data_9HRV # _model_server_result.job_id npq1YbdrndeLC2ZWR8fdlg _model_server_result.datetime_utc '2025-08-21 17:07:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9hrv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 9HRV # _exptl.entry_id 9HRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-fructopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9HRV _cell.length_a 46.709 _cell.length_b 46.709 _cell.length_c 102.923 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'R 3' _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BDF _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BDF sing 145 n n C1 O1 BDF sing 146 n n C1 H11 BDF sing 147 n n C1 H12 BDF sing 148 n n C2 C3 BDF sing 149 n n C2 O2 BDF sing 150 n n C2 O6 BDF sing 151 n n C3 C4 BDF sing 152 n n C3 O3 BDF sing 153 n n C3 H3 BDF sing 154 n n C4 C5 BDF sing 155 n n C4 O4 BDF sing 156 n n C4 H4 BDF sing 157 n n C5 C6 BDF sing 158 n n C5 O5 BDF sing 159 n n C5 H5 BDF sing 160 n n C6 O6 BDF sing 161 n n C6 H61 BDF sing 162 n n C6 H62 BDF sing 163 n n O1 HO1 BDF sing 164 n n O2 HO2 BDF sing 165 n n O3 HO3 BDF sing 166 n n O4 HO4 BDF sing 167 n n O5 HO5 BDF sing 168 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BDF DFrupb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BDF b-D-fructopyranose 'COMMON NAME' GMML 1 BDF b-D-Frup 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BDF Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 9HRV _atom_sites.fract_transf_matrix[1][1] 0.021409 _atom_sites.fract_transf_matrix[1][2] 0.012361 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009716 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BDF A 1 101 101 BDF BDF . C 2 BDF A 1 102 102 BDF BDF . D 3 A1IXG A 1 103 103 A1IXG PCT . E 3 A1IXG A 1 104 104 A1IXG PCT . F 4 HOH A 1 201 96 HOH HOH . F 4 HOH A 2 202 111 HOH HOH . F 4 HOH A 3 203 168 HOH HOH . F 4 HOH A 4 204 157 HOH HOH . F 4 HOH A 5 205 103 HOH HOH . F 4 HOH A 6 206 64 HOH HOH . F 4 HOH A 7 207 167 HOH HOH . F 4 HOH A 8 208 50 HOH HOH . F 4 HOH A 9 209 163 HOH HOH . F 4 HOH A 10 210 82 HOH HOH . F 4 HOH A 11 211 1 HOH HOH . F 4 HOH A 12 212 86 HOH HOH . F 4 HOH A 13 213 22 HOH HOH . F 4 HOH A 14 214 31 HOH HOH . F 4 HOH A 15 215 131 HOH HOH . F 4 HOH A 16 216 57 HOH HOH . F 4 HOH A 17 217 142 HOH HOH . F 4 HOH A 18 218 69 HOH HOH . F 4 HOH A 19 219 25 HOH HOH . F 4 HOH A 20 220 101 HOH HOH . F 4 HOH A 21 221 115 HOH HOH . F 4 HOH A 22 222 7 HOH HOH . F 4 HOH A 23 223 42 HOH HOH . F 4 HOH A 24 224 13 HOH HOH . F 4 HOH A 25 225 65 HOH HOH . F 4 HOH A 26 226 88 HOH HOH . F 4 HOH A 27 227 45 HOH HOH . F 4 HOH A 28 228 109 HOH HOH . F 4 HOH A 29 229 4 HOH HOH . F 4 HOH A 30 230 173 HOH HOH . F 4 HOH A 31 231 11 HOH HOH . F 4 HOH A 32 232 46 HOH HOH . F 4 HOH A 33 233 55 HOH HOH . F 4 HOH A 34 234 27 HOH HOH . F 4 HOH A 35 235 2 HOH HOH . F 4 HOH A 36 236 146 HOH HOH . F 4 HOH A 37 237 21 HOH HOH . F 4 HOH A 38 238 12 HOH HOH . F 4 HOH A 39 239 61 HOH HOH . F 4 HOH A 40 240 105 HOH HOH . F 4 HOH A 41 241 87 HOH HOH . F 4 HOH A 42 242 120 HOH HOH . F 4 HOH A 43 243 117 HOH HOH . F 4 HOH A 44 244 108 HOH HOH . F 4 HOH A 45 245 37 HOH HOH . F 4 HOH A 46 246 81 HOH HOH . F 4 HOH A 47 247 52 HOH HOH . F 4 HOH A 48 248 121 HOH HOH . F 4 HOH A 49 249 68 HOH HOH . F 4 HOH A 50 250 15 HOH HOH . F 4 HOH A 51 251 23 HOH HOH . F 4 HOH A 52 252 41 HOH HOH . F 4 HOH A 53 253 80 HOH HOH . F 4 HOH A 54 254 47 HOH HOH . F 4 HOH A 55 255 20 HOH HOH . F 4 HOH A 56 256 78 HOH HOH . F 4 HOH A 57 257 53 HOH HOH . F 4 HOH A 58 258 100 HOH HOH . F 4 HOH A 59 259 51 HOH HOH . F 4 HOH A 60 260 44 HOH HOH . F 4 HOH A 61 261 33 HOH HOH . F 4 HOH A 62 262 32 HOH HOH . F 4 HOH A 63 263 19 HOH HOH . F 4 HOH A 64 264 159 HOH HOH . F 4 HOH A 65 265 18 HOH HOH . F 4 HOH A 66 266 70 HOH HOH . F 4 HOH A 67 267 83 HOH HOH . F 4 HOH A 68 268 118 HOH HOH . F 4 HOH A 69 269 28 HOH HOH . F 4 HOH A 70 270 14 HOH HOH . F 4 HOH A 71 271 56 HOH HOH . F 4 HOH A 72 272 36 HOH HOH . F 4 HOH A 73 273 72 HOH HOH . F 4 HOH A 74 274 35 HOH HOH . F 4 HOH A 75 275 39 HOH HOH . F 4 HOH A 76 276 38 HOH HOH . F 4 HOH A 77 277 99 HOH HOH . F 4 HOH A 78 278 63 HOH HOH . F 4 HOH A 79 279 16 HOH HOH . F 4 HOH A 80 280 34 HOH HOH . F 4 HOH A 81 281 8 HOH HOH . F 4 HOH A 82 282 104 HOH HOH . F 4 HOH A 83 283 3 HOH HOH . F 4 HOH A 84 284 40 HOH HOH . F 4 HOH A 85 285 160 HOH HOH . F 4 HOH A 86 286 116 HOH HOH . F 4 HOH A 87 287 127 HOH HOH . F 4 HOH A 88 288 156 HOH HOH . F 4 HOH A 89 289 54 HOH HOH . F 4 HOH A 90 290 90 HOH HOH . F 4 HOH A 91 291 26 HOH HOH . F 4 HOH A 92 292 106 HOH HOH . F 4 HOH A 93 293 171 HOH HOH . F 4 HOH A 94 294 126 HOH HOH . F 4 HOH A 95 295 128 HOH HOH . F 4 HOH A 96 296 5 HOH HOH . F 4 HOH A 97 297 89 HOH HOH . F 4 HOH A 98 298 29 HOH HOH . F 4 HOH A 99 299 6 HOH HOH . F 4 HOH A 100 300 43 HOH HOH . F 4 HOH A 101 301 24 HOH HOH . F 4 HOH A 102 302 77 HOH HOH . F 4 HOH A 103 303 98 HOH HOH . F 4 HOH A 104 304 148 HOH HOH . F 4 HOH A 105 305 10 HOH HOH . F 4 HOH A 106 306 71 HOH HOH . F 4 HOH A 107 307 102 HOH HOH . F 4 HOH A 108 308 144 HOH HOH . F 4 HOH A 109 309 138 HOH HOH . F 4 HOH A 110 310 92 HOH HOH . F 4 HOH A 111 311 91 HOH HOH . F 4 HOH A 112 312 76 HOH HOH . F 4 HOH A 113 313 17 HOH HOH . F 4 HOH A 114 314 158 HOH HOH . F 4 HOH A 115 315 79 HOH HOH . F 4 HOH A 116 316 165 HOH HOH . F 4 HOH A 117 317 174 HOH HOH . F 4 HOH A 118 318 162 HOH HOH . F 4 HOH A 119 319 136 HOH HOH . F 4 HOH A 120 320 48 HOH HOH . F 4 HOH A 121 321 94 HOH HOH . F 4 HOH A 122 322 30 HOH HOH . F 4 HOH A 123 323 122 HOH HOH . F 4 HOH A 124 324 95 HOH HOH . F 4 HOH A 125 325 113 HOH HOH . F 4 HOH A 126 326 93 HOH HOH . F 4 HOH A 127 327 112 HOH HOH . F 4 HOH A 128 328 145 HOH HOH . F 4 HOH A 129 329 155 HOH HOH . F 4 HOH A 130 330 49 HOH HOH . F 4 HOH A 131 331 60 HOH HOH . F 4 HOH A 132 332 84 HOH HOH . F 4 HOH A 133 333 75 HOH HOH . F 4 HOH A 134 334 154 HOH HOH . F 4 HOH A 135 335 140 HOH HOH . F 4 HOH A 136 336 169 HOH HOH . F 4 HOH A 137 337 125 HOH HOH . F 4 HOH A 138 338 164 HOH HOH . F 4 HOH A 139 339 134 HOH HOH . F 4 HOH A 140 340 161 HOH HOH . F 4 HOH A 141 341 150 HOH HOH . F 4 HOH A 142 342 124 HOH HOH . F 4 HOH A 143 343 74 HOH HOH . F 4 HOH A 144 344 110 HOH HOH . F 4 HOH A 145 345 62 HOH HOH . F 4 HOH A 146 346 59 HOH HOH . F 4 HOH A 147 347 129 HOH HOH . F 4 HOH A 148 348 135 HOH HOH . F 4 HOH A 149 349 137 HOH HOH . F 4 HOH A 150 350 58 HOH HOH . F 4 HOH A 151 351 66 HOH HOH . F 4 HOH A 152 352 133 HOH HOH . F 4 HOH A 153 353 130 HOH HOH . F 4 HOH A 154 354 97 HOH HOH . F 4 HOH A 155 355 132 HOH HOH . F 4 HOH A 156 356 107 HOH HOH . F 4 HOH A 157 357 166 HOH HOH . F 4 HOH A 158 358 141 HOH HOH . F 4 HOH A 159 359 153 HOH HOH . F 4 HOH A 160 360 139 HOH HOH . F 4 HOH A 161 361 73 HOH HOH . F 4 HOH A 162 362 114 HOH HOH . F 4 HOH A 163 363 67 HOH HOH . F 4 HOH A 164 364 119 HOH HOH . F 4 HOH A 165 365 151 HOH HOH . F 4 HOH A 166 366 149 HOH HOH . F 4 HOH A 167 367 85 HOH HOH . F 4 HOH A 168 368 9 HOH HOH . F 4 HOH A 169 369 147 HOH HOH . F 4 HOH A 170 370 143 HOH HOH . F 4 HOH A 171 371 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BDF . . . C 2 -16.875 8.115 -7.791 1 8.15 ? C1 BDF 102 A 1 HETATM 2 C C2 BDF . . . C 2 -16.988 6.603 -7.693 1 6.68 ? C2 BDF 102 A 1 HETATM 3 C C3 BDF . . . C 2 -17.021 6.132 -6.233 1 6.3 ? C3 BDF 102 A 1 HETATM 4 C C4 BDF . . . C 2 -16.937 4.611 -6.169 1 6.46 ? C4 BDF 102 A 1 HETATM 5 C C5 BDF . . . C 2 -15.698 4.127 -6.913 1 6.47 ? C5 BDF 102 A 1 HETATM 6 C C6 BDF . . . C 2 -15.73 4.657 -8.332 1 7.39 ? C6 BDF 102 A 1 HETATM 7 O O1 BDF . . . C 2 -17.032 8.543 -9.133 1 14.96 ? O1 BDF 102 A 1 HETATM 8 O O2 BDF . . . C 2 -18.148 6.137 -8.329 1 8.06 ? O2 BDF 102 A 1 HETATM 9 O O3 BDF . . . C 2 -18.203 6.594 -5.586 1 6.8 ? O3 BDF 102 A 1 HETATM 10 O O4 BDF . . . C 2 -16.966 4.184 -4.809 1 6.66 ? O4 BDF 102 A 1 HETATM 11 O O5 BDF . . . C 2 -14.495 4.592 -6.3 1 5.68 ? O5 BDF 102 A 1 HETATM 12 O O6 BDF . . . C 2 -15.825 6.089 -8.337 1 6.45 ? O6 BDF 102 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #