data_9HAP
#
_model_server_result.job_id            kD3SL4fbALjIucdbkReTWQ 
_model_server_result.datetime_utc      '2025-07-05 03:49:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9hap 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":701}' 
#
_entry.id    9HAP 
#
_exptl.entry_id    9HAP 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              448.941 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (R)-Tolvaptan 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9HAP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9HAP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 25 H CYS 25 1_555 A SG CYS 99 H CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 154 H CYS 154 1_555 A SG CYS 210 H CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 B SG CYS 28 K CYS 22 1_555 B SG CYS 102 K CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 C SG CYS 23 L CYS 24 1_555 C SG CYS 88 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 C SG CYS 135 L CYS 136 1_555 C SG CYS 195 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 D SG CYS 176 R CYS 112 1_555 D SG CYS 256 R CYS 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C26 H25 Cl N2 O3' 
_chem_comp.formula_weight    448.941 
_chem_comp.id                A1IT8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (R)-Tolvaptan 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O03 C13 A1IT8 doub 1 n n 
C28 C31 A1IT8 doub 2 n y 
C28 C26 A1IT8 sing 3 n y 
C31 C32 A1IT8 sing 4 n y 
C20 C23 A1IT8 doub 5 n y 
C20 C16 A1IT8 sing 6 n y 
C13 C16 A1IT8 sing 7 n n 
C13 N05 A1IT8 sing 8 n n 
C23 C22 A1IT8 sing 9 n y 
C16 C19 A1IT8 doub 10 n y 
C22 N06 A1IT8 sing 11 n n 
C22 C21 A1IT8 doub 12 n y 
C19 C21 A1IT8 sing 13 n y 
C19 C24 A1IT8 sing 14 n n 
N06 C25 A1IT8 sing 15 n n 
C25 O04 A1IT8 doub 16 n n 
C25 C26 A1IT8 sing 17 n n 
C26 C27 A1IT8 doub 18 n y 
C32 C29 A1IT8 doub 19 n y 
N05 C10 A1IT8 sing 20 n n 
N05 C12 A1IT8 sing 21 n n 
C10 C08 A1IT8 sing 22 n n 
C07 C08 A1IT8 sing 23 n n 
C07 C09 A1IT8 sing 24 n n 
C09 C11 A1IT8 sing 25 n n 
C09 O02 A1IT8 sing 26 n n 
C27 C29 A1IT8 sing 27 n y 
C27 C30 A1IT8 sing 28 n n 
C12 C11 A1IT8 doub 29 n y 
C12 C15 A1IT8 sing 30 n y 
C11 C14 A1IT8 sing 31 n y 
C15 C18 A1IT8 doub 32 n y 
C14 C17 A1IT8 doub 33 n y 
C18 C17 A1IT8 sing 34 n y 
C17 CL01 A1IT8 sing 35 n n 
C10 H1 A1IT8 sing 36 n n 
C10 H2 A1IT8 sing 37 n n 
C14 H3 A1IT8 sing 38 n n 
C15 H4 A1IT8 sing 39 n n 
C07 H5 A1IT8 sing 40 n n 
C07 H6 A1IT8 sing 41 n n 
C08 H7 A1IT8 sing 42 n n 
C08 H8 A1IT8 sing 43 n n 
C09 H9 A1IT8 sing 44 n n 
C18 H10 A1IT8 sing 45 n n 
C20 H11 A1IT8 sing 46 n n 
C21 H12 A1IT8 sing 47 n n 
C23 H13 A1IT8 sing 48 n n 
C24 H14 A1IT8 sing 49 n n 
C24 H15 A1IT8 sing 50 n n 
C24 H16 A1IT8 sing 51 n n 
C28 H17 A1IT8 sing 52 n n 
C29 H18 A1IT8 sing 53 n n 
C30 H19 A1IT8 sing 54 n n 
C30 H20 A1IT8 sing 55 n n 
C30 H21 A1IT8 sing 56 n n 
C31 H22 A1IT8 sing 57 n n 
C32 H23 A1IT8 sing 58 n n 
N06 H24 A1IT8 sing 59 n n 
O02 H25 A1IT8 sing 60 n n 
#
_atom_sites.entry_id                     9HAP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          E 
_pdbx_nonpoly_scheme.entity_id        5 
_pdbx_nonpoly_scheme.mon_id           A1IT8 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      701 
_pdbx_nonpoly_scheme.auth_seq_num     701 
_pdbx_nonpoly_scheme.pdb_mon_id       A1IT8 
_pdbx_nonpoly_scheme.auth_mon_id      TVP 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 A1IT8 . . . E 5 146.978 163.846 108.222 1 79.95 ? C10 A1IT8 701 R 1 
HETATM 2 C C11 A1IT8 . . . E 5 149.366 165.322 109.71 1 76.22 ? C11 A1IT8 701 R 1 
HETATM 3 C C12 A1IT8 . . . E 5 149.178 163.983 109.346 1 76.61 ? C12 A1IT8 701 R 1 
HETATM 4 C C13 A1IT8 . . . E 5 149.002 163.237 107.003 1 79.07 ? C13 A1IT8 701 R 1 
HETATM 5 C C14 A1IT8 . . . E 5 150.115 165.612 110.847 1 76.74 ? C14 A1IT8 701 R 1 
HETATM 6 C C15 A1IT8 . . . E 5 149.727 162.96 110.114 1 81.91 ? C15 A1IT8 701 R 1 
HETATM 7 C C16 A1IT8 . . . E 5 150.165 162.292 107.093 1 81.13 ? C16 A1IT8 701 R 1 
HETATM 8 C C07 A1IT8 . . . E 5 147.339 166.379 108.489 1 82.4 ? C07 A1IT8 701 R 1 
HETATM 9 C C08 A1IT8 . . . E 5 146.576 165.128 108.926 1 78.2 ? C08 A1IT8 701 R 1 
HETATM 10 C C09 A1IT8 . . . E 5 148.788 166.462 108.963 1 77.77 ? C09 A1IT8 701 R 1 
HETATM 11 C C17 A1IT8 . . . E 5 150.651 164.582 111.593 1 79.96 ? C17 A1IT8 701 R 1 
HETATM 12 C C18 A1IT8 . . . E 5 150.468 163.264 111.243 1 82.25 ? C18 A1IT8 701 R 1 
HETATM 13 C C19 A1IT8 . . . E 5 149.962 160.937 107.397 1 78.48 ? C19 A1IT8 701 R 1 
HETATM 14 C C20 A1IT8 . . . E 5 151.46 162.787 106.934 1 81.91 ? C20 A1IT8 701 R 1 
HETATM 15 C C21 A1IT8 . . . E 5 151.075 160.117 107.54 1 73.25 ? C21 A1IT8 701 R 1 
HETATM 16 C C22 A1IT8 . . . E 5 152.366 160.612 107.384 1 70.91 ? C22 A1IT8 701 R 1 
HETATM 17 C C23 A1IT8 . . . E 5 152.551 161.953 107.08 1 76.03 ? C23 A1IT8 701 R 1 
HETATM 18 C C24 A1IT8 . . . E 5 148.588 160.336 107.55 1 76.08 ? C24 A1IT8 701 R 1 
HETATM 19 C C25 A1IT8 . . . E 5 154.759 160.002 107.72 1 72.05 ? C25 A1IT8 701 R 1 
HETATM 20 C C26 A1IT8 . . . E 5 155.655 158.813 107.863 1 69.4 ? C26 A1IT8 701 R 1 
HETATM 21 C C27 A1IT8 . . . E 5 156.096 158.4 109.13 1 68.44 ? C27 A1IT8 701 R 1 
HETATM 22 C C28 A1IT8 . . . E 5 156.021 158.099 106.72 1 67.51 ? C28 A1IT8 701 R 1 
HETATM 23 C C29 A1IT8 . . . E 5 156.91 157.271 109.202 1 65.66 ? C29 A1IT8 701 R 1 
HETATM 24 C C30 A1IT8 . . . E 5 155.612 159.055 110.398 1 67.15 ? C30 A1IT8 701 R 1 
HETATM 25 C C31 A1IT8 . . . E 5 156.827 156.978 106.831 1 66.54 ? C31 A1IT8 701 R 1 
HETATM 26 C C32 A1IT8 . . . E 5 157.269 156.566 108.068 1 64.43 ? C32 A1IT8 701 R 1 
HETATM 27 N N05 A1IT8 . . . E 5 148.435 163.655 108.17 1 76.59 ? N05 A1IT8 701 R 1 
HETATM 28 N N06 A1IT8 . . . E 5 153.447 159.714 107.537 1 71.67 ? N06 A1IT8 701 R 1 
HETATM 29 O O02 A1IT8 . . . E 5 148.84 167.608 109.808 1 77.53 ? O02 A1IT8 701 R 1 
HETATM 30 O O03 A1IT8 . . . E 5 148.595 163.613 105.921 1 81.21 ? O03 A1IT8 701 R 1 
HETATM 31 O O04 A1IT8 . . . E 5 155.209 161.143 107.777 1 74.46 ? O04 A1IT8 701 R 1 
HETATM 32 CL CL01 A1IT8 . . . E 5 151.594 164.966 113.005 1 86.04 ? CL01 A1IT8 701 R 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           32 
#