data_9HRZ # _model_server_result.job_id '_DOuHtDPiEdiAfrWQ4EX2g' _model_server_result.datetime_utc '2025-08-21 17:05:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9hrz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 9HRZ # _exptl.entry_id 9HRZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-fructopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9HRZ _cell.length_a 43.569 _cell.length_b 43.569 _cell.length_c 122.997 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HRZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BDF _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BDF sing 145 n n C1 O1 BDF sing 146 n n C1 H11 BDF sing 147 n n C1 H12 BDF sing 148 n n C2 C3 BDF sing 149 n n C2 O2 BDF sing 150 n n C2 O6 BDF sing 151 n n C3 C4 BDF sing 152 n n C3 O3 BDF sing 153 n n C3 H3 BDF sing 154 n n C4 C5 BDF sing 155 n n C4 O4 BDF sing 156 n n C4 H4 BDF sing 157 n n C5 C6 BDF sing 158 n n C5 O5 BDF sing 159 n n C5 H5 BDF sing 160 n n C6 O6 BDF sing 161 n n C6 H61 BDF sing 162 n n C6 H62 BDF sing 163 n n O1 HO1 BDF sing 164 n n O2 HO2 BDF sing 165 n n O3 HO3 BDF sing 166 n n O4 HO4 BDF sing 167 n n O5 HO5 BDF sing 168 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BDF DFrupb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BDF b-D-fructopyranose 'COMMON NAME' GMML 1 BDF b-D-Frup 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BDF Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 9HRZ _atom_sites.fract_transf_matrix[1][1] 0.022952 _atom_sites.fract_transf_matrix[1][2] 0.013251 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00813 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BDF A 1 101 101 BDF BDF . C 2 BDF A 1 102 102 BDF BDF . D 3 A1IXG A 1 103 103 A1IXG PCT . E 3 A1IXG A 1 104 104 A1IXG PCT . F 4 HOH A 1 201 108 HOH HOH . F 4 HOH A 2 202 190 HOH HOH . F 4 HOH A 3 203 3 HOH HOH . F 4 HOH A 4 204 4 HOH HOH . F 4 HOH A 5 205 21 HOH HOH . F 4 HOH A 6 206 11 HOH HOH . F 4 HOH A 7 207 9 HOH HOH . F 4 HOH A 8 208 181 HOH HOH . F 4 HOH A 9 209 28 HOH HOH . F 4 HOH A 10 210 59 HOH HOH . F 4 HOH A 11 211 69 HOH HOH . F 4 HOH A 12 212 63 HOH HOH . F 4 HOH A 13 213 19 HOH HOH . F 4 HOH A 14 214 51 HOH HOH . F 4 HOH A 15 215 38 HOH HOH . F 4 HOH A 16 216 66 HOH HOH . F 4 HOH A 17 217 7 HOH HOH . F 4 HOH A 18 218 2 HOH HOH . F 4 HOH A 19 219 180 HOH HOH . F 4 HOH A 20 220 95 HOH HOH . F 4 HOH A 21 221 102 HOH HOH . F 4 HOH A 22 222 10 HOH HOH . F 4 HOH A 23 223 6 HOH HOH . F 4 HOH A 24 224 103 HOH HOH . F 4 HOH A 25 225 57 HOH HOH . F 4 HOH A 26 226 30 HOH HOH . F 4 HOH A 27 227 27 HOH HOH . F 4 HOH A 28 228 22 HOH HOH . F 4 HOH A 29 229 52 HOH HOH . F 4 HOH A 30 230 20 HOH HOH . F 4 HOH A 31 231 24 HOH HOH . F 4 HOH A 32 232 37 HOH HOH . F 4 HOH A 33 233 29 HOH HOH . F 4 HOH A 34 234 36 HOH HOH . F 4 HOH A 35 235 185 HOH HOH . F 4 HOH A 36 236 31 HOH HOH . F 4 HOH A 37 237 176 HOH HOH . F 4 HOH A 38 238 15 HOH HOH . F 4 HOH A 39 239 5 HOH HOH . F 4 HOH A 40 240 124 HOH HOH . F 4 HOH A 41 241 123 HOH HOH . F 4 HOH A 42 242 135 HOH HOH . F 4 HOH A 43 243 72 HOH HOH . F 4 HOH A 44 244 32 HOH HOH . F 4 HOH A 45 245 48 HOH HOH . F 4 HOH A 46 246 62 HOH HOH . F 4 HOH A 47 247 188 HOH HOH . F 4 HOH A 48 248 39 HOH HOH . F 4 HOH A 49 249 175 HOH HOH . F 4 HOH A 50 250 74 HOH HOH . F 4 HOH A 51 251 12 HOH HOH . F 4 HOH A 52 252 23 HOH HOH . F 4 HOH A 53 253 49 HOH HOH . F 4 HOH A 54 254 14 HOH HOH . F 4 HOH A 55 255 45 HOH HOH . F 4 HOH A 56 256 148 HOH HOH . F 4 HOH A 57 257 118 HOH HOH . F 4 HOH A 58 258 26 HOH HOH . F 4 HOH A 59 259 182 HOH HOH . F 4 HOH A 60 260 192 HOH HOH . F 4 HOH A 61 261 76 HOH HOH . F 4 HOH A 62 262 104 HOH HOH . F 4 HOH A 63 263 64 HOH HOH . F 4 HOH A 64 264 8 HOH HOH . F 4 HOH A 65 265 41 HOH HOH . F 4 HOH A 66 266 42 HOH HOH . F 4 HOH A 67 267 186 HOH HOH . F 4 HOH A 68 268 174 HOH HOH . F 4 HOH A 69 269 73 HOH HOH . F 4 HOH A 70 270 97 HOH HOH . F 4 HOH A 71 271 132 HOH HOH . F 4 HOH A 72 272 56 HOH HOH . F 4 HOH A 73 273 18 HOH HOH . F 4 HOH A 74 274 40 HOH HOH . F 4 HOH A 75 275 35 HOH HOH . F 4 HOH A 76 276 75 HOH HOH . F 4 HOH A 77 277 178 HOH HOH . F 4 HOH A 78 278 78 HOH HOH . F 4 HOH A 79 279 86 HOH HOH . F 4 HOH A 80 280 1 HOH HOH . F 4 HOH A 81 281 55 HOH HOH . F 4 HOH A 82 282 90 HOH HOH . F 4 HOH A 83 283 137 HOH HOH . F 4 HOH A 84 284 99 HOH HOH . F 4 HOH A 85 285 120 HOH HOH . F 4 HOH A 86 286 61 HOH HOH . F 4 HOH A 87 287 193 HOH HOH . F 4 HOH A 88 288 100 HOH HOH . F 4 HOH A 89 289 189 HOH HOH . F 4 HOH A 90 290 13 HOH HOH . F 4 HOH A 91 291 101 HOH HOH . F 4 HOH A 92 292 98 HOH HOH . F 4 HOH A 93 293 187 HOH HOH . F 4 HOH A 94 294 161 HOH HOH . F 4 HOH A 95 295 184 HOH HOH . F 4 HOH A 96 296 84 HOH HOH . F 4 HOH A 97 297 177 HOH HOH . F 4 HOH A 98 298 191 HOH HOH . F 4 HOH A 99 299 81 HOH HOH . F 4 HOH A 100 300 33 HOH HOH . F 4 HOH A 101 301 34 HOH HOH . F 4 HOH A 102 302 60 HOH HOH . F 4 HOH A 103 303 153 HOH HOH . F 4 HOH A 104 304 17 HOH HOH . F 4 HOH A 105 305 183 HOH HOH . F 4 HOH A 106 306 116 HOH HOH . F 4 HOH A 107 307 85 HOH HOH . F 4 HOH A 108 308 43 HOH HOH . F 4 HOH A 109 309 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BDF . . . C 2 18.627 -2.271 -7.717 1 16.31 ? C1 BDF 102 A 1 HETATM 2 C C2 BDF . . . C 2 18.215 -0.813 -7.595 1 8.83 ? C2 BDF 102 A 1 HETATM 3 C C3 BDF . . . C 2 18.029 -0.424 -6.126 1 9.52 ? C3 BDF 102 A 1 HETATM 4 C C4 BDF . . . C 2 17.452 0.984 -6.044 1 6.4 ? C4 BDF 102 A 1 HETATM 5 C C5 BDF . . . C 2 16.15 1.054 -6.826 1 8.3 ? C5 BDF 102 A 1 HETATM 6 C C6 BDF . . . C 2 16.411 0.63 -8.255 1 9.61 ? C6 BDF 102 A 1 HETATM 7 O O1 BDF . . . C 2 19.013 -2.61 -9.041 1 17.37 ? O1 BDF 102 A 1 HETATM 8 O O2 BDF . . . C 2 19.171 0.059 -8.142 1 10.94 ? O2 BDF 102 A 1 HETATM 9 O O3 BDF . . . C 2 19.27 -0.492 -5.44 1 10.41 ? O3 BDF 102 A 1 HETATM 10 O O4 BDF . . . C 2 17.254 1.318 -4.677 1 9.1 ? O4 BDF 102 A 1 HETATM 11 O O5 BDF . . . C 2 15.22 0.124 -6.267 1 10.1 ? O5 BDF 102 A 1 HETATM 12 O O6 BDF . . . C 2 16.975 -0.688 -8.282 1 11.25 ? O6 BDF 102 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #