data_9H2B # _model_server_result.job_id k0GQ9zhw_ahvA2_1Kbj3ag _model_server_result.datetime_utc '2025-07-04 04:42:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9h2b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":401}' # _entry.id 9H2B # _exptl.entry_id 9H2B _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9H2B _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9H2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 196-meric 196 'complete point assembly' 1 ? tetradecameric 14 'point asymmetric unit' 2 ? tetradecameric 14 'point asymmetric unit, std point frame' 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 1 1,2,3,4,5,6,7,8,9,10,11,12,13,14 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 3 P # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.810893 0.585194 0 -0.585194 0.810893 0 0 0 1 -471.17951 -76.17329 -338.1764 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.900969 -0.433884 0 0.433884 0.900969 0 0 0 1 179.85877 -113.01275 0 3 'point symmetry operation' ? ? 0.62349 -0.781831 0 0.781831 0.62349 0 0 0 1 390.94032 -136.79593 0 4 'point symmetry operation' ? ? 0.222521 -0.974928 0 0.974928 0.222521 0 0 0 1 591.43735 -66.63899 0 5 'point symmetry operation' ? ? -0.222521 -0.974928 0 0.974928 -0.222521 0 0 0 1 741.63898 83.56264 0 6 'point symmetry operation' ? ? -0.62349 -0.781831 0 0.781831 -0.62349 0 0 0 1 811.79593 284.05968 0 7 'point symmetry operation' ? ? -0.900969 -0.433884 0 0.433884 -0.900969 0 0 0 1 788.01275 495.14123 0 8 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 675 675 0 9 'point symmetry operation' ? ? -0.900969 0.433884 0 -0.433884 -0.900969 0 0 0 1 495.14123 788.01275 0 10 'point symmetry operation' ? ? -0.62349 0.781831 0 -0.781831 -0.62349 0 0 0 1 284.05968 811.79593 0 11 'point symmetry operation' ? ? -0.222521 0.974928 0 -0.974928 -0.222521 0 0 0 1 83.56265 741.63898 0 12 'point symmetry operation' ? ? 0.222521 0.974928 0 -0.974928 0.222521 0 0 0 1 -66.63898 591.43735 0 13 'point symmetry operation' ? ? 0.62349 0.781831 0 -0.781831 0.62349 0 0 0 1 -136.79593 390.94032 0 14 'point symmetry operation' ? ? 0.900969 0.433884 0 -0.433884 0.900969 0 0 0 1 -113.01275 179.85877 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 O N N ? 8 P N N ? 8 Q N N ? 8 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 H SG CYS 169 H CYS 169 1_555 L SG CYS 187 L CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 I SG CYS 514 I CYS 514 1_555 I SG CYS 620 I CYS 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 J SG CYS 512 J CYS 512 1_555 J SG CYS 514 J CYS 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 L SG CYS 128 L CYS 128 1_555 L SG CYS 250 L CYS 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 G SG CYS 18 G CYS 18 1_555 O ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc2 G SG CYS 36 G CYS 36 1_555 O ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc3 G SG CYS 49 G CYS 49 1_555 O ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc4 G NE2 HIS 52 G HIS 52 1_555 O ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc5 H SG CYS 18 H CYS 18 1_555 P ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc6 H SG CYS 36 H CYS 36 1_555 P ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc7 H SG CYS 49 H CYS 49 1_555 P ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc8 H NE2 HIS 52 H HIS 52 1_555 P ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc9 M SG CYS 18 M CYS 18 1_555 Q ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc10 M SG CYS 36 M CYS 36 1_555 Q ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc11 M SG CYS 49 M CYS 49 1_555 Q ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc12 M NE2 HIS 52 M HIS 52 1_555 Q ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc13 N SG CYS 18 N CYS 18 1_555 R ZN ZN . N ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc14 N SG CYS 36 N CYS 36 1_555 R ZN ZN . N ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc15 N SG CYS 49 N CYS 49 1_555 R ZN ZN . N ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc16 N NE2 HIS 52 N HIS 52 1_555 R ZN ZN . N ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9H2B _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 8 ZN G 1 401 350 ZN ZN . P 8 ZN H 1 401 350 ZN ZN . Q 8 ZN M 1 401 350 ZN ZN . R 8 ZN N 1 401 350 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 8 _atom_site.Cartn_x 467.97 _atom_site.Cartn_y 439.784 _atom_site.Cartn_z 337.145 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 277.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #