data_9H7B # _model_server_result.job_id OQa6Cv2d8GOlrYkHkhRgHA _model_server_result.datetime_utc '2025-08-03 11:32:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9h7b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 9H7B # _exptl.entry_id 9H7B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 198.217 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'biphenyl-4-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9H7B _cell.length_a 83.486 _cell.length_b 41.105 _cell.length_c 62.775 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9H7B _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -41.105 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 66 A GLU 66 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc2 A O ASP 99 A ASP 99 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 A OD1 ASP 99 A ASP 99 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc4 C CA CA . A CA 201 1_555 F O HOH . A HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc5 C CA CA . A CA 201 1_555 F O HOH . A HOH 348 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? # _chem_comp.formula 'C13 H10 O2' _chem_comp.formula_weight 198.217 _chem_comp.id Z7Z _chem_comp.mon_nstd_flag . _chem_comp.name 'biphenyl-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 Z7Z sing 357 n n O1 H1O Z7Z sing 358 n n C1 O2 Z7Z doub 359 n n C1 C2 Z7Z sing 360 n n C2 C3 Z7Z doub 361 n y C2 C5 Z7Z sing 362 n y C3 C4 Z7Z sing 363 n y C3 H31 Z7Z sing 364 n n C4 C7 Z7Z doub 365 n y C4 H41 Z7Z sing 366 n n C5 C6 Z7Z doub 367 n y C5 H51 Z7Z sing 368 n n C6 C7 Z7Z sing 369 n y C6 H61 Z7Z sing 370 n n C7 C8 Z7Z sing 371 n n C8 C9 Z7Z doub 372 n y C8 C10 Z7Z sing 373 n y C9 C11 Z7Z sing 374 n y C9 H91 Z7Z sing 375 n n C10 C12 Z7Z doub 376 n y C10 H101 Z7Z sing 377 n n C11 C13 Z7Z doub 378 n y C11 H111 Z7Z sing 379 n n C12 C13 Z7Z sing 380 n y C12 H121 Z7Z sing 381 n n C13 H131 Z7Z sing 382 n n # _atom_sites.entry_id 9H7B _atom_sites.fract_transf_matrix[1][1] 0.011978 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024328 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 201 1 CA CA . D 3 Z7Z A 1 202 1 Z7Z A28 . E 3 Z7Z B 1 201 1 Z7Z A28 . F 4 HOH A 1 301 19 HOH HOH . F 4 HOH A 2 302 46 HOH HOH . F 4 HOH A 3 303 40 HOH HOH . F 4 HOH A 4 304 20 HOH HOH . F 4 HOH A 5 305 22 HOH HOH . F 4 HOH A 6 306 57 HOH HOH . F 4 HOH A 7 307 13 HOH HOH . F 4 HOH A 8 308 23 HOH HOH . F 4 HOH A 9 309 6 HOH HOH . F 4 HOH A 10 310 15 HOH HOH . F 4 HOH A 11 311 10 HOH HOH . F 4 HOH A 12 312 3 HOH HOH . F 4 HOH A 13 313 70 HOH HOH . F 4 HOH A 14 314 35 HOH HOH . F 4 HOH A 15 315 39 HOH HOH . F 4 HOH A 16 316 24 HOH HOH . F 4 HOH A 17 317 12 HOH HOH . F 4 HOH A 18 318 36 HOH HOH . F 4 HOH A 19 319 52 HOH HOH . F 4 HOH A 20 320 7 HOH HOH . F 4 HOH A 21 321 8 HOH HOH . F 4 HOH A 22 322 58 HOH HOH . F 4 HOH A 23 323 11 HOH HOH . F 4 HOH A 24 324 61 HOH HOH . F 4 HOH A 25 325 60 HOH HOH . F 4 HOH A 26 326 56 HOH HOH . F 4 HOH A 27 327 38 HOH HOH . F 4 HOH A 28 328 50 HOH HOH . F 4 HOH A 29 329 53 HOH HOH . F 4 HOH A 30 330 4 HOH HOH . F 4 HOH A 31 331 55 HOH HOH . F 4 HOH A 32 332 33 HOH HOH . F 4 HOH A 33 333 29 HOH HOH . F 4 HOH A 34 334 59 HOH HOH . F 4 HOH A 35 335 69 HOH HOH . F 4 HOH A 36 336 30 HOH HOH . F 4 HOH A 37 337 17 HOH HOH . F 4 HOH A 38 338 18 HOH HOH . F 4 HOH A 39 339 63 HOH HOH . F 4 HOH A 40 340 44 HOH HOH . F 4 HOH A 41 341 54 HOH HOH . F 4 HOH A 42 342 62 HOH HOH . F 4 HOH A 43 343 68 HOH HOH . F 4 HOH A 44 344 42 HOH HOH . F 4 HOH A 45 345 67 HOH HOH . F 4 HOH A 46 346 43 HOH HOH . F 4 HOH A 47 347 27 HOH HOH . F 4 HOH A 48 348 72 HOH HOH . F 4 HOH A 49 349 26 HOH HOH . F 4 HOH A 50 350 41 HOH HOH . G 4 HOH B 1 301 65 HOH HOH . G 4 HOH B 2 302 32 HOH HOH . G 4 HOH B 3 303 28 HOH HOH . G 4 HOH B 4 304 21 HOH HOH . G 4 HOH B 5 305 14 HOH HOH . G 4 HOH B 6 306 1 HOH HOH . G 4 HOH B 7 307 45 HOH HOH . G 4 HOH B 8 308 49 HOH HOH . G 4 HOH B 9 309 9 HOH HOH . G 4 HOH B 10 310 31 HOH HOH . G 4 HOH B 11 311 16 HOH HOH . G 4 HOH B 12 312 2 HOH HOH . G 4 HOH B 13 313 37 HOH HOH . G 4 HOH B 14 314 34 HOH HOH . G 4 HOH B 15 315 48 HOH HOH . G 4 HOH B 16 316 5 HOH HOH . G 4 HOH B 17 317 73 HOH HOH . G 4 HOH B 18 318 25 HOH HOH . G 4 HOH B 19 319 64 HOH HOH . G 4 HOH B 20 320 51 HOH HOH . G 4 HOH B 21 321 47 HOH HOH . G 4 HOH B 22 322 66 HOH HOH . G 4 HOH B 23 323 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 Z7Z . . . D 3 0.192 -18.955 1.65 0.5 62.07 ? O1 Z7Z 202 A 1 HETATM 2 C C1 Z7Z . . . D 3 0.031 -20.158 2.201 0.5 34.24 ? C1 Z7Z 202 A 1 HETATM 3 O O2 Z7Z . . . D 3 -0.074 -21.113 1.48 0.5 34.84 ? O2 Z7Z 202 A 1 HETATM 4 C C2 Z7Z . . . D 3 -0.01 -20.296 3.71 0.5 35.5 ? C2 Z7Z 202 A 1 HETATM 5 C C3 Z7Z . . . D 3 0.963 -19.634 4.455 0.5 36.07 ? C3 Z7Z 202 A 1 HETATM 6 C C4 Z7Z . . . D 3 0.956 -19.73 5.844 0.5 32.71 ? C4 Z7Z 202 A 1 HETATM 7 C C5 Z7Z . . . D 3 -0.987 -21.059 4.365 0.5 38.48 ? C5 Z7Z 202 A 1 HETATM 8 C C6 Z7Z . . . D 3 -0.989 -21.146 5.761 0.5 30.94 ? C6 Z7Z 202 A 1 HETATM 9 C C7 Z7Z . . . D 3 -0.008 -20.491 6.506 0.5 31.09 ? C7 Z7Z 202 A 1 HETATM 10 C C8 Z7Z . . . D 3 0.013 -20.548 8.004 0.5 22.75 ? C8 Z7Z 202 A 1 HETATM 11 C C9 Z7Z . . . D 3 1.187 -20.821 8.704 0.5 24.5 ? C9 Z7Z 202 A 1 HETATM 12 C C10 Z7Z . . . D 3 -1.16 -20.281 8.707 0.5 24.29 ? C10 Z7Z 202 A 1 HETATM 13 C C11 Z7Z . . . D 3 1.174 -20.859 10.092 0.5 21.72 ? C11 Z7Z 202 A 1 HETATM 14 C C12 Z7Z . . . D 3 -1.163 -20.289 10.093 0.5 22.4 ? C12 Z7Z 202 A 1 HETATM 15 C C13 Z7Z . . . D 3 0.002 -20.587 10.793 0.5 27.09 ? C13 Z7Z 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #