data_9HAE # _model_server_result.job_id DXTAEmd5e4ymhsDFJSsE_A _model_server_result.datetime_utc '2025-09-04 01:34:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9hae # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 9HAE # _exptl.entry_id 9HAE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.024 _cell.angle_gamma 90 _cell.entry_id 9HAE _cell.length_a 55.71 _cell.length_b 90.25 _cell.length_c 63.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HAE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,H,I 1 1 C,D,F,G,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 42 A VAL 34 1_555 E NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc2 A OD1 ASP 44 A ASP 36 1_555 E NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc3 H O HOH . A HOH 311 2_646 G NA NA . C NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc4 C O VAL 42 C VAL 34 1_555 F NA NA . C NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc5 C OD1 ASP 44 C ASP 36 1_555 F NA NA . C NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc6 C O ASN 142 C ASN 134 1_555 G NA NA . C NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc7 C OG1 THR 144 C THR 136 1_555 G NA NA . C NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9HAE _atom_sites.fract_transf_matrix[1][1] 0.01795 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000948 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA A 1 201 1 NA NA . F 3 NA C 1 201 2 NA NA . G 3 NA C 1 202 3 NA NA . H 4 HOH A 1 301 135 HOH HOH . H 4 HOH A 2 302 127 HOH HOH . H 4 HOH A 3 303 122 HOH HOH . H 4 HOH A 4 304 17 HOH HOH . H 4 HOH A 5 305 14 HOH HOH . H 4 HOH A 6 306 124 HOH HOH . H 4 HOH A 7 307 67 HOH HOH . H 4 HOH A 8 308 57 HOH HOH . H 4 HOH A 9 309 42 HOH HOH . H 4 HOH A 10 310 88 HOH HOH . H 4 HOH A 11 311 134 HOH HOH . H 4 HOH A 12 312 29 HOH HOH . H 4 HOH A 13 313 119 HOH HOH . H 4 HOH A 14 314 89 HOH HOH . H 4 HOH A 15 315 96 HOH HOH . H 4 HOH A 16 316 12 HOH HOH . H 4 HOH A 17 317 46 HOH HOH . H 4 HOH A 18 318 30 HOH HOH . H 4 HOH A 19 319 7 HOH HOH . H 4 HOH A 20 320 23 HOH HOH . H 4 HOH A 21 321 15 HOH HOH . H 4 HOH A 22 322 33 HOH HOH . H 4 HOH A 23 323 129 HOH HOH . H 4 HOH A 24 324 117 HOH HOH . H 4 HOH A 25 325 63 HOH HOH . H 4 HOH A 26 326 86 HOH HOH . H 4 HOH A 27 327 91 HOH HOH . H 4 HOH A 28 328 62 HOH HOH . H 4 HOH A 29 329 4 HOH HOH . H 4 HOH A 30 330 102 HOH HOH . H 4 HOH A 31 331 101 HOH HOH . H 4 HOH A 32 332 11 HOH HOH . H 4 HOH A 33 333 1 HOH HOH . H 4 HOH A 34 334 99 HOH HOH . H 4 HOH A 35 335 8 HOH HOH . H 4 HOH A 36 336 47 HOH HOH . H 4 HOH A 37 337 98 HOH HOH . H 4 HOH A 38 338 18 HOH HOH . H 4 HOH A 39 339 106 HOH HOH . H 4 HOH A 40 340 3 HOH HOH . H 4 HOH A 41 341 92 HOH HOH . H 4 HOH A 42 342 72 HOH HOH . H 4 HOH A 43 343 59 HOH HOH . H 4 HOH A 44 344 81 HOH HOH . H 4 HOH A 45 345 97 HOH HOH . H 4 HOH A 46 346 85 HOH HOH . H 4 HOH A 47 347 28 HOH HOH . H 4 HOH A 48 348 65 HOH HOH . H 4 HOH A 49 349 2 HOH HOH . H 4 HOH A 50 350 121 HOH HOH . H 4 HOH A 51 351 71 HOH HOH . H 4 HOH A 52 352 120 HOH HOH . H 4 HOH A 53 353 126 HOH HOH . H 4 HOH A 54 354 40 HOH HOH . H 4 HOH A 55 355 105 HOH HOH . H 4 HOH A 56 356 118 HOH HOH . H 4 HOH A 57 357 104 HOH HOH . H 4 HOH A 58 358 128 HOH HOH . H 4 HOH A 59 359 70 HOH HOH . H 4 HOH A 60 360 100 HOH HOH . H 4 HOH A 61 361 53 HOH HOH . H 4 HOH A 62 362 115 HOH HOH . I 4 HOH B 1 101 130 HOH HOH . I 4 HOH B 2 102 52 HOH HOH . I 4 HOH B 3 103 90 HOH HOH . I 4 HOH B 4 104 37 HOH HOH . I 4 HOH B 5 105 55 HOH HOH . I 4 HOH B 6 106 114 HOH HOH . J 4 HOH C 1 301 56 HOH HOH . J 4 HOH C 2 302 49 HOH HOH . J 4 HOH C 3 303 79 HOH HOH . J 4 HOH C 4 304 61 HOH HOH . J 4 HOH C 5 305 43 HOH HOH . J 4 HOH C 6 306 75 HOH HOH . J 4 HOH C 7 307 20 HOH HOH . J 4 HOH C 8 308 36 HOH HOH . J 4 HOH C 9 309 16 HOH HOH . J 4 HOH C 10 310 10 HOH HOH . J 4 HOH C 11 311 60 HOH HOH . J 4 HOH C 12 312 22 HOH HOH . J 4 HOH C 13 313 77 HOH HOH . J 4 HOH C 14 314 5 HOH HOH . J 4 HOH C 15 315 27 HOH HOH . J 4 HOH C 16 316 64 HOH HOH . J 4 HOH C 17 317 35 HOH HOH . J 4 HOH C 18 318 80 HOH HOH . J 4 HOH C 19 319 9 HOH HOH . J 4 HOH C 20 320 87 HOH HOH . J 4 HOH C 21 321 6 HOH HOH . J 4 HOH C 22 322 84 HOH HOH . J 4 HOH C 23 323 73 HOH HOH . J 4 HOH C 24 324 25 HOH HOH . J 4 HOH C 25 325 39 HOH HOH . J 4 HOH C 26 326 21 HOH HOH . J 4 HOH C 27 327 32 HOH HOH . J 4 HOH C 28 328 66 HOH HOH . J 4 HOH C 29 329 116 HOH HOH . J 4 HOH C 30 330 74 HOH HOH . J 4 HOH C 31 331 112 HOH HOH . J 4 HOH C 32 332 26 HOH HOH . J 4 HOH C 33 333 44 HOH HOH . J 4 HOH C 34 334 133 HOH HOH . J 4 HOH C 35 335 76 HOH HOH . J 4 HOH C 36 336 41 HOH HOH . J 4 HOH C 37 337 51 HOH HOH . J 4 HOH C 38 338 31 HOH HOH . J 4 HOH C 39 339 19 HOH HOH . J 4 HOH C 40 340 34 HOH HOH . J 4 HOH C 41 341 131 HOH HOH . J 4 HOH C 42 342 45 HOH HOH . J 4 HOH C 43 343 50 HOH HOH . J 4 HOH C 44 344 93 HOH HOH . J 4 HOH C 45 345 69 HOH HOH . J 4 HOH C 46 346 107 HOH HOH . J 4 HOH C 47 347 83 HOH HOH . J 4 HOH C 48 348 109 HOH HOH . J 4 HOH C 49 349 103 HOH HOH . J 4 HOH C 50 350 125 HOH HOH . J 4 HOH C 51 351 54 HOH HOH . J 4 HOH C 52 352 13 HOH HOH . J 4 HOH C 53 353 132 HOH HOH . J 4 HOH C 54 354 111 HOH HOH . J 4 HOH C 55 355 78 HOH HOH . J 4 HOH C 56 356 108 HOH HOH . J 4 HOH C 57 357 94 HOH HOH . J 4 HOH C 58 358 48 HOH HOH . J 4 HOH C 59 359 110 HOH HOH . J 4 HOH C 60 360 82 HOH HOH . K 4 HOH D 1 101 24 HOH HOH . K 4 HOH D 2 102 38 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 46.024 _atom_site.Cartn_y -16.359 _atom_site.Cartn_z 29.944 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 145 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #