data_9HBF
#
_model_server_result.job_id            vRxWaRxHjBo51tO6sKu7NQ 
_model_server_result.datetime_utc      '2025-06-27 15:09:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9hbf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":103}' 
#
_entry.id    9HBF 
#
_exptl.entry_id    9HBF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9HBF 
_cell.length_a            87.973 
_cell.length_b            87.973 
_cell.length_c            87.973 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9HBF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    'I 2 2 3' 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 249 n n 
C1 C2 GOL sing 250 n n 
C1 H11 GOL sing 251 n n 
C1 H12 GOL sing 252 n n 
O1 HO1 GOL sing 253 n n 
C2 O2 GOL sing 254 n n 
C2 C3 GOL sing 255 n n 
C2 H2 GOL sing 256 n n 
O2 HO2 GOL sing 257 n n 
C3 O3 GOL sing 258 n n 
C3 H31 GOL sing 259 n n 
C3 H32 GOL sing 260 n n 
O3 HO3 GOL sing 261 n n 
#
_atom_sites.entry_id                     9HBF 
_atom_sites.fract_transf_matrix[1][1]    0.011367 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011367 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011367 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 7AZ A 1 101 101 7AZ 7AZ . 
C 3 GOL A 1 102 201 GOL GOL . 
D 3 GOL A 1 103 301 GOL GOL . 
E 4 HOH A 1 201 102 HOH HOH . 
E 4 HOH A 2 202 52 HOH HOH . 
E 4 HOH A 3 203 6 HOH HOH . 
E 4 HOH A 4 204 35 HOH HOH . 
E 4 HOH A 5 205 32 HOH HOH . 
E 4 HOH A 6 206 2 HOH HOH . 
E 4 HOH A 7 207 15 HOH HOH . 
E 4 HOH A 8 208 57 HOH HOH . 
E 4 HOH A 9 209 86 HOH HOH . 
E 4 HOH A 10 210 14 HOH HOH . 
E 4 HOH A 11 211 64 HOH HOH . 
E 4 HOH A 12 212 29 HOH HOH . 
E 4 HOH A 13 213 60 HOH HOH . 
E 4 HOH A 14 214 61 HOH HOH . 
E 4 HOH A 15 215 108 HOH HOH . 
E 4 HOH A 16 216 25 HOH HOH . 
E 4 HOH A 17 217 5 HOH HOH . 
E 4 HOH A 18 218 81 HOH HOH . 
E 4 HOH A 19 219 23 HOH HOH . 
E 4 HOH A 20 220 40 HOH HOH . 
E 4 HOH A 21 221 26 HOH HOH . 
E 4 HOH A 22 222 16 HOH HOH . 
E 4 HOH A 23 223 74 HOH HOH . 
E 4 HOH A 24 224 4 HOH HOH . 
E 4 HOH A 25 225 8 HOH HOH . 
E 4 HOH A 26 226 36 HOH HOH . 
E 4 HOH A 27 227 100 HOH HOH . 
E 4 HOH A 28 228 50 HOH HOH . 
E 4 HOH A 29 229 27 HOH HOH . 
E 4 HOH A 30 230 22 HOH HOH . 
E 4 HOH A 31 231 12 HOH HOH . 
E 4 HOH A 32 232 70 HOH HOH . 
E 4 HOH A 33 233 69 HOH HOH . 
E 4 HOH A 34 234 79 HOH HOH . 
E 4 HOH A 35 235 7 HOH HOH . 
E 4 HOH A 36 236 63 HOH HOH . 
E 4 HOH A 37 237 97 HOH HOH . 
E 4 HOH A 38 238 56 HOH HOH . 
E 4 HOH A 39 239 38 HOH HOH . 
E 4 HOH A 40 240 46 HOH HOH . 
E 4 HOH A 41 241 41 HOH HOH . 
E 4 HOH A 42 242 96 HOH HOH . 
E 4 HOH A 43 243 71 HOH HOH . 
E 4 HOH A 44 244 9 HOH HOH . 
E 4 HOH A 45 245 120 HOH HOH . 
E 4 HOH A 46 246 21 HOH HOH . 
E 4 HOH A 47 247 105 HOH HOH . 
E 4 HOH A 48 248 68 HOH HOH . 
E 4 HOH A 49 249 13 HOH HOH . 
E 4 HOH A 50 250 113 HOH HOH . 
E 4 HOH A 51 251 42 HOH HOH . 
E 4 HOH A 52 252 20 HOH HOH . 
E 4 HOH A 53 253 1 HOH HOH . 
E 4 HOH A 54 254 65 HOH HOH . 
E 4 HOH A 55 255 51 HOH HOH . 
E 4 HOH A 56 256 45 HOH HOH . 
E 4 HOH A 57 257 121 HOH HOH . 
E 4 HOH A 58 258 10 HOH HOH . 
E 4 HOH A 59 259 19 HOH HOH . 
E 4 HOH A 60 260 49 HOH HOH . 
E 4 HOH A 61 261 87 HOH HOH . 
E 4 HOH A 62 262 111 HOH HOH . 
E 4 HOH A 63 263 34 HOH HOH . 
E 4 HOH A 64 264 11 HOH HOH . 
E 4 HOH A 65 265 3 HOH HOH . 
E 4 HOH A 66 266 54 HOH HOH . 
E 4 HOH A 67 267 28 HOH HOH . 
E 4 HOH A 68 268 62 HOH HOH . 
E 4 HOH A 69 269 39 HOH HOH . 
E 4 HOH A 70 270 30 HOH HOH . 
E 4 HOH A 71 271 43 HOH HOH . 
E 4 HOH A 72 272 76 HOH HOH . 
E 4 HOH A 73 273 33 HOH HOH . 
E 4 HOH A 74 274 44 HOH HOH . 
E 4 HOH A 75 275 85 HOH HOH . 
E 4 HOH A 76 276 47 HOH HOH . 
E 4 HOH A 77 277 98 HOH HOH . 
E 4 HOH A 78 278 99 HOH HOH . 
E 4 HOH A 79 279 17 HOH HOH . 
E 4 HOH A 80 280 31 HOH HOH . 
E 4 HOH A 81 281 119 HOH HOH . 
E 4 HOH A 82 282 80 HOH HOH . 
E 4 HOH A 83 283 112 HOH HOH . 
E 4 HOH A 84 284 75 HOH HOH . 
E 4 HOH A 85 285 127 HOH HOH . 
E 4 HOH A 86 286 92 HOH HOH . 
E 4 HOH A 87 287 114 HOH HOH . 
E 4 HOH A 88 288 91 HOH HOH . 
E 4 HOH A 89 289 53 HOH HOH . 
E 4 HOH A 90 290 78 HOH HOH . 
E 4 HOH A 91 291 103 HOH HOH . 
E 4 HOH A 92 292 118 HOH HOH . 
E 4 HOH A 93 293 116 HOH HOH . 
E 4 HOH A 94 294 58 HOH HOH . 
E 4 HOH A 95 295 84 HOH HOH . 
E 4 HOH A 96 296 88 HOH HOH . 
E 4 HOH A 97 297 24 HOH HOH . 
E 4 HOH A 98 298 106 HOH HOH . 
E 4 HOH A 99 299 66 HOH HOH . 
E 4 HOH A 100 300 117 HOH HOH . 
E 4 HOH A 101 301 89 HOH HOH . 
E 4 HOH A 102 302 90 HOH HOH . 
E 4 HOH A 103 303 125 HOH HOH . 
E 4 HOH A 104 304 77 HOH HOH . 
E 4 HOH A 105 305 73 HOH HOH . 
E 4 HOH A 106 306 18 HOH HOH . 
E 4 HOH A 107 307 83 HOH HOH . 
E 4 HOH A 108 308 95 HOH HOH . 
E 4 HOH A 109 309 104 HOH HOH . 
E 4 HOH A 110 310 101 HOH HOH . 
E 4 HOH A 111 311 126 HOH HOH . 
E 4 HOH A 112 312 55 HOH HOH . 
E 4 HOH A 113 313 48 HOH HOH . 
E 4 HOH A 114 314 107 HOH HOH . 
E 4 HOH A 115 315 37 HOH HOH . 
E 4 HOH A 116 316 123 HOH HOH . 
E 4 HOH A 117 317 94 HOH HOH . 
E 4 HOH A 118 318 67 HOH HOH . 
E 4 HOH A 119 319 115 HOH HOH . 
E 4 HOH A 120 320 110 HOH HOH . 
E 4 HOH A 121 321 93 HOH HOH . 
E 4 HOH A 122 322 82 HOH HOH . 
E 4 HOH A 123 323 59 HOH HOH . 
E 4 HOH A 124 324 72 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 1.894 21.502 17.993 1 22.68 ? C1 GOL 103 A 1 
HETATM 2 O O1 GOL . . . D 3 2.65 22.393 18.792 1 22.61 ? O1 GOL 103 A 1 
HETATM 3 C C2 GOL . . . D 3 1.29 22.246 16.823 1 19.07 ? C2 GOL 103 A 1 
HETATM 4 O O2 GOL . . . D 3 0.437 23.263 17.317 1 19.14 ? O2 GOL 103 A 1 
HETATM 5 C C3 GOL . . . D 3 0.581 21.288 15.865 1 18.6 ? C3 GOL 103 A 1 
HETATM 6 O O3 GOL . . . D 3 -0.303 20.447 16.585 1 18.03 ? O3 GOL 103 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           881 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#