data_9HSJ # _model_server_result.job_id 9qp7aF9-1VOVenjoXo1dGw _model_server_result.datetime_utc '2025-03-23 14:18:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9hsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 9HSJ # _exptl.entry_id 9HSJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 101.147 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{R})-piperidin-3-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9HSJ _cell.length_a 50.392 _cell.length_b 69.051 _cell.length_c 118.892 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -69.051 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C5 H11 N O' _chem_comp.formula_weight 101.147 _chem_comp.id A1IWV _chem_comp.mon_nstd_flag . _chem_comp.name (3~{R})-piperidin-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 O01 A1IWV sing 1 n n C03 C02 A1IWV sing 2 n n C04 C03 A1IWV sing 3 n n C05 C04 A1IWV sing 4 n n N06 C05 A1IWV sing 5 n n C07 N06 A1IWV sing 6 n n C02 C07 A1IWV sing 7 n n C02 H021 A1IWV sing 8 n n C03 H031 A1IWV sing 9 n n C03 H032 A1IWV sing 10 n n C04 H041 A1IWV sing 11 n n C04 H042 A1IWV sing 12 n n C05 H051 A1IWV sing 13 n n C05 H052 A1IWV sing 14 n n C07 H071 A1IWV sing 15 n n C07 H072 A1IWV sing 16 n n N06 H061 A1IWV sing 17 n n O01 H011 A1IWV sing 18 n n # _atom_sites.entry_id 9HSJ _atom_sites.fract_transf_matrix[1][1] 0.019844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014482 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008411 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1IWV A 1 801 819 A1IWV LIG . C 2 A1IWV A 1 802 820 A1IWV LIG . D 3 HOH A 1 901 11 HOH HOH . D 3 HOH A 2 902 123 HOH HOH . D 3 HOH A 3 903 124 HOH HOH . D 3 HOH A 4 904 115 HOH HOH . D 3 HOH A 5 905 20 HOH HOH . D 3 HOH A 6 906 41 HOH HOH . D 3 HOH A 7 907 94 HOH HOH . D 3 HOH A 8 908 42 HOH HOH . D 3 HOH A 9 909 52 HOH HOH . D 3 HOH A 10 910 92 HOH HOH . D 3 HOH A 11 911 138 HOH HOH . D 3 HOH A 12 912 155 HOH HOH . D 3 HOH A 13 913 53 HOH HOH . D 3 HOH A 14 914 57 HOH HOH . D 3 HOH A 15 915 55 HOH HOH . D 3 HOH A 16 916 19 HOH HOH . D 3 HOH A 17 917 146 HOH HOH . D 3 HOH A 18 918 89 HOH HOH . D 3 HOH A 19 919 101 HOH HOH . D 3 HOH A 20 920 85 HOH HOH . D 3 HOH A 21 921 27 HOH HOH . D 3 HOH A 22 922 29 HOH HOH . D 3 HOH A 23 923 86 HOH HOH . D 3 HOH A 24 924 14 HOH HOH . D 3 HOH A 25 925 113 HOH HOH . D 3 HOH A 26 926 58 HOH HOH . D 3 HOH A 27 927 3 HOH HOH . D 3 HOH A 28 928 46 HOH HOH . D 3 HOH A 29 929 67 HOH HOH . D 3 HOH A 30 930 37 HOH HOH . D 3 HOH A 31 931 79 HOH HOH . D 3 HOH A 32 932 117 HOH HOH . D 3 HOH A 33 933 7 HOH HOH . D 3 HOH A 34 934 91 HOH HOH . D 3 HOH A 35 935 74 HOH HOH . D 3 HOH A 36 936 129 HOH HOH . D 3 HOH A 37 937 9 HOH HOH . D 3 HOH A 38 938 4 HOH HOH . D 3 HOH A 39 939 140 HOH HOH . D 3 HOH A 40 940 35 HOH HOH . D 3 HOH A 41 941 38 HOH HOH . D 3 HOH A 42 942 36 HOH HOH . D 3 HOH A 43 943 30 HOH HOH . D 3 HOH A 44 944 1 HOH HOH . D 3 HOH A 45 945 25 HOH HOH . D 3 HOH A 46 946 148 HOH HOH . D 3 HOH A 47 947 48 HOH HOH . D 3 HOH A 48 948 145 HOH HOH . D 3 HOH A 49 949 77 HOH HOH . D 3 HOH A 50 950 10 HOH HOH . D 3 HOH A 51 951 28 HOH HOH . D 3 HOH A 52 952 13 HOH HOH . D 3 HOH A 53 953 2 HOH HOH . D 3 HOH A 54 954 64 HOH HOH . D 3 HOH A 55 955 118 HOH HOH . D 3 HOH A 56 956 33 HOH HOH . D 3 HOH A 57 957 45 HOH HOH . D 3 HOH A 58 958 127 HOH HOH . D 3 HOH A 59 959 44 HOH HOH . D 3 HOH A 60 960 15 HOH HOH . D 3 HOH A 61 961 54 HOH HOH . D 3 HOH A 62 962 69 HOH HOH . D 3 HOH A 63 963 5 HOH HOH . D 3 HOH A 64 964 112 HOH HOH . D 3 HOH A 65 965 6 HOH HOH . D 3 HOH A 66 966 17 HOH HOH . D 3 HOH A 67 967 88 HOH HOH . D 3 HOH A 68 968 51 HOH HOH . D 3 HOH A 69 969 110 HOH HOH . D 3 HOH A 70 970 8 HOH HOH . D 3 HOH A 71 971 34 HOH HOH . D 3 HOH A 72 972 137 HOH HOH . D 3 HOH A 73 973 31 HOH HOH . D 3 HOH A 74 974 132 HOH HOH . D 3 HOH A 75 975 80 HOH HOH . D 3 HOH A 76 976 18 HOH HOH . D 3 HOH A 77 977 32 HOH HOH . D 3 HOH A 78 978 81 HOH HOH . D 3 HOH A 79 979 102 HOH HOH . D 3 HOH A 80 980 111 HOH HOH . D 3 HOH A 81 981 22 HOH HOH . D 3 HOH A 82 982 47 HOH HOH . D 3 HOH A 83 983 96 HOH HOH . D 3 HOH A 84 984 49 HOH HOH . D 3 HOH A 85 985 109 HOH HOH . D 3 HOH A 86 986 16 HOH HOH . D 3 HOH A 87 987 93 HOH HOH . D 3 HOH A 88 988 149 HOH HOH . D 3 HOH A 89 989 50 HOH HOH . D 3 HOH A 90 990 95 HOH HOH . D 3 HOH A 91 991 73 HOH HOH . D 3 HOH A 92 992 66 HOH HOH . D 3 HOH A 93 993 75 HOH HOH . D 3 HOH A 94 994 99 HOH HOH . D 3 HOH A 95 995 21 HOH HOH . D 3 HOH A 96 996 70 HOH HOH . D 3 HOH A 97 997 24 HOH HOH . D 3 HOH A 98 998 121 HOH HOH . D 3 HOH A 99 999 65 HOH HOH . D 3 HOH A 100 1000 12 HOH HOH . D 3 HOH A 101 1001 40 HOH HOH . D 3 HOH A 102 1002 39 HOH HOH . D 3 HOH A 103 1003 105 HOH HOH . D 3 HOH A 104 1004 97 HOH HOH . D 3 HOH A 105 1005 104 HOH HOH . D 3 HOH A 106 1006 87 HOH HOH . D 3 HOH A 107 1007 130 HOH HOH . D 3 HOH A 108 1008 120 HOH HOH . D 3 HOH A 109 1009 126 HOH HOH . D 3 HOH A 110 1010 23 HOH HOH . D 3 HOH A 111 1011 147 HOH HOH . D 3 HOH A 112 1012 106 HOH HOH . D 3 HOH A 113 1013 152 HOH HOH . D 3 HOH A 114 1014 56 HOH HOH . D 3 HOH A 115 1015 125 HOH HOH . D 3 HOH A 116 1016 133 HOH HOH . D 3 HOH A 117 1017 108 HOH HOH . D 3 HOH A 118 1018 26 HOH HOH . D 3 HOH A 119 1019 60 HOH HOH . D 3 HOH A 120 1020 103 HOH HOH . D 3 HOH A 121 1021 128 HOH HOH . D 3 HOH A 122 1022 151 HOH HOH . D 3 HOH A 123 1023 61 HOH HOH . D 3 HOH A 124 1024 82 HOH HOH . D 3 HOH A 125 1025 78 HOH HOH . D 3 HOH A 126 1026 116 HOH HOH . D 3 HOH A 127 1027 100 HOH HOH . D 3 HOH A 128 1028 141 HOH HOH . D 3 HOH A 129 1029 84 HOH HOH . D 3 HOH A 130 1030 72 HOH HOH . D 3 HOH A 131 1031 43 HOH HOH . D 3 HOH A 132 1032 134 HOH HOH . D 3 HOH A 133 1033 153 HOH HOH . D 3 HOH A 134 1034 59 HOH HOH . D 3 HOH A 135 1035 63 HOH HOH . D 3 HOH A 136 1036 71 HOH HOH . D 3 HOH A 137 1037 90 HOH HOH . D 3 HOH A 138 1038 135 HOH HOH . D 3 HOH A 139 1039 122 HOH HOH . D 3 HOH A 140 1040 131 HOH HOH . D 3 HOH A 141 1041 76 HOH HOH . D 3 HOH A 142 1042 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 A1IWV . . . C 2 -13.97 -14.568 -37.977 1 44.75 ? C02 A1IWV 802 A 1 HETATM 2 C C03 A1IWV . . . C 2 -13.802 -14.566 -36.468 1 37.12 ? C03 A1IWV 802 A 1 HETATM 3 C C04 A1IWV . . . C 2 -15.021 -14.039 -35.731 1 37.5 ? C04 A1IWV 802 A 1 HETATM 4 C C05 A1IWV . . . C 2 -16.308 -14.606 -36.216 1 34.59 ? C05 A1IWV 802 A 1 HETATM 5 C C07 A1IWV . . . C 2 -15.272 -13.885 -38.369 1 40.24 ? C07 A1IWV 802 A 1 HETATM 6 N N06 A1IWV . . . C 2 -16.456 -14.59 -37.743 1 38.28 ? N06 A1IWV 802 A 1 HETATM 7 O O01 A1IWV . . . C 2 -13.978 -15.903 -38.448 1 46.8 ? O01 A1IWV 802 A 1 HETATM 8 H H021 A1IWV . . . C 2 -13.117 -13.998 -38.429 1 53.65 ? H021 A1IWV 802 A 1 HETATM 9 H H031 A1IWV . . . C 2 -12.906 -13.969 -36.21 1 44.5 ? H031 A1IWV 802 A 1 HETATM 10 H H032 A1IWV . . . C 2 -13.564 -15.596 -36.135 1 44.5 ? H032 A1IWV 802 A 1 HETATM 11 H H041 A1IWV . . . C 2 -15.061 -12.932 -35.81 1 44.96 ? H041 A1IWV 802 A 1 HETATM 12 H H042 A1IWV . . . C 2 -14.923 -14.243 -34.643 1 44.96 ? H042 A1IWV 802 A 1 HETATM 13 H H051 A1IWV . . . C 2 -16.39 -15.642 -35.804 1 41.46 ? H051 A1IWV 802 A 1 HETATM 14 H H052 A1IWV . . . C 2 -17.13 -14.036 -35.716 1 41.46 ? H052 A1IWV 802 A 1 HETATM 15 H H071 A1IWV . . . C 2 -15.188 -12.811 -38.064 1 48.24 ? H071 A1IWV 802 A 1 HETATM 16 H H072 A1IWV . . . C 2 -15.312 -13.865 -39.487 1 48.24 ? H072 A1IWV 802 A 1 HETATM 17 H H061 A1IWV . . . C 2 -16.546 -15.543 -38.113 1 45.89 ? H061 A1IWV 802 A 1 HETATM 18 H H011 A1IWV . . . C 2 -14.515 -16.4 -37.849 1 56.11 ? H011 A1IWV 802 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 18 #