data_9HB8
#
_model_server_result.job_id            YPZRPoDNkKOPayEQLErMBg 
_model_server_result.datetime_utc      '2025-07-21 16:40:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9hb8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    9HB8 
#
_exptl.entry_id    9HB8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              500.575 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-ethyl-8-[(2-methylimidazo[2,1-b][1,3]thiazol-6-yl)methyl]-7-[[4-(1-methylpyrazol-3-yl)phenyl]methyl]purine-2,6-dione 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9HB8 
_cell.length_a            100.507 
_cell.length_b            94.11 
_cell.length_c            87.922 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9HB8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 201.014 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 200 A HIS 318 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc2 A NE2 HIS 205 A HIS 323 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc3 A OE1 GLU 245 A GLU 363 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc4 A OE2 GLU 245 A GLU 363 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc5 C FE FE . A FE 501 1_555 D NAQ UVU . A UVU 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc6 C FE FE . A FE 501 1_555 G O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? 
metalc ? metalc7 B NE2 HIS 200 B HIS 318 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
metalc ? metalc8 B NE2 HIS 205 B HIS 323 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc9 B OE1 GLU 245 B GLU 363 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc10 B OE2 GLU 245 B GLU 363 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc11 E FE FE . B FE 501 1_555 F NAQ UVU . B UVU 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc12 E FE FE . B FE 501 1_555 H O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
#
_chem_comp.formula           'C25 H24 N8 O2 S' 
_chem_comp.formula_weight    500.575 
_chem_comp.id                UVU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-ethyl-8-[(2-methylimidazo[2,1-b][1,3]thiazol-6-yl)methyl]-7-[[4-(1-methylpyrazol-3-yl)phenyl]methyl]purine-2,6-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAK CAJ UVU doub 358 n y 
CAK NBG UVU sing 359 n y 
CAJ CAZ UVU sing 360 n y 
CAC NBG UVU sing 361 n n 
NBG NAS UVU sing 362 n y 
CAB CAV UVU sing 363 n n 
CAZ NAS UVU doub 364 n y 
CAZ CAY UVU sing 365 n n 
CAL CAV UVU doub 366 n y 
CAL NBJ UVU sing 367 n y 
CAH CAY UVU doub 368 n y 
CAH CAF UVU sing 369 n y 
CAV SAU UVU sing 370 n y 
O2 C2 UVU doub 371 n n 
CAY CAI UVU sing 372 n y 
CAN N3 UVU sing 373 n n 
CAN CAA UVU sing 374 n n 
C2 N3 UVU sing 375 n n 
C2 N1 UVU sing 376 n n 
NBJ CAM UVU sing 377 n y 
NBJ CBD UVU sing 378 n y 
CAF CAW UVU doub 379 n y 
N3 C4 UVU sing 380 n n 
N1 C6 UVU sing 381 n n 
CAM CAX UVU doub 382 n y 
CAI CAG UVU doub 383 n y 
SAU CBD UVU sing 384 n y 
C4 C5 UVU doub 385 n y 
C4 N9 UVU sing 386 n y 
C6 C5 UVU sing 387 n n 
C6 O6 UVU doub 388 n n 
CBD NAQ UVU doub 389 n y 
C5 N7 UVU sing 390 n y 
N9 C8 UVU doub 391 n y 
CAW CAG UVU sing 392 n y 
CAW CAP UVU sing 393 n n 
CAX NAQ UVU sing 394 n y 
CAX CAO UVU sing 395 n n 
C8 N7 UVU sing 396 n y 
C8 CAO UVU sing 397 n n 
N7 CAP UVU sing 398 n n 
N1 H1 UVU sing 399 n n 
CAC H2 UVU sing 400 n n 
CAC H3 UVU sing 401 n n 
CAC H4 UVU sing 402 n n 
CAK H5 UVU sing 403 n n 
CAJ H6 UVU sing 404 n n 
CAI H7 UVU sing 405 n n 
CAG H8 UVU sing 406 n n 
CAH H9 UVU sing 407 n n 
CAF H10 UVU sing 408 n n 
CAP H11 UVU sing 409 n n 
CAP H12 UVU sing 410 n n 
CAN H13 UVU sing 411 n n 
CAN H14 UVU sing 412 n n 
CAA H15 UVU sing 413 n n 
CAA H16 UVU sing 414 n n 
CAA H17 UVU sing 415 n n 
CAO H18 UVU sing 416 n n 
CAO H19 UVU sing 417 n n 
CAB H20 UVU sing 418 n n 
CAB H21 UVU sing 419 n n 
CAB H22 UVU sing 420 n n 
CAL H23 UVU sing 421 n n 
CAM H24 UVU sing 422 n n 
#
_atom_sites.entry_id                     9HB8 
_atom_sites.fract_transf_matrix[1][1]    0.00995 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010626 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011374 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FE A 1 501 1 FE FE . 
D 3 UVU A 1 502 1 UVU DRG . 
E 2 FE B 1 501 2 FE FE . 
F 3 UVU B 1 502 2 UVU DRG . 
G 4 HOH A 1 601 2 HOH HOH . 
H 4 HOH B 1 601 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 UVU . . . D 3 122.134 14.049 7.923 1 96.88 ? C4 UVU 502 A 1 
HETATM 2 C C5 UVU . . . D 3 123.268 14.594 7.449 1 96.41 ? C5 UVU 502 A 1 
HETATM 3 C C6 UVU . . . D 3 123.3 15.887 7.106 1 92.53 ? C6 UVU 502 A 1 
HETATM 4 C C8 UVU . . . D 3 123.635 12.528 7.892 1 99.61 ? C8 UVU 502 A 1 
HETATM 5 N N1 UVU . . . D 3 122.153 16.668 7.236 1 91.48 ? N1 UVU 502 A 1 
HETATM 6 N N3 UVU . . . D 3 121.012 14.779 8.06 1 94.71 ? N3 UVU 502 A 1 
HETATM 7 C CAC UVU . . . D 3 131.613 17.911 11.891 1 102.62 ? CAC UVU 502 A 1 
HETATM 8 N NBG UVU . . . D 3 130.313 17.235 11.683 1 101.91 ? NBG UVU 502 A 1 
HETATM 9 N NAS UVU . . . D 3 129.924 16.768 10.624 1 102.33 ? NAS UVU 502 A 1 
HETATM 10 C CAK UVU . . . D 3 129.393 17.049 12.633 1 100.74 ? CAK UVU 502 A 1 
HETATM 11 C CAJ UVU . . . D 3 128.366 16.413 12.084 1 101.05 ? CAJ UVU 502 A 1 
HETATM 12 C CAZ UVU . . . D 3 128.717 16.248 10.82 1 102.52 ? CAZ UVU 502 A 1 
HETATM 13 C CAY UVU . . . D 3 127.973 15.64 9.896 1 103.71 ? CAY UVU 502 A 1 
HETATM 14 C CAI UVU . . . D 3 128.437 15.502 8.591 1 105.29 ? CAI UVU 502 A 1 
HETATM 15 C CAG UVU . . . D 3 127.661 14.862 7.628 1 106.39 ? CAG UVU 502 A 1 
HETATM 16 C CAH UVU . . . D 3 126.726 15.132 10.239 1 104.5 ? CAH UVU 502 A 1 
HETATM 17 C CAF UVU . . . D 3 125.953 14.49 9.276 1 107.36 ? CAF UVU 502 A 1 
HETATM 18 C CAW UVU . . . D 3 126.412 14.352 7.967 1 106.31 ? CAW UVU 502 A 1 
HETATM 19 C CAP UVU . . . D 3 125.634 13.708 6.997 1 103.24 ? CAP UVU 502 A 1 
HETATM 20 N N7 UVU . . . D 3 124.204 13.636 7.431 1 99.96 ? N7 UVU 502 A 1 
HETATM 21 O O6 UVU . . . D 3 124.32 16.42 6.671 1 90.86 ? O6 UVU 502 A 1 
HETATM 22 C C2 UVU . . . D 3 120.998 16.075 7.728 1 92.14 ? C2 UVU 502 A 1 
HETATM 23 O O2 UVU . . . D 3 119.972 16.74 7.855 1 91.98 ? O2 UVU 502 A 1 
HETATM 24 C CAN UVU . . . D 3 119.777 14.148 8.583 1 94.32 ? CAN UVU 502 A 1 
HETATM 25 C CAA UVU . . . D 3 118.854 13.726 7.438 1 93.86 ? CAA UVU 502 A 1 
HETATM 26 N N9 UVU . . . D 3 122.366 12.763 8.19 1 98.67 ? N9 UVU 502 A 1 
HETATM 27 C CAO UVU . . . D 3 124.338 11.172 8.019 1 100.48 ? CAO UVU 502 A 1 
HETATM 28 C CAX UVU . . . D 3 124.652 10.761 9.461 1 101.69 ? CAX UVU 502 A 1 
HETATM 29 N NAQ UVU . . . D 3 125.341 9.673 9.769 1 103.16 ? NAQ UVU 502 A 1 
HETATM 30 C CBD UVU . . . D 3 125.423 9.628 11.095 1 104.7 ? CBD UVU 502 A 1 
HETATM 31 S SAU UVU . . . D 3 126.039 8.727 12.367 1 73 ? SAU UVU 502 A 1 
HETATM 32 C CAV UVU . . . D 3 125.474 9.701 13.509 1 108.11 ? CAV UVU 502 A 1 
HETATM 33 C CAB UVU . . . D 3 125.671 9.482 15.011 1 108.22 ? CAB UVU 502 A 1 
HETATM 34 C CAL UVU . . . D 3 124.814 10.723 12.952 1 106.73 ? CAL UVU 502 A 1 
HETATM 35 N NBJ UVU . . . D 3 124.776 10.697 11.603 1 104.57 ? NBJ UVU 502 A 1 
HETATM 36 C CAM UVU . . . D 3 124.296 11.399 10.568 1 102.63 ? CAM UVU 502 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           474 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           36 
#