data_9II5 # _model_server_result.job_id Ir0eZwvirpaNBHw17jNNDQ _model_server_result.datetime_utc '2025-06-17 00:36:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ii5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 9II5 # _exptl.entry_id 9II5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.602 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[(1-fluoranylcyclohexyl)methyl]-~{N}-methyl-4-(2-methylsulfanylphenyl)-2-methylsulfonyl-benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9II5 _cell.length_a 65.34 _cell.length_b 65.34 _cell.length_c 71.51 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9II5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall 'P 62' _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H28 F N O3 S2' _chem_comp.formula_weight 449.602 _chem_comp.id A1D9F _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[(1-fluoranylcyclohexyl)methyl]-~{N}-methyl-4-(2-methylsulfanylphenyl)-2-methylsulfonyl-benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 A1D9F doub 1 n n C1 N1 A1D9F sing 2 n n C1 C10 A1D9F sing 3 n n N1 C2 A1D9F sing 4 n n N1 C9 A1D9F sing 5 n n C2 C3 A1D9F sing 6 n n C3 F1 A1D9F sing 7 n n C3 C4 A1D9F sing 8 n n C3 C8 A1D9F sing 9 n n C4 C5 A1D9F sing 10 n n C5 C6 A1D9F sing 11 n n C6 C7 A1D9F sing 12 n n C7 C8 A1D9F sing 13 n n C10 C11 A1D9F doub 14 n y C10 C22 A1D9F sing 15 n y C11 C12 A1D9F sing 16 n y C12 C13 A1D9F doub 17 n y C13 C14 A1D9F sing 18 n n C13 C21 A1D9F sing 19 n y C14 C15 A1D9F doub 20 n y C14 C20 A1D9F sing 21 n y C15 S1 A1D9F sing 22 n n C15 C17 A1D9F sing 23 n y S1 C16 A1D9F sing 24 n n C17 C18 A1D9F doub 25 n y C18 C19 A1D9F sing 26 n y C19 C20 A1D9F doub 27 n y C21 C22 A1D9F doub 28 n y C22 S2 A1D9F sing 29 n n S2 O2 A1D9F doub 30 n n S2 C23 A1D9F sing 31 n n S2 O3 A1D9F doub 32 n n C4 H4_2 A1D9F sing 33 n n C4 H4_1 A1D9F sing 34 n n C5 H5_2 A1D9F sing 35 n n C5 H5_1 A1D9F sing 36 n n C6 H6_1 A1D9F sing 37 n n C6 H6_2 A1D9F sing 38 n n C7 H7_2 A1D9F sing 39 n n C7 H7_1 A1D9F sing 40 n n C8 H8_1 A1D9F sing 41 n n C8 H8_2 A1D9F sing 42 n n C17 HC17 A1D9F sing 43 n n C20 HC20 A1D9F sing 44 n n C21 HC21 A1D9F sing 45 n n C11 HC11 A1D9F sing 46 n n C12 HC12 A1D9F sing 47 n n C16 H163 A1D9F sing 48 n n C16 H162 A1D9F sing 49 n n C16 H161 A1D9F sing 50 n n C18 HC18 A1D9F sing 51 n n C19 HC19 A1D9F sing 52 n n C2 H2_2 A1D9F sing 53 n n C2 H2_1 A1D9F sing 54 n n C23 H232 A1D9F sing 55 n n C23 H231 A1D9F sing 56 n n C23 H233 A1D9F sing 57 n n C9 H9_1 A1D9F sing 58 n n C9 H9_2 A1D9F sing 59 n n C9 H9_3 A1D9F sing 60 n n # _atom_sites.entry_id 9II5 _atom_sites.fract_transf_matrix[1][1] 0.015305 _atom_sites.fract_transf_matrix[1][2] 0.008836 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017672 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013984 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1D9F A 1 501 1 A1D9F LIG . C 3 HOH A 1 601 83 HOH HOH . C 3 HOH A 2 602 58 HOH HOH . C 3 HOH A 3 603 47 HOH HOH . C 3 HOH A 4 604 54 HOH HOH . C 3 HOH A 5 605 36 HOH HOH . C 3 HOH A 6 606 60 HOH HOH . C 3 HOH A 7 607 82 HOH HOH . C 3 HOH A 8 608 7 HOH HOH . C 3 HOH A 9 609 23 HOH HOH . C 3 HOH A 10 610 81 HOH HOH . C 3 HOH A 11 611 17 HOH HOH . C 3 HOH A 12 612 15 HOH HOH . C 3 HOH A 13 613 27 HOH HOH . C 3 HOH A 14 614 32 HOH HOH . C 3 HOH A 15 615 65 HOH HOH . C 3 HOH A 16 616 52 HOH HOH . C 3 HOH A 17 617 72 HOH HOH . C 3 HOH A 18 618 39 HOH HOH . C 3 HOH A 19 619 87 HOH HOH . C 3 HOH A 20 620 40 HOH HOH . C 3 HOH A 21 621 73 HOH HOH . C 3 HOH A 22 622 67 HOH HOH . C 3 HOH A 23 623 88 HOH HOH . C 3 HOH A 24 624 46 HOH HOH . C 3 HOH A 25 625 18 HOH HOH . C 3 HOH A 26 626 50 HOH HOH . C 3 HOH A 27 627 68 HOH HOH . C 3 HOH A 28 628 49 HOH HOH . C 3 HOH A 29 629 78 HOH HOH . C 3 HOH A 30 630 16 HOH HOH . C 3 HOH A 31 631 19 HOH HOH . C 3 HOH A 32 632 24 HOH HOH . C 3 HOH A 33 633 66 HOH HOH . C 3 HOH A 34 634 71 HOH HOH . C 3 HOH A 35 635 25 HOH HOH . C 3 HOH A 36 636 85 HOH HOH . C 3 HOH A 37 637 38 HOH HOH . C 3 HOH A 38 638 26 HOH HOH . C 3 HOH A 39 639 22 HOH HOH . C 3 HOH A 40 640 69 HOH HOH . C 3 HOH A 41 641 20 HOH HOH . C 3 HOH A 42 642 28 HOH HOH . C 3 HOH A 43 643 55 HOH HOH . C 3 HOH A 44 644 59 HOH HOH . C 3 HOH A 45 645 62 HOH HOH . C 3 HOH A 46 646 2 HOH HOH . C 3 HOH A 47 647 74 HOH HOH . C 3 HOH A 48 648 63 HOH HOH . C 3 HOH A 49 649 29 HOH HOH . C 3 HOH A 50 650 33 HOH HOH . C 3 HOH A 51 651 42 HOH HOH . C 3 HOH A 52 652 57 HOH HOH . C 3 HOH A 53 653 31 HOH HOH . C 3 HOH A 54 654 53 HOH HOH . C 3 HOH A 55 655 56 HOH HOH . C 3 HOH A 56 656 34 HOH HOH . C 3 HOH A 57 657 64 HOH HOH . C 3 HOH A 58 658 10 HOH HOH . C 3 HOH A 59 659 12 HOH HOH . C 3 HOH A 60 660 96 HOH HOH . C 3 HOH A 61 661 43 HOH HOH . C 3 HOH A 62 662 95 HOH HOH . C 3 HOH A 63 663 61 HOH HOH . C 3 HOH A 64 664 51 HOH HOH . C 3 HOH A 65 665 37 HOH HOH . C 3 HOH A 66 666 93 HOH HOH . C 3 HOH A 67 667 75 HOH HOH . C 3 HOH A 68 668 6 HOH HOH . C 3 HOH A 69 669 8 HOH HOH . C 3 HOH A 70 670 76 HOH HOH . C 3 HOH A 71 671 11 HOH HOH . C 3 HOH A 72 672 5 HOH HOH . C 3 HOH A 73 673 9 HOH HOH . C 3 HOH A 74 674 3 HOH HOH . C 3 HOH A 75 675 94 HOH HOH . C 3 HOH A 76 676 4 HOH HOH . C 3 HOH A 77 677 13 HOH HOH . C 3 HOH A 78 678 14 HOH HOH . C 3 HOH A 79 679 30 HOH HOH . C 3 HOH A 80 680 45 HOH HOH . C 3 HOH A 81 681 1 HOH HOH . C 3 HOH A 82 682 48 HOH HOH . C 3 HOH A 83 683 84 HOH HOH . C 3 HOH A 84 684 79 HOH HOH . C 3 HOH A 85 685 44 HOH HOH . C 3 HOH A 86 686 86 HOH HOH . C 3 HOH A 87 687 21 HOH HOH . C 3 HOH A 88 688 90 HOH HOH . C 3 HOH A 89 689 70 HOH HOH . C 3 HOH A 90 690 89 HOH HOH . C 3 HOH A 91 691 91 HOH HOH . C 3 HOH A 92 692 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1D9F . . . B 2 14.641 -5.622 11.763 1 21.4 ? N1 A1D9F 501 A 1 HETATM 2 C C4 A1D9F . . . B 2 13.334 -2.009 11.495 1 24.15 ? C4 A1D9F 501 A 1 HETATM 3 C C5 A1D9F . . . B 2 12.335 -1.287 10.618 1 25.08 ? C5 A1D9F 501 A 1 HETATM 4 C C6 A1D9F . . . B 2 12.698 -1.417 9.168 1 25.61 ? C6 A1D9F 501 A 1 HETATM 5 C C7 A1D9F . . . B 2 12.709 -2.892 8.767 1 23.99 ? C7 A1D9F 501 A 1 HETATM 6 C C8 A1D9F . . . B 2 13.714 -3.642 9.631 1 23.26 ? C8 A1D9F 501 A 1 HETATM 7 C C10 A1D9F . . . B 2 15.886 -7.459 10.709 1 21.69 ? C10 A1D9F 501 A 1 HETATM 8 C C13 A1D9F . . . B 2 15.986 -10.15 9.923 1 19.43 ? C13 A1D9F 501 A 1 HETATM 9 C C15 A1D9F . . . B 2 17.209 -12.268 9.067 1 20.03 ? C15 A1D9F 501 A 1 HETATM 10 C C17 A1D9F . . . B 2 17.195 -13.621 8.78 1 19.66 ? C17 A1D9F 501 A 1 HETATM 11 C C20 A1D9F . . . B 2 14.957 -12.348 9.757 1 20.33 ? C20 A1D9F 501 A 1 HETATM 12 C C21 A1D9F . . . B 2 16.943 -9.588 10.782 1 20.44 ? C21 A1D9F 501 A 1 HETATM 13 C C22 A1D9F . . . B 2 16.918 -8.272 11.178 1 20.93 ? C22 A1D9F 501 A 1 HETATM 14 C C1 A1D9F . . . B 2 15.709 -6.012 11.036 1 20.42 ? C1 A1D9F 501 A 1 HETATM 15 C C11 A1D9F . . . B 2 14.92 -8.016 9.858 1 19.75 ? C11 A1D9F 501 A 1 HETATM 16 C C12 A1D9F . . . B 2 14.962 -9.338 9.475 1 20.59 ? C12 A1D9F 501 A 1 HETATM 17 C C14 A1D9F . . . B 2 16.076 -11.589 9.555 1 19.93 ? C14 A1D9F 501 A 1 HETATM 18 C C16 A1D9F . . . B 2 19.979 -12.377 9.492 1 22.2 ? C16 A1D9F 501 A 1 HETATM 19 C C18 A1D9F . . . B 2 16.047 -14.347 8.988 1 20.46 ? C18 A1D9F 501 A 1 HETATM 20 C C19 A1D9F . . . B 2 14.933 -13.693 9.473 1 20.46 ? C19 A1D9F 501 A 1 HETATM 21 C C2 A1D9F . . . B 2 14.458 -4.182 12.019 1 21.2 ? C2 A1D9F 501 A 1 HETATM 22 C C23 A1D9F . . . B 2 19.408 -7.129 11.127 1 20.04 ? C23 A1D9F 501 A 1 HETATM 23 C C3 A1D9F . . . B 2 13.422 -3.486 11.126 1 22.72 ? C3 A1D9F 501 A 1 HETATM 24 C C9 A1D9F . . . B 2 13.657 -6.532 12.313 1 22.9 ? C9 A1D9F 501 A 1 HETATM 25 F F1 A1D9F . . . B 2 12.172 -4.107 11.403 1 25.81 ? F1 A1D9F 501 A 1 HETATM 26 O O1 A1D9F . . . B 2 16.511 -5.2 10.607 1 21.01 ? O1 A1D9F 501 A 1 HETATM 27 O O2 A1D9F . . . B 2 17.684 -6.648 13.013 1 21.42 ? O2 A1D9F 501 A 1 HETATM 28 O O3 A1D9F . . . B 2 18.746 -8.894 12.853 1 23.03 ? O3 A1D9F 501 A 1 HETATM 29 S S1 A1D9F . . . B 2 18.688 -11.392 8.737 1 25.13 ? S1 A1D9F 501 A 1 HETATM 30 S S2 A1D9F . . . B 2 18.21 -7.702 12.25 1 22.13 ? S2 A1D9F 501 A 1 HETATM 31 H H4_2 A1D9F . . . B 2 14.315 -1.548 11.382 1 28.9 ? H4_2 A1D9F 501 A 1 HETATM 32 H H4_1 A1D9F . . . B 2 13.036 -1.913 12.539 1 28.9 ? H4_1 A1D9F 501 A 1 HETATM 33 H H5_2 A1D9F . . . B 2 12.308 -0.232 10.892 1 30.01 ? H5_2 A1D9F 501 A 1 HETATM 34 H H5_1 A1D9F . . . B 2 11.341 -1.703 10.782 1 30.01 ? H5_1 A1D9F 501 A 1 HETATM 35 H H6_1 A1D9F . . . B 2 13.684 -0.984 8.998 1 30.65 ? H6_1 A1D9F 501 A 1 HETATM 36 H H6_2 A1D9F . . . B 2 11.971 -0.879 8.559 1 30.65 ? H6_2 A1D9F 501 A 1 HETATM 37 H H7_2 A1D9F . . . B 2 12.987 -2.984 7.717 1 28.71 ? H7_2 A1D9F 501 A 1 HETATM 38 H H7_1 A1D9F . . . B 2 11.716 -3.317 8.907 1 28.71 ? H7_1 A1D9F 501 A 1 HETATM 39 H H8_1 A1D9F . . . B 2 13.695 -4.699 9.369 1 27.84 ? H8_1 A1D9F 501 A 1 HETATM 40 H H8_2 A1D9F . . . B 2 14.717 -3.274 9.42 1 27.84 ? H8_2 A1D9F 501 A 1 HETATM 41 H HC17 A1D9F . . . B 2 18.082 -14.103 8.395 1 23.52 ? HC17 A1D9F 501 A 1 HETATM 42 H HC20 A1D9F . . . B 2 14.06 -11.893 10.15 1 24.32 ? HC20 A1D9F 501 A 1 HETATM 43 H HC21 A1D9F . . . B 2 17.746 -10.201 11.162 1 24.45 ? HC21 A1D9F 501 A 1 HETATM 44 H HC11 A1D9F . . . B 2 14.117 -7.397 9.487 1 23.62 ? HC11 A1D9F 501 A 1 HETATM 45 H HC12 A1D9F . . . B 2 14.2 -9.747 8.828 1 24.62 ? HC12 A1D9F 501 A 1 HETATM 46 H H163 A1D9F . . . B 2 20.688 -11.722 9.997 1 26.56 ? H163 A1D9F 501 A 1 HETATM 47 H H162 A1D9F . . . B 2 20.497 -12.948 8.722 1 26.56 ? H162 A1D9F 501 A 1 HETATM 48 H H161 A1D9F . . . B 2 19.538 -13.061 10.216 1 26.56 ? H161 A1D9F 501 A 1 HETATM 49 H HC18 A1D9F . . . B 2 16.026 -15.405 8.774 1 24.47 ? HC18 A1D9F 501 A 1 HETATM 50 H HC19 A1D9F . . . B 2 14.018 -14.243 9.637 1 24.48 ? HC19 A1D9F 501 A 1 HETATM 51 H H2_2 A1D9F . . . B 2 15.416 -3.67 11.934 1 25.36 ? H2_2 A1D9F 501 A 1 HETATM 52 H H2_1 A1D9F . . . B 2 14.201 -4.025 13.066 1 25.36 ? H2_1 A1D9F 501 A 1 HETATM 53 H H232 A1D9F . . . B 2 19.625 -6.08 11.33 1 23.97 ? H232 A1D9F 501 A 1 HETATM 54 H H231 A1D9F . . . B 2 19.031 -7.231 10.109 1 23.97 ? H231 A1D9F 501 A 1 HETATM 55 H H233 A1D9F . . . B 2 20.32 -7.716 11.237 1 23.97 ? H233 A1D9F 501 A 1 HETATM 56 H H9_1 A1D9F . . . B 2 14.162 -7.397 12.743 1 27.4 ? H9_1 A1D9F 501 A 1 HETATM 57 H H9_2 A1D9F . . . B 2 12.984 -6.862 11.521 1 27.4 ? H9_2 A1D9F 501 A 1 HETATM 58 H H9_3 A1D9F . . . B 2 13.084 -6.024 13.088 1 27.4 ? H9_3 A1D9F 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 58 #