data_9I7S
#
_model_server_result.job_id            69sxyc7Tu4Ik-JAlsDOP9Q 
_model_server_result.datetime_utc      '2025-07-16 05:04:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9i7s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":401}' 
#
_entry.id    9I7S 
#
_exptl.entry_id    9I7S 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              790.145 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9I7S 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9I7S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    12-meric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 M N N 
? 7 O N N 
? 7 P N N 
? 7 R N N 
? 7 V N N 
? 7 W N N 
? 7 X N N 
? 7 Y N N 
? 7 BA N N 
? 7 EA N N 
#
_chem_comp.formula           'C44 H88 N O8 P' 
_chem_comp.formula_weight    790.145 
_chem_comp.id                PC1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLCHOLINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O12 P PC1 sing 329 n n 
P O14 PC1 doub 330 n n 
P O13 PC1 sing 331 n n 
P O11 PC1 sing 332 n n 
O13 C11 PC1 sing 333 n n 
C11 C12 PC1 sing 334 n n 
C11 H111 PC1 sing 335 n n 
C11 H112 PC1 sing 336 n n 
C12 N PC1 sing 337 n n 
C12 H121 PC1 sing 338 n n 
C12 H122 PC1 sing 339 n n 
N C13 PC1 sing 340 n n 
N C14 PC1 sing 341 n n 
N C15 PC1 sing 342 n n 
C13 H131 PC1 sing 343 n n 
C13 H132 PC1 sing 344 n n 
C13 H133 PC1 sing 345 n n 
C14 H141 PC1 sing 346 n n 
C14 H142 PC1 sing 347 n n 
C14 H143 PC1 sing 348 n n 
C15 H151 PC1 sing 349 n n 
C15 H152 PC1 sing 350 n n 
C15 H153 PC1 sing 351 n n 
O11 C1 PC1 sing 352 n n 
C1 C2 PC1 sing 353 n n 
C1 H11 PC1 sing 354 n n 
C1 H12 PC1 sing 355 n n 
C2 O21 PC1 sing 356 n n 
C2 C3 PC1 sing 357 n n 
C2 H2 PC1 sing 358 n n 
O21 C21 PC1 sing 359 n n 
C21 O22 PC1 doub 360 n n 
C21 C22 PC1 sing 361 n n 
C22 C23 PC1 sing 362 n n 
C22 H221 PC1 sing 363 n n 
C22 H222 PC1 sing 364 n n 
C23 C24 PC1 sing 365 n n 
C23 H231 PC1 sing 366 n n 
C23 H232 PC1 sing 367 n n 
C24 C25 PC1 sing 368 n n 
C24 H241 PC1 sing 369 n n 
C24 H242 PC1 sing 370 n n 
C25 C26 PC1 sing 371 n n 
C25 H251 PC1 sing 372 n n 
C25 H252 PC1 sing 373 n n 
C26 C27 PC1 sing 374 n n 
C26 H261 PC1 sing 375 n n 
C26 H262 PC1 sing 376 n n 
C27 C28 PC1 sing 377 n n 
C27 H271 PC1 sing 378 n n 
C27 H272 PC1 sing 379 n n 
C28 C29 PC1 sing 380 n n 
C28 H281 PC1 sing 381 n n 
C28 H282 PC1 sing 382 n n 
C29 C2A PC1 sing 383 n n 
C29 H291 PC1 sing 384 n n 
C29 H292 PC1 sing 385 n n 
C2A C2B PC1 sing 386 n n 
C2A H2A1 PC1 sing 387 n n 
C2A H2A2 PC1 sing 388 n n 
C2B C2C PC1 sing 389 n n 
C2B H2B1 PC1 sing 390 n n 
C2B H2B2 PC1 sing 391 n n 
C2C C2D PC1 sing 392 n n 
C2C H2C1 PC1 sing 393 n n 
C2C H2C2 PC1 sing 394 n n 
C2D C2E PC1 sing 395 n n 
C2D H2D1 PC1 sing 396 n n 
C2D H2D2 PC1 sing 397 n n 
C2E C2F PC1 sing 398 n n 
C2E H2E1 PC1 sing 399 n n 
C2E H2E2 PC1 sing 400 n n 
C2F C2G PC1 sing 401 n n 
C2F H2F1 PC1 sing 402 n n 
C2F H2F2 PC1 sing 403 n n 
C2G C2H PC1 sing 404 n n 
C2G H2G1 PC1 sing 405 n n 
C2G H2G2 PC1 sing 406 n n 
C2H C2I PC1 sing 407 n n 
C2H H2H1 PC1 sing 408 n n 
C2H H2H2 PC1 sing 409 n n 
C2I H2I1 PC1 sing 410 n n 
C2I H2I2 PC1 sing 411 n n 
C2I H2I3 PC1 sing 412 n n 
C3 O31 PC1 sing 413 n n 
C3 H31 PC1 sing 414 n n 
C3 H32 PC1 sing 415 n n 
O31 C31 PC1 sing 416 n n 
C31 O32 PC1 doub 417 n n 
C31 C32 PC1 sing 418 n n 
C32 C33 PC1 sing 419 n n 
C32 H321 PC1 sing 420 n n 
C32 H322 PC1 sing 421 n n 
C33 C34 PC1 sing 422 n n 
C33 H331 PC1 sing 423 n n 
C33 H332 PC1 sing 424 n n 
C34 C35 PC1 sing 425 n n 
C34 H341 PC1 sing 426 n n 
C34 H342 PC1 sing 427 n n 
C35 C36 PC1 sing 428 n n 
C35 H351 PC1 sing 429 n n 
C35 H352 PC1 sing 430 n n 
C36 C37 PC1 sing 431 n n 
C36 H361 PC1 sing 432 n n 
C36 H362 PC1 sing 433 n n 
C37 C38 PC1 sing 434 n n 
C37 H371 PC1 sing 435 n n 
C37 H372 PC1 sing 436 n n 
C38 C39 PC1 sing 437 n n 
C38 H381 PC1 sing 438 n n 
C38 H382 PC1 sing 439 n n 
C39 C3A PC1 sing 440 n n 
C39 H391 PC1 sing 441 n n 
C39 H392 PC1 sing 442 n n 
C3A C3B PC1 sing 443 n n 
C3A H3A1 PC1 sing 444 n n 
C3A H3A2 PC1 sing 445 n n 
C3B C3C PC1 sing 446 n n 
C3B H3B1 PC1 sing 447 n n 
C3B H3B2 PC1 sing 448 n n 
C3C C3D PC1 sing 449 n n 
C3C H3C1 PC1 sing 450 n n 
C3C H3C2 PC1 sing 451 n n 
C3D C3E PC1 sing 452 n n 
C3D H3D1 PC1 sing 453 n n 
C3D H3D2 PC1 sing 454 n n 
C3E C3F PC1 sing 455 n n 
C3E H3E1 PC1 sing 456 n n 
C3E H3E2 PC1 sing 457 n n 
C3F C3G PC1 sing 458 n n 
C3F H3F1 PC1 sing 459 n n 
C3F H3F2 PC1 sing 460 n n 
C3G C3H PC1 sing 461 n n 
C3G H3G1 PC1 sing 462 n n 
C3G H3G2 PC1 sing 463 n n 
C3H C3I PC1 sing 464 n n 
C3H H3H1 PC1 sing 465 n n 
C3H H3H2 PC1 sing 466 n n 
C3I H3I1 PC1 sing 467 n n 
C3I H3I2 PC1 sing 468 n n 
C3I H3I3 PC1 sing 469 n n 
#
_atom_sites.entry_id                     9I7S 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 7 PC1 C 1 201 406 PC1 PC1 . 
N 8 DU0 C 1 202 409 DU0 DU0 . 
O 7 PC1 C 1 203 401 PC1 PC1 . 
P 7 PC1 C 1 204 403 PC1 PC1 . 
Q 8 DU0 G 1 101 404 DU0 DU0 . 
R 7 PC1 A 1 401 402 PC1 PC1 . 
S 8 DU0 A 1 402 405 DU0 DU0 . 
T 8 DU0 A 1 403 407 DU0 DU0 . 
U 9 PLC A 1 404 408 PLC PLC . 
V 7 PC1 A 1 405 410 PC1 PC1 . 
W 7 PC1 D 1 401 401 PC1 PC1 . 
X 7 PC1 D 1 402 403 PC1 PC1 . 
Y 7 PC1 D 1 403 406 PC1 PC1 . 
Z 8 DU0 D 1 404 409 DU0 DU0 . 
AA 8 DU0 H 1 101 404 DU0 DU0 . 
BA 7 PC1 B 1 401 402 PC1 PC1 . 
CA 8 DU0 B 1 402 405 DU0 DU0 . 
DA 8 DU0 B 1 403 407 DU0 DU0 . 
EA 7 PC1 B 1 404 410 PC1 PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 PC1 . . . W 7 183.9 178.797 149.799 1 92.23 ? O12 PC1 401 D 1 
HETATM 2 P P PC1 . . . W 7 183.221 179.604 150.854 1 109.68 ? P PC1 401 D 1 
HETATM 3 O O14 PC1 . . . W 7 183.958 180.27 151.966 1 89.04 ? O14 PC1 401 D 1 
HETATM 4 O O13 PC1 . . . W 7 182.36 180.819 150.14 1 97.85 ? O13 PC1 401 D 1 
HETATM 5 C C11 PC1 . . . W 7 182.48 182.132 150.632 1 91.02 ? C11 PC1 401 D 1 
HETATM 6 C C12 PC1 . . . W 7 181.611 182.963 149.7 1 91.62 ? C12 PC1 401 D 1 
HETATM 7 N N PC1 . . . W 7 181.668 184.446 149.9 1 93.79 ? N PC1 401 D 1 
HETATM 8 C C13 PC1 . . . W 7 180.845 185.139 148.876 1 91.23 ? C13 PC1 401 D 1 
HETATM 9 C C14 PC1 . . . W 7 181.106 184.753 151.246 1 88.58 ? C14 PC1 401 D 1 
HETATM 10 C C15 PC1 . . . W 7 183.068 184.947 149.832 1 89.05 ? C15 PC1 401 D 1 
HETATM 11 O O11 PC1 . . . W 7 182.025 178.629 151.43 1 95.5 ? O11 PC1 401 D 1 
HETATM 12 C C1 PC1 . . . W 7 180.881 179.145 152.083 1 88.51 ? C1 PC1 401 D 1 
HETATM 13 C C2 PC1 . . . W 7 181.185 179.479 153.53 1 90.54 ? C2 PC1 401 D 1 
HETATM 14 O O21 PC1 . . . W 7 180.767 178.424 154.399 1 94.28 ? O21 PC1 401 D 1 
HETATM 15 C C21 PC1 . . . W 7 181.654 177.882 155.227 1 92.2 ? C21 PC1 401 D 1 
HETATM 16 O O22 PC1 . . . W 7 182.791 178.268 155.309 1 88.26 ? O22 PC1 401 D 1 
HETATM 17 C C22 PC1 . . . W 7 181.082 176.728 156.003 1 90.86 ? C22 PC1 401 D 1 
HETATM 18 C C23 PC1 . . . W 7 181.128 176.892 157.512 1 90.32 ? C23 PC1 401 D 1 
HETATM 19 C C24 PC1 . . . W 7 180.276 178.053 157.998 1 85.34 ? C24 PC1 401 D 1 
HETATM 20 C C25 PC1 . . . W 7 180.329 178.261 159.506 1 87.23 ? C25 PC1 401 D 1 
HETATM 21 C C26 PC1 . . . W 7 179.998 177.014 160.313 1 88.25 ? C26 PC1 401 D 1 
HETATM 22 C C27 PC1 . . . W 7 179.666 177.319 161.767 1 86.56 ? C27 PC1 401 D 1 
HETATM 23 C C28 PC1 . . . W 7 180.726 178.168 162.448 1 86.23 ? C28 PC1 401 D 1 
HETATM 24 C C29 PC1 . . . W 7 181.993 177.412 162.808 1 87.52 ? C29 PC1 401 D 1 
HETATM 25 C C2A PC1 . . . W 7 181.777 176.423 163.939 1 85.85 ? C2A PC1 401 D 1 
HETATM 26 C C2B PC1 . . . W 7 181.231 177.095 165.187 1 86.59 ? C2B PC1 401 D 1 
HETATM 27 C C2C PC1 . . . W 7 182.212 178.047 165.85 1 84.94 ? C2C PC1 401 D 1 
HETATM 28 C C2D PC1 . . . W 7 183.287 177.344 166.662 1 84.89 ? C2D PC1 401 D 1 
HETATM 29 C C2E PC1 . . . W 7 182.716 176.518 167.801 1 84.58 ? C2E PC1 401 D 1 
HETATM 30 C C2F PC1 . . . W 7 183.791 175.856 168.651 1 89.49 ? C2F PC1 401 D 1 
HETATM 31 C C3 PC1 . . . W 7 180.432 180.714 153.961 1 90.03 ? C3 PC1 401 D 1 
HETATM 32 O O31 PC1 . . . W 7 180.467 180.791 155.38 1 92.5 ? O31 PC1 401 D 1 
HETATM 33 C C31 PC1 . . . W 7 181.496 181.417 155.931 1 93.04 ? C31 PC1 401 D 1 
HETATM 34 O O32 PC1 . . . W 7 182.346 181.965 155.281 1 94.96 ? O32 PC1 401 D 1 
HETATM 35 C C32 PC1 . . . W 7 181.455 181.382 157.43 1 88.68 ? C32 PC1 401 D 1 
HETATM 36 C C33 PC1 . . . W 7 182.668 182.068 158.025 1 87.32 ? C33 PC1 401 D 1 
HETATM 37 C C34 PC1 . . . W 7 182.586 182.275 159.526 1 87.27 ? C34 PC1 401 D 1 
HETATM 38 C C35 PC1 . . . W 7 181.359 183.053 159.97 1 84.75 ? C35 PC1 401 D 1 
HETATM 39 C C36 PC1 . . . W 7 181.461 183.446 161.434 1 87.57 ? C36 PC1 401 D 1 
HETATM 40 C C37 PC1 . . . W 7 181.952 182.319 162.33 1 85.74 ? C37 PC1 401 D 1 
HETATM 41 C C38 PC1 . . . W 7 182.033 182.744 163.787 1 83.7 ? C38 PC1 401 D 1 
HETATM 42 C C39 PC1 . . . W 7 182.696 181.723 164.692 1 82.46 ? C39 PC1 401 D 1 
HETATM 43 C C3A PC1 . . . W 7 182.677 182.16 166.146 1 85.74 ? C3A PC1 401 D 1 
HETATM 44 C C3B PC1 . . . W 7 183.548 181.301 167.043 1 86.43 ? C3B PC1 401 D 1 
HETATM 45 C C3C PC1 . . . W 7 185.031 181.471 166.758 1 86.56 ? C3C PC1 401 D 1 
HETATM 46 C C3D PC1 . . . W 7 185.531 182.889 166.988 1 85.55 ? C3D PC1 401 D 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           46 
#