data_9HSX # _model_server_result.job_id Sa5xlAVKCrc54RjNm8lAxQ _model_server_result.datetime_utc '2025-06-21 12:39:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9hsx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 9HSX # _exptl.entry_id 9HSX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.115 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description pyridin-2-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9HSX _cell.length_a 50.354 _cell.length_b 70.945 _cell.length_c 119.638 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HSX _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -70.945 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C5 H6 N2' _chem_comp.formula_weight 94.115 _chem_comp.id HVK _chem_comp.mon_nstd_flag . _chem_comp.name pyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C6 HVK doub 152 n y N1 C2 HVK sing 153 n y C6 C5 HVK sing 154 n y N C2 HVK sing 155 n n C2 C3 HVK doub 156 n y C5 C4 HVK doub 157 n y C4 C3 HVK sing 158 n y C3 H3 HVK sing 159 n n C4 H4 HVK sing 160 n n C5 H5 HVK sing 161 n n C6 H6 HVK sing 162 n n N HN2 HVK sing 163 n n N HN1A HVK sing 164 n n # _atom_sites.entry_id 9HSX _atom_sites.fract_transf_matrix[1][1] 0.019859 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014095 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HVK A 1 801 7 HVK LIG . C 2 HVK A 1 802 10 HVK LIG . D 3 HOH A 1 901 19 HOH HOH . D 3 HOH A 2 902 1 HOH HOH . D 3 HOH A 3 903 16 HOH HOH . D 3 HOH A 4 904 4 HOH HOH . D 3 HOH A 5 905 5 HOH HOH . D 3 HOH A 6 906 2 HOH HOH . D 3 HOH A 7 907 6 HOH HOH . D 3 HOH A 8 908 29 HOH HOH . D 3 HOH A 9 909 33 HOH HOH . D 3 HOH A 10 910 27 HOH HOH . D 3 HOH A 11 911 10 HOH HOH . D 3 HOH A 12 912 21 HOH HOH . D 3 HOH A 13 913 13 HOH HOH . D 3 HOH A 14 914 30 HOH HOH . D 3 HOH A 15 915 11 HOH HOH . D 3 HOH A 16 916 9 HOH HOH . D 3 HOH A 17 917 18 HOH HOH . D 3 HOH A 18 918 24 HOH HOH . D 3 HOH A 19 919 3 HOH HOH . D 3 HOH A 20 920 7 HOH HOH . D 3 HOH A 21 921 14 HOH HOH . D 3 HOH A 22 922 34 HOH HOH . D 3 HOH A 23 923 8 HOH HOH . D 3 HOH A 24 924 25 HOH HOH . D 3 HOH A 25 925 12 HOH HOH . D 3 HOH A 26 926 26 HOH HOH . D 3 HOH A 27 927 32 HOH HOH . D 3 HOH A 28 928 23 HOH HOH . D 3 HOH A 29 929 17 HOH HOH . D 3 HOH A 30 930 28 HOH HOH . D 3 HOH A 31 931 15 HOH HOH . D 3 HOH A 32 932 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 HVK . . . C 2 -10.457 -28.886 -15.627 1 71.78 ? N1 HVK 802 A 1 HETATM 2 C C2 HVK . . . C 2 -10.442 -28.756 -14.27 1 79.62 ? C2 HVK 802 A 1 HETATM 3 C C3 HVK . . . C 2 -9.655 -27.81 -13.598 1 74.26 ? C3 HVK 802 A 1 HETATM 4 C C4 HVK . . . C 2 -8.848 -26.959 -14.337 1 76.03 ? C4 HVK 802 A 1 HETATM 5 C C5 HVK . . . C 2 -8.838 -27.068 -15.722 1 73.48 ? C5 HVK 802 A 1 HETATM 6 C C6 HVK . . . C 2 -9.656 -28.04 -16.318 1 73.32 ? C6 HVK 802 A 1 HETATM 7 N N HVK . . . C 2 -11.239 -29.599 -13.432 1 91.51 ? N HVK 802 A 1 HETATM 8 H H3 HVK . . . C 2 -9.688 -27.756 -12.5 1 89.19 ? H3 HVK 802 A 1 HETATM 9 H H4 HVK . . . C 2 -8.232 -26.216 -13.827 1 91.32 ? H4 HVK 802 A 1 HETATM 10 H H5 HVK . . . C 2 -8.209 -26.411 -16.328 1 88.26 ? H5 HVK 802 A 1 HETATM 11 H H6 HVK . . . C 2 -9.676 -28.154 -17.417 1 88.06 ? H6 HVK 802 A 1 HETATM 12 H HN2 HVK . . . C 2 -10.946 -29.935 -12.518 1 109.9 ? HN2 HVK 802 A 1 HETATM 13 H HN1A HVK . . . C 2 -12.138 -29.853 -13.808 1 109.9 ? HN1A HVK 802 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #