? C02 FWX 401 R 1 HETATM 10 C C04 FWX . . . F 6 117.237 109.635 70.733 1 43.39 ? C04 FWX 401 R 1 HETATM 11 C C06 FWX . . . F 6 116.688 110.57 72.77 1 40.51 ? C06 FWX 401 R 1 HETATM 12 C C07 FWX . . . F 6 115.673 109.621 72.929 1 40.7 ? C07 FWX 401 R 1 HETATM 13 C C08 FWX . . . F 6 114.815 109.636 74.167 1 40.09 ? C08 FWX 401 R 1 HETATM 14 C C10 FWX . . . F 6 116.395 111.251 75.145 1 39.78 ? C10 FWX 401 R 1 HETATM 15 C C11 FWX . . . F 6 116.975 111.628 73.8 1 40.11 ? C11 FWX 401 R 1 HETATM 16 C C15 FWX . . . F 6 111.969 112.192 74.157 1 39.92 ? C15 FWX 401 R 1 HETATM 17 C C20 FWX . . . F 6 113.934 112.556 70.923 1 42.53 ? C20 FWX 401 R 1 HETATM 18 C C22 FWX . . . F 6 114.078 111.174 68.786 1 45.99 ? C22 FWX 401 R 1 HETATM 19 C C23 FWX . . . F 6 113.032 110.595 67.837 1 47.62 ? C23 FWX 401 R 1 HETATM 20 C C24 FWX . . . F 6 114.716 112.399 68.135 1 47.09 ? C24 FWX 401 R 1 HETATM 21 C C25 FWX . . . F 6 115.49 108.66 71.906 1 41.31 ? C25 FWX 401 R 1 HETATM 22 C C27 FWX . . . F 6 114.447 107.576 71.934 1 41.09 ? C27 FWX 401 R 1 HETATM 23 N N03 FWX . . . F 6 118.017 109.648 69.64 1 45.91 ? N03 FWX 401 R 1 HETATM 24 N N05 FWX . . . F 6 117.462 110.58 71.667 1 41.84 ? N05 FWX 401 R 1 HETATM 25 N N09 FWX . . . F 6 114.994 110.869 74.97 1 40.09 ? N09 FWX 401 R 1 HETATM 26 N N26 FWX . . . F 6 116.276 108.686 70.818 1 42.21 ? N26 FWX 401 R 1 HETATM 27 N N28 FWX . . . F 6 114.453 106.726 70.916 1 41.2 ? N28 FWX 401 R 1 HETATM 28 O O13 FWX . . . F 6 114.272 112.568 76.264 1 41.37 ? O13 FWX 401 R 1 HETATM 29 O O29 FWX . . . F 6 113.635 107.491 72.851 1 40.56 ? O29 FWX 401 R 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #