data_9HH5 # _model_server_result.job_id Zsp66cuUNoUeMMxCMVZ4rA _model_server_result.datetime_utc '2025-06-21 19:16:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9hh5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 9HH5 # _exptl.entry_id 9HH5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9HH5 _cell.length_a 151.408 _cell.length_b 151.408 _cell.length_c 109.302 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HH5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -75.704 131.123174 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -151.408 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 383 n n C C2 TRS sing 384 n n C C3 TRS sing 385 n n C N TRS sing 386 n n C1 O1 TRS sing 387 n n C1 H11 TRS sing 388 n n C1 H12 TRS sing 389 n n C2 O2 TRS sing 390 n n C2 H21 TRS sing 391 n n C2 H22 TRS sing 392 n n C3 O3 TRS sing 393 n n C3 H31 TRS sing 394 n n C3 H32 TRS sing 395 n n N HN1 TRS sing 396 n n N HN2 TRS sing 397 n n N HN3 TRS sing 398 n n O1 HO1 TRS sing 399 n n O2 HO2 TRS sing 400 n n O3 HO3 TRS sing 401 n n # _atom_sites.entry_id 9HH5 _atom_sites.fract_transf_matrix[1][1] 0.006605 _atom_sites.fract_transf_matrix[1][2] 0.003813 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007626 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009149 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TRS A 1 401 2 TRS TRS . D 4 GXU A 1 402 3 GXU GXU . E 3 TRS B 1 401 1 TRS TRS . F 5 HOH A 1 501 24 HOH HOH . F 5 HOH A 2 502 119 HOH HOH . F 5 HOH A 3 503 184 HOH HOH . F 5 HOH A 4 504 40 HOH HOH . F 5 HOH A 5 505 16 HOH HOH . F 5 HOH A 6 506 178 HOH HOH . F 5 HOH A 7 507 71 HOH HOH . F 5 HOH A 8 508 137 HOH HOH . F 5 HOH A 9 509 104 HOH HOH . F 5 HOH A 10 510 155 HOH HOH . F 5 HOH A 11 511 42 HOH HOH . F 5 HOH A 12 512 50 HOH HOH . F 5 HOH A 13 513 269 HOH HOH . F 5 HOH A 14 514 204 HOH HOH . F 5 HOH A 15 515 7 HOH HOH . F 5 HOH A 16 516 31 HOH HOH . F 5 HOH A 17 517 241 HOH HOH . F 5 HOH A 18 518 142 HOH HOH . F 5 HOH A 19 519 100 HOH HOH . F 5 HOH A 20 520 85 HOH HOH . F 5 HOH A 21 521 92 HOH HOH . F 5 HOH A 22 522 98 HOH HOH . F 5 HOH A 23 523 110 HOH HOH . F 5 HOH A 24 524 3 HOH HOH . F 5 HOH A 25 525 159 HOH HOH . F 5 HOH A 26 526 59 HOH HOH . F 5 HOH A 27 527 74 HOH HOH . F 5 HOH A 28 528 116 HOH HOH . F 5 HOH A 29 529 271 HOH HOH . F 5 HOH A 30 530 22 HOH HOH . F 5 HOH A 31 531 233 HOH HOH . F 5 HOH A 32 532 117 HOH HOH . F 5 HOH A 33 533 135 HOH HOH . F 5 HOH A 34 534 115 HOH HOH . F 5 HOH A 35 535 128 HOH HOH . F 5 HOH A 36 536 133 HOH HOH . F 5 HOH A 37 537 187 HOH HOH . F 5 HOH A 38 538 81 HOH HOH . F 5 HOH A 39 539 247 HOH HOH . F 5 HOH A 40 540 72 HOH HOH . F 5 HOH A 41 541 35 HOH HOH . F 5 HOH A 42 542 102 HOH HOH . F 5 HOH A 43 543 238 HOH HOH . F 5 HOH A 44 544 56 HOH HOH . F 5 HOH A 45 545 205 HOH HOH . F 5 HOH A 46 546 251 HOH HOH . F 5 HOH A 47 547 118 HOH HOH . F 5 HOH A 48 548 126 HOH HOH . F 5 HOH A 49 549 101 HOH HOH . F 5 HOH A 50 550 168 HOH HOH . F 5 HOH A 51 551 219 HOH HOH . F 5 HOH A 52 552 164 HOH HOH . F 5 HOH A 53 553 175 HOH HOH . F 5 HOH A 54 554 120 HOH HOH . F 5 HOH A 55 555 209 HOH HOH . F 5 HOH A 56 556 95 HOH HOH . F 5 HOH A 57 557 77 HOH HOH . F 5 HOH A 58 558 91 HOH HOH . F 5 HOH A 59 559 218 HOH HOH . F 5 HOH A 60 560 25 HOH HOH . F 5 HOH A 61 561 109 HOH HOH . F 5 HOH A 62 562 161 HOH HOH . F 5 HOH A 63 563 97 HOH HOH . F 5 HOH A 64 564 188 HOH HOH . F 5 HOH A 65 565 124 HOH HOH . F 5 HOH A 66 566 191 HOH HOH . F 5 HOH A 67 567 141 HOH HOH . F 5 HOH A 68 568 37 HOH HOH . F 5 HOH A 69 569 18 HOH HOH . F 5 HOH A 70 570 87 HOH HOH . F 5 HOH A 71 571 63 HOH HOH . F 5 HOH A 72 572 10 HOH HOH . F 5 HOH A 73 573 225 HOH HOH . F 5 HOH A 74 574 248 HOH HOH . F 5 HOH A 75 575 13 HOH HOH . F 5 HOH A 76 576 62 HOH HOH . F 5 HOH A 77 577 125 HOH HOH . F 5 HOH A 78 578 131 HOH HOH . F 5 HOH A 79 579 202 HOH HOH . F 5 HOH A 80 580 144 HOH HOH . F 5 HOH A 81 581 275 HOH HOH . F 5 HOH A 82 582 197 HOH HOH . F 5 HOH A 83 583 61 HOH HOH . F 5 HOH A 84 584 212 HOH HOH . F 5 HOH A 85 585 226 HOH HOH . F 5 HOH A 86 586 237 HOH HOH . F 5 HOH A 87 587 2 HOH HOH . F 5 HOH A 88 588 30 HOH HOH . F 5 HOH A 89 589 283 HOH HOH . F 5 HOH A 90 590 223 HOH HOH . F 5 HOH A 91 591 270 HOH HOH . F 5 HOH A 92 592 99 HOH HOH . F 5 HOH A 93 593 265 HOH HOH . F 5 HOH A 94 594 8 HOH HOH . F 5 HOH A 95 595 49 HOH HOH . F 5 HOH A 96 596 68 HOH HOH . F 5 HOH A 97 597 180 HOH HOH . F 5 HOH A 98 598 11 HOH HOH . F 5 HOH A 99 599 52 HOH HOH . F 5 HOH A 100 600 82 HOH HOH . F 5 HOH A 101 601 69 HOH HOH . F 5 HOH A 102 602 211 HOH HOH . F 5 HOH A 103 603 183 HOH HOH . F 5 HOH A 104 604 6 HOH HOH . F 5 HOH A 105 605 235 HOH HOH . F 5 HOH A 106 606 217 HOH HOH . F 5 HOH A 107 607 36 HOH HOH . F 5 HOH A 108 608 90 HOH HOH . F 5 HOH A 109 609 224 HOH HOH . F 5 HOH A 110 610 139 HOH HOH . F 5 HOH A 111 611 250 HOH HOH . F 5 HOH A 112 612 107 HOH HOH . F 5 HOH A 113 613 198 HOH HOH . F 5 HOH A 114 614 39 HOH HOH . F 5 HOH A 115 615 160 HOH HOH . F 5 HOH A 116 616 171 HOH HOH . F 5 HOH A 117 617 76 HOH HOH . F 5 HOH A 118 618 88 HOH HOH . F 5 HOH A 119 619 79 HOH HOH . F 5 HOH A 120 620 229 HOH HOH . F 5 HOH A 121 621 273 HOH HOH . F 5 HOH A 122 622 195 HOH HOH . F 5 HOH A 123 623 105 HOH HOH . F 5 HOH A 124 624 89 HOH HOH . F 5 HOH A 125 625 278 HOH HOH . F 5 HOH A 126 626 170 HOH HOH . F 5 HOH A 127 627 28 HOH HOH . F 5 HOH A 128 628 129 HOH HOH . F 5 HOH A 129 629 94 HOH HOH . F 5 HOH A 130 630 34 HOH HOH . F 5 HOH A 131 631 111 HOH HOH . F 5 HOH A 132 632 277 HOH HOH . F 5 HOH A 133 633 182 HOH HOH . F 5 HOH A 134 634 57 HOH HOH . F 5 HOH A 135 635 152 HOH HOH . F 5 HOH A 136 636 162 HOH HOH . F 5 HOH A 137 637 249 HOH HOH . F 5 HOH A 138 638 46 HOH HOH . F 5 HOH A 139 639 1 HOH HOH . F 5 HOH A 140 640 207 HOH HOH . F 5 HOH A 141 641 58 HOH HOH . F 5 HOH A 142 642 190 HOH HOH . F 5 HOH A 143 643 23 HOH HOH . F 5 HOH A 144 644 210 HOH HOH . F 5 HOH A 145 645 106 HOH HOH . F 5 HOH A 146 646 83 HOH HOH . F 5 HOH A 147 647 167 HOH HOH . F 5 HOH A 148 648 280 HOH HOH . F 5 HOH A 149 649 55 HOH HOH . F 5 HOH A 150 650 38 HOH HOH . F 5 HOH A 151 651 268 HOH HOH . F 5 HOH A 152 652 236 HOH HOH . F 5 HOH A 153 653 255 HOH HOH . F 5 HOH A 154 654 112 HOH HOH . F 5 HOH A 155 655 234 HOH HOH . F 5 HOH A 156 656 262 HOH HOH . F 5 HOH A 157 657 169 HOH HOH . F 5 HOH A 158 658 245 HOH HOH . F 5 HOH A 159 659 130 HOH HOH . F 5 HOH A 160 660 214 HOH HOH . F 5 HOH A 161 661 232 HOH HOH . F 5 HOH A 162 662 282 HOH HOH . F 5 HOH A 163 663 173 HOH HOH . F 5 HOH A 164 664 158 HOH HOH . F 5 HOH A 165 665 194 HOH HOH . F 5 HOH A 166 666 286 HOH HOH . F 5 HOH A 167 667 285 HOH HOH . F 5 HOH A 168 668 192 HOH HOH . F 5 HOH A 169 669 216 HOH HOH . F 5 HOH A 170 670 281 HOH HOH . F 5 HOH A 171 671 267 HOH HOH . F 5 HOH A 172 672 165 HOH HOH . F 5 HOH A 173 673 166 HOH HOH . F 5 HOH A 174 674 215 HOH HOH . F 5 HOH A 175 675 132 HOH HOH . F 5 HOH A 176 676 254 HOH HOH . F 5 HOH A 177 677 239 HOH HOH . F 5 HOH A 178 678 122 HOH HOH . F 5 HOH A 179 679 208 HOH HOH . G 5 HOH B 1 501 78 HOH HOH . G 5 HOH B 2 502 44 HOH HOH . G 5 HOH B 3 503 272 HOH HOH . G 5 HOH B 4 504 103 HOH HOH . G 5 HOH B 5 505 244 HOH HOH . G 5 HOH B 6 506 258 HOH HOH . G 5 HOH B 7 507 181 HOH HOH . G 5 HOH B 8 508 253 HOH HOH . G 5 HOH B 9 509 148 HOH HOH . G 5 HOH B 10 510 113 HOH HOH . G 5 HOH B 11 511 43 HOH HOH . G 5 HOH B 12 512 73 HOH HOH . G 5 HOH B 13 513 134 HOH HOH . G 5 HOH B 14 514 96 HOH HOH . G 5 HOH B 15 515 185 HOH HOH . G 5 HOH B 16 516 114 HOH HOH . G 5 HOH B 17 517 41 HOH HOH . G 5 HOH B 18 518 199 HOH HOH . G 5 HOH B 19 519 33 HOH HOH . G 5 HOH B 20 520 256 HOH HOH . G 5 HOH B 21 521 48 HOH HOH . G 5 HOH B 22 522 230 HOH HOH . G 5 HOH B 23 523 231 HOH HOH . G 5 HOH B 24 524 228 HOH HOH . G 5 HOH B 25 525 21 HOH HOH . G 5 HOH B 26 526 179 HOH HOH . G 5 HOH B 27 527 54 HOH HOH . G 5 HOH B 28 528 274 HOH HOH . G 5 HOH B 29 529 65 HOH HOH . G 5 HOH B 30 530 86 HOH HOH . G 5 HOH B 31 531 12 HOH HOH . G 5 HOH B 32 532 17 HOH HOH . G 5 HOH B 33 533 75 HOH HOH . G 5 HOH B 34 534 27 HOH HOH . G 5 HOH B 35 535 203 HOH HOH . G 5 HOH B 36 536 145 HOH HOH . G 5 HOH B 37 537 29 HOH HOH . G 5 HOH B 38 538 261 HOH HOH . G 5 HOH B 39 539 5 HOH HOH . G 5 HOH B 40 540 242 HOH HOH . G 5 HOH B 41 541 123 HOH HOH . G 5 HOH B 42 542 276 HOH HOH . G 5 HOH B 43 543 60 HOH HOH . G 5 HOH B 44 544 70 HOH HOH . G 5 HOH B 45 545 121 HOH HOH . G 5 HOH B 46 546 150 HOH HOH . G 5 HOH B 47 547 67 HOH HOH . G 5 HOH B 48 548 66 HOH HOH . G 5 HOH B 49 549 193 HOH HOH . G 5 HOH B 50 550 213 HOH HOH . G 5 HOH B 51 551 246 HOH HOH . G 5 HOH B 52 552 20 HOH HOH . G 5 HOH B 53 553 176 HOH HOH . G 5 HOH B 54 554 64 HOH HOH . G 5 HOH B 55 555 186 HOH HOH . G 5 HOH B 56 556 153 HOH HOH . G 5 HOH B 57 557 279 HOH HOH . G 5 HOH B 58 558 189 HOH HOH . G 5 HOH B 59 559 157 HOH HOH . G 5 HOH B 60 560 45 HOH HOH . G 5 HOH B 61 561 140 HOH HOH . G 5 HOH B 62 562 284 HOH HOH . G 5 HOH B 63 563 149 HOH HOH . G 5 HOH B 64 564 53 HOH HOH . G 5 HOH B 65 565 26 HOH HOH . G 5 HOH B 66 566 146 HOH HOH . G 5 HOH B 67 567 32 HOH HOH . G 5 HOH B 68 568 143 HOH HOH . G 5 HOH B 69 569 47 HOH HOH . G 5 HOH B 70 570 266 HOH HOH . G 5 HOH B 71 571 220 HOH HOH . G 5 HOH B 72 572 196 HOH HOH . G 5 HOH B 73 573 138 HOH HOH . G 5 HOH B 74 574 172 HOH HOH . G 5 HOH B 75 575 136 HOH HOH . G 5 HOH B 76 576 14 HOH HOH . G 5 HOH B 77 577 9 HOH HOH . G 5 HOH B 78 578 15 HOH HOH . G 5 HOH B 79 579 177 HOH HOH . G 5 HOH B 80 580 127 HOH HOH . G 5 HOH B 81 581 163 HOH HOH . G 5 HOH B 82 582 51 HOH HOH . G 5 HOH B 83 583 93 HOH HOH . G 5 HOH B 84 584 227 HOH HOH . G 5 HOH B 85 585 147 HOH HOH . G 5 HOH B 86 586 80 HOH HOH . G 5 HOH B 87 587 84 HOH HOH . G 5 HOH B 88 588 108 HOH HOH . G 5 HOH B 89 589 263 HOH HOH . G 5 HOH B 90 590 4 HOH HOH . G 5 HOH B 91 591 200 HOH HOH . G 5 HOH B 92 592 19 HOH HOH . G 5 HOH B 93 593 243 HOH HOH . G 5 HOH B 94 594 221 HOH HOH . G 5 HOH B 95 595 206 HOH HOH . G 5 HOH B 96 596 174 HOH HOH . G 5 HOH B 97 597 264 HOH HOH . G 5 HOH B 98 598 201 HOH HOH . G 5 HOH B 99 599 222 HOH HOH . G 5 HOH B 100 600 259 HOH HOH . G 5 HOH B 101 601 156 HOH HOH . G 5 HOH B 102 602 151 HOH HOH . G 5 HOH B 103 603 154 HOH HOH . G 5 HOH B 104 604 240 HOH HOH . G 5 HOH B 105 605 252 HOH HOH . G 5 HOH B 106 606 257 HOH HOH . G 5 HOH B 107 607 260 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 -67.242 37.984 -14.49 1 53.89 ? C TRS 401 A 1 HETATM 2 C C1 TRS . . . C 3 -67.713 37.581 -15.885 1 54.29 ? C1 TRS 401 A 1 HETATM 3 C C2 TRS . . . C 3 -66.571 39.355 -14.528 1 54.1 ? C2 TRS 401 A 1 HETATM 4 C C3 TRS . . . C 3 -66.282 36.936 -13.931 1 53.52 ? C3 TRS 401 A 1 HETATM 5 N N TRS . . . C 3 -68.443 38.068 -13.585 1 53 ? N TRS 401 A 1 HETATM 6 O O1 TRS . . . C 3 -68.869 38.301 -16.286 1 55.78 ? O1 TRS 401 A 1 HETATM 7 O O2 TRS . . . C 3 -66.412 39.904 -13.229 1 52.32 ? O2 TRS 401 A 1 HETATM 8 O O3 TRS . . . C 3 -66.942 36.004 -13.089 1 52.69 ? O3 TRS 401 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #