data_9HT4 # _model_server_result.job_id eyKZdHvUMJZ8n9Pjah8RjA _model_server_result.datetime_utc '2025-02-05 20:04:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ht4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 9HT4 # _exptl.entry_id 9HT4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.088 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SUCCINIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9HT4 _cell.length_a 33.957 _cell.length_b 118.525 _cell.length_c 167.21 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9HT4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C4 H6 O4' _chem_comp.formula_weight 118.088 _chem_comp.id SIN _chem_comp.mon_nstd_flag . _chem_comp.name 'SUCCINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 SIN doub 277 n n C1 O2 SIN sing 278 n n C1 C2 SIN sing 279 n n O2 HO2 SIN sing 280 n n C2 C3 SIN sing 281 n n C2 H21 SIN sing 282 n n C2 H22 SIN sing 283 n n C3 C4 SIN sing 284 n n C3 H31 SIN sing 285 n n C3 H32 SIN sing 286 n n C4 O3 SIN doub 287 n n C4 O4 SIN sing 288 n n O4 HO4 SIN sing 289 n n # _atom_sites.entry_id 9HT4 _atom_sites.fract_transf_matrix[1][1] 0.029449 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008437 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005981 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SIN A 1 401 401 SIN SIN . D 2 SIN B 1 401 401 SIN SIN . E 3 HOH A 1 501 207 HOH HOH . E 3 HOH A 2 502 181 HOH HOH . E 3 HOH A 3 503 259 HOH HOH . E 3 HOH A 4 504 39 HOH HOH . E 3 HOH A 5 505 245 HOH HOH . E 3 HOH A 6 506 123 HOH HOH . E 3 HOH A 7 507 120 HOH HOH . E 3 HOH A 8 508 225 HOH HOH . E 3 HOH A 9 509 228 HOH HOH . E 3 HOH A 10 510 128 HOH HOH . E 3 HOH A 11 511 223 HOH HOH . E 3 HOH A 12 512 28 HOH HOH . E 3 HOH A 13 513 54 HOH HOH . E 3 HOH A 14 514 327 HOH HOH . E 3 HOH A 15 515 81 HOH HOH . E 3 HOH A 16 516 143 HOH HOH . E 3 HOH A 17 517 175 HOH HOH . E 3 HOH A 18 518 208 HOH HOH . E 3 HOH A 19 519 147 HOH HOH . E 3 HOH A 20 520 192 HOH HOH . E 3 HOH A 21 521 304 HOH HOH . E 3 HOH A 22 522 290 HOH HOH . E 3 HOH A 23 523 227 HOH HOH . E 3 HOH A 24 524 184 HOH HOH . E 3 HOH A 25 525 72 HOH HOH . E 3 HOH A 26 526 306 HOH HOH . E 3 HOH A 27 527 68 HOH HOH . E 3 HOH A 28 528 129 HOH HOH . E 3 HOH A 29 529 201 HOH HOH . E 3 HOH A 30 530 164 HOH HOH . E 3 HOH A 31 531 233 HOH HOH . E 3 HOH A 32 532 253 HOH HOH . E 3 HOH A 33 533 18 HOH HOH . E 3 HOH A 34 534 273 HOH HOH . E 3 HOH A 35 535 261 HOH HOH . E 3 HOH A 36 536 33 HOH HOH . E 3 HOH A 37 537 249 HOH HOH . E 3 HOH A 38 538 3 HOH HOH . E 3 HOH A 39 539 98 HOH HOH . E 3 HOH A 40 540 330 HOH HOH . E 3 HOH A 41 541 53 HOH HOH . E 3 HOH A 42 542 23 HOH HOH . E 3 HOH A 43 543 248 HOH HOH . E 3 HOH A 44 544 301 HOH HOH . E 3 HOH A 45 545 9 HOH HOH . E 3 HOH A 46 546 96 HOH HOH . E 3 HOH A 47 547 25 HOH HOH . E 3 HOH A 48 548 115 HOH HOH . E 3 HOH A 49 549 133 HOH HOH . E 3 HOH A 50 550 60 HOH HOH . E 3 HOH A 51 551 220 HOH HOH . E 3 HOH A 52 552 108 HOH HOH . E 3 HOH A 53 553 27 HOH HOH . E 3 HOH A 54 554 234 HOH HOH . E 3 HOH A 55 555 135 HOH HOH . E 3 HOH A 56 556 94 HOH HOH . E 3 HOH A 57 557 17 HOH HOH . E 3 HOH A 58 558 167 HOH HOH . E 3 HOH A 59 559 63 HOH HOH . E 3 HOH A 60 560 264 HOH HOH . E 3 HOH A 61 561 283 HOH HOH . E 3 HOH A 62 562 191 HOH HOH . E 3 HOH A 63 563 82 HOH HOH . E 3 HOH A 64 564 70 HOH HOH . E 3 HOH A 65 565 203 HOH HOH . E 3 HOH A 66 566 111 HOH HOH . E 3 HOH A 67 567 212 HOH HOH . E 3 HOH A 68 568 8 HOH HOH . E 3 HOH A 69 569 162 HOH HOH . E 3 HOH A 70 570 182 HOH HOH . E 3 HOH A 71 571 242 HOH HOH . E 3 HOH A 72 572 77 HOH HOH . E 3 HOH A 73 573 206 HOH HOH . E 3 HOH A 74 574 36 HOH HOH . E 3 HOH A 75 575 41 HOH HOH . E 3 HOH A 76 576 204 HOH HOH . E 3 HOH A 77 577 278 HOH HOH . E 3 HOH A 78 578 84 HOH HOH . E 3 HOH A 79 579 190 HOH HOH . E 3 HOH A 80 580 130 HOH HOH . E 3 HOH A 81 581 26 HOH HOH . E 3 HOH A 82 582 76 HOH HOH . E 3 HOH A 83 583 235 HOH HOH . E 3 HOH A 84 584 91 HOH HOH . E 3 HOH A 85 585 186 HOH HOH . E 3 HOH A 86 586 263 HOH HOH . E 3 HOH A 87 587 59 HOH HOH . E 3 HOH A 88 588 194 HOH HOH . E 3 HOH A 89 589 299 HOH HOH . E 3 HOH A 90 590 34 HOH HOH . E 3 HOH A 91 591 171 HOH HOH . E 3 HOH A 92 592 188 HOH HOH . E 3 HOH A 93 593 183 HOH HOH . E 3 HOH A 94 594 112 HOH HOH . E 3 HOH A 95 595 170 HOH HOH . E 3 HOH A 96 596 31 HOH HOH . E 3 HOH A 97 597 10 HOH HOH . E 3 HOH A 98 598 12 HOH HOH . E 3 HOH A 99 599 105 HOH HOH . E 3 HOH A 100 600 307 HOH HOH . E 3 HOH A 101 601 231 HOH HOH . E 3 HOH A 102 602 271 HOH HOH . E 3 HOH A 103 603 21 HOH HOH . E 3 HOH A 104 604 279 HOH HOH . E 3 HOH A 105 605 177 HOH HOH . E 3 HOH A 106 606 187 HOH HOH . E 3 HOH A 107 607 52 HOH HOH . E 3 HOH A 108 608 155 HOH HOH . E 3 HOH A 109 609 229 HOH HOH . E 3 HOH A 110 610 276 HOH HOH . E 3 HOH A 111 611 153 HOH HOH . E 3 HOH A 112 612 217 HOH HOH . E 3 HOH A 113 613 45 HOH HOH . E 3 HOH A 114 614 308 HOH HOH . E 3 HOH A 115 615 160 HOH HOH . E 3 HOH A 116 616 323 HOH HOH . E 3 HOH A 117 617 101 HOH HOH . E 3 HOH A 118 618 329 HOH HOH . E 3 HOH A 119 619 43 HOH HOH . E 3 HOH A 120 620 83 HOH HOH . E 3 HOH A 121 621 214 HOH HOH . E 3 HOH A 122 622 7 HOH HOH . E 3 HOH A 123 623 254 HOH HOH . E 3 HOH A 124 624 262 HOH HOH . E 3 HOH A 125 625 213 HOH HOH . E 3 HOH A 126 626 30 HOH HOH . E 3 HOH A 127 627 325 HOH HOH . E 3 HOH A 128 628 38 HOH HOH . E 3 HOH A 129 629 302 HOH HOH . E 3 HOH A 130 630 314 HOH HOH . E 3 HOH A 131 631 168 HOH HOH . E 3 HOH A 132 632 125 HOH HOH . E 3 HOH A 133 633 65 HOH HOH . E 3 HOH A 134 634 24 HOH HOH . E 3 HOH A 135 635 161 HOH HOH . E 3 HOH A 136 636 103 HOH HOH . E 3 HOH A 137 637 22 HOH HOH . E 3 HOH A 138 638 100 HOH HOH . E 3 HOH A 139 639 198 HOH HOH . E 3 HOH A 140 640 199 HOH HOH . E 3 HOH A 141 641 5 HOH HOH . E 3 HOH A 142 642 106 HOH HOH . E 3 HOH A 143 643 172 HOH HOH . E 3 HOH A 144 644 78 HOH HOH . E 3 HOH A 145 645 284 HOH HOH . E 3 HOH A 146 646 107 HOH HOH . E 3 HOH A 147 647 13 HOH HOH . E 3 HOH A 148 648 156 HOH HOH . E 3 HOH A 149 649 251 HOH HOH . E 3 HOH A 150 650 145 HOH HOH . E 3 HOH A 151 651 268 HOH HOH . E 3 HOH A 152 652 222 HOH HOH . E 3 HOH A 153 653 196 HOH HOH . E 3 HOH A 154 654 310 HOH HOH . E 3 HOH A 155 655 211 HOH HOH . E 3 HOH A 156 656 166 HOH HOH . E 3 HOH A 157 657 309 HOH HOH . E 3 HOH A 158 658 312 HOH HOH . E 3 HOH A 159 659 221 HOH HOH . E 3 HOH A 160 660 257 HOH HOH . E 3 HOH A 161 661 315 HOH HOH . E 3 HOH A 162 662 140 HOH HOH . E 3 HOH A 163 663 215 HOH HOH . E 3 HOH A 164 664 287 HOH HOH . E 3 HOH A 165 665 281 HOH HOH . E 3 HOH A 166 666 317 HOH HOH . E 3 HOH A 167 667 298 HOH HOH . E 3 HOH A 168 668 321 HOH HOH . E 3 HOH A 169 669 240 HOH HOH . E 3 HOH A 170 670 296 HOH HOH . E 3 HOH A 171 671 313 HOH HOH . E 3 HOH A 172 672 139 HOH HOH . E 3 HOH A 173 673 47 HOH HOH . F 3 HOH B 1 501 197 HOH HOH . F 3 HOH B 2 502 232 HOH HOH . F 3 HOH B 3 503 19 HOH HOH . F 3 HOH B 4 504 157 HOH HOH . F 3 HOH B 5 505 243 HOH HOH . F 3 HOH B 6 506 266 HOH HOH . F 3 HOH B 7 507 200 HOH HOH . F 3 HOH B 8 508 146 HOH HOH . F 3 HOH B 9 509 219 HOH HOH . F 3 HOH B 10 510 305 HOH HOH . F 3 HOH B 11 511 44 HOH HOH . F 3 HOH B 12 512 48 HOH HOH . F 3 HOH B 13 513 185 HOH HOH . F 3 HOH B 14 514 42 HOH HOH . F 3 HOH B 15 515 55 HOH HOH . F 3 HOH B 16 516 141 HOH HOH . F 3 HOH B 17 517 289 HOH HOH . F 3 HOH B 18 518 40 HOH HOH . F 3 HOH B 19 519 224 HOH HOH . F 3 HOH B 20 520 236 HOH HOH . F 3 HOH B 21 521 293 HOH HOH . F 3 HOH B 22 522 297 HOH HOH . F 3 HOH B 23 523 270 HOH HOH . F 3 HOH B 24 524 88 HOH HOH . F 3 HOH B 25 525 179 HOH HOH . F 3 HOH B 26 526 255 HOH HOH . F 3 HOH B 27 527 176 HOH HOH . F 3 HOH B 28 528 326 HOH HOH . F 3 HOH B 29 529 119 HOH HOH . F 3 HOH B 30 530 209 HOH HOH . F 3 HOH B 31 531 37 HOH HOH . F 3 HOH B 32 532 14 HOH HOH . F 3 HOH B 33 533 218 HOH HOH . F 3 HOH B 34 534 144 HOH HOH . F 3 HOH B 35 535 66 HOH HOH . F 3 HOH B 36 536 56 HOH HOH . F 3 HOH B 37 537 216 HOH HOH . F 3 HOH B 38 538 86 HOH HOH . F 3 HOH B 39 539 180 HOH HOH . F 3 HOH B 40 540 189 HOH HOH . F 3 HOH B 41 541 277 HOH HOH . F 3 HOH B 42 542 292 HOH HOH . F 3 HOH B 43 543 202 HOH HOH . F 3 HOH B 44 544 51 HOH HOH . F 3 HOH B 45 545 174 HOH HOH . F 3 HOH B 46 546 50 HOH HOH . F 3 HOH B 47 547 159 HOH HOH . F 3 HOH B 48 548 117 HOH HOH . F 3 HOH B 49 549 246 HOH HOH . F 3 HOH B 50 550 109 HOH HOH . F 3 HOH B 51 551 85 HOH HOH . F 3 HOH B 52 552 32 HOH HOH . F 3 HOH B 53 553 69 HOH HOH . F 3 HOH B 54 554 136 HOH HOH . F 3 HOH B 55 555 260 HOH HOH . F 3 HOH B 56 556 124 HOH HOH . F 3 HOH B 57 557 158 HOH HOH . F 3 HOH B 58 558 252 HOH HOH . F 3 HOH B 59 559 104 HOH HOH . F 3 HOH B 60 560 20 HOH HOH . F 3 HOH B 61 561 122 HOH HOH . F 3 HOH B 62 562 272 HOH HOH . F 3 HOH B 63 563 113 HOH HOH . F 3 HOH B 64 564 92 HOH HOH . F 3 HOH B 65 565 169 HOH HOH . F 3 HOH B 66 566 280 HOH HOH . F 3 HOH B 67 567 178 HOH HOH . F 3 HOH B 68 568 4 HOH HOH . F 3 HOH B 69 569 286 HOH HOH . F 3 HOH B 70 570 93 HOH HOH . F 3 HOH B 71 571 89 HOH HOH . F 3 HOH B 72 572 324 HOH HOH . F 3 HOH B 73 573 151 HOH HOH . F 3 HOH B 74 574 300 HOH HOH . F 3 HOH B 75 575 288 HOH HOH . F 3 HOH B 76 576 99 HOH HOH . F 3 HOH B 77 577 90 HOH HOH . F 3 HOH B 78 578 58 HOH HOH . F 3 HOH B 79 579 126 HOH HOH . F 3 HOH B 80 580 195 HOH HOH . F 3 HOH B 81 581 29 HOH HOH . F 3 HOH B 82 582 49 HOH HOH . F 3 HOH B 83 583 149 HOH HOH . F 3 HOH B 84 584 154 HOH HOH . F 3 HOH B 85 585 256 HOH HOH . F 3 HOH B 86 586 131 HOH HOH . F 3 HOH B 87 587 132 HOH HOH . F 3 HOH B 88 588 87 HOH HOH . F 3 HOH B 89 589 116 HOH HOH . F 3 HOH B 90 590 16 HOH HOH . F 3 HOH B 91 591 163 HOH HOH . F 3 HOH B 92 592 142 HOH HOH . F 3 HOH B 93 593 15 HOH HOH . F 3 HOH B 94 594 11 HOH HOH . F 3 HOH B 95 595 311 HOH HOH . F 3 HOH B 96 596 75 HOH HOH . F 3 HOH B 97 597 64 HOH HOH . F 3 HOH B 98 598 150 HOH HOH . F 3 HOH B 99 599 95 HOH HOH . F 3 HOH B 100 600 74 HOH HOH . F 3 HOH B 101 601 127 HOH HOH . F 3 HOH B 102 602 57 HOH HOH . F 3 HOH B 103 603 238 HOH HOH . F 3 HOH B 104 604 237 HOH HOH . F 3 HOH B 105 605 148 HOH HOH . F 3 HOH B 106 606 61 HOH HOH . F 3 HOH B 107 607 294 HOH HOH . F 3 HOH B 108 608 247 HOH HOH . F 3 HOH B 109 609 274 HOH HOH . F 3 HOH B 110 610 73 HOH HOH . F 3 HOH B 111 611 35 HOH HOH . F 3 HOH B 112 612 67 HOH HOH . F 3 HOH B 113 613 269 HOH HOH . F 3 HOH B 114 614 97 HOH HOH . F 3 HOH B 115 615 165 HOH HOH . F 3 HOH B 116 616 193 HOH HOH . F 3 HOH B 117 617 118 HOH HOH . F 3 HOH B 118 618 173 HOH HOH . F 3 HOH B 119 619 137 HOH HOH . F 3 HOH B 120 620 226 HOH HOH . F 3 HOH B 121 621 62 HOH HOH . F 3 HOH B 122 622 265 HOH HOH . F 3 HOH B 123 623 6 HOH HOH . F 3 HOH B 124 624 114 HOH HOH . F 3 HOH B 125 625 80 HOH HOH . F 3 HOH B 126 626 250 HOH HOH . F 3 HOH B 127 627 285 HOH HOH . F 3 HOH B 128 628 205 HOH HOH . F 3 HOH B 129 629 267 HOH HOH . F 3 HOH B 130 630 328 HOH HOH . F 3 HOH B 131 631 134 HOH HOH . F 3 HOH B 132 632 230 HOH HOH . F 3 HOH B 133 633 319 HOH HOH . F 3 HOH B 134 634 303 HOH HOH . F 3 HOH B 135 635 316 HOH HOH . F 3 HOH B 136 636 138 HOH HOH . F 3 HOH B 137 637 239 HOH HOH . F 3 HOH B 138 638 79 HOH HOH . F 3 HOH B 139 639 320 HOH HOH . F 3 HOH B 140 640 102 HOH HOH . F 3 HOH B 141 641 244 HOH HOH . F 3 HOH B 142 642 291 HOH HOH . F 3 HOH B 143 643 241 HOH HOH . F 3 HOH B 144 644 318 HOH HOH . F 3 HOH B 145 645 295 HOH HOH . F 3 HOH B 146 646 282 HOH HOH . F 3 HOH B 147 647 322 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SIN . . . D 2 -6.271 -24.625 25.852 1 18.11 ? C1 SIN 401 B 1 HETATM 2 O O1 SIN . . . D 2 -7.414 -24.736 26.303 1 16.25 ? O1 SIN 401 B 1 HETATM 3 O O2 SIN . . . D 2 -5.818 -25.339 24.909 1 18.49 ? O2 SIN 401 B 1 HETATM 4 C C2 SIN . . . D 2 -5.326 -23.65 26.564 1 17.68 ? C2 SIN 401 B 1 HETATM 5 C C3 SIN . . . D 2 -4.928 -24.211 27.968 1 15.56 ? C3 SIN 401 B 1 HETATM 6 C C4 SIN . . . D 2 -3.987 -23.294 28.74 1 16.96 ? C4 SIN 401 B 1 HETATM 7 O O3 SIN . . . D 2 -2.75 -23.353 28.44 1 16.31 ? O3 SIN 401 B 1 HETATM 8 O O4 SIN . . . D 2 -4.466 -22.562 29.643 1 15.14 ? O4 SIN 401 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #