data_9IIA # _model_server_result.job_id uxeyqOilLI_nyrIoj0CwZQ _model_server_result.datetime_utc '2025-01-25 08:21:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9iia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 9IIA # _exptl.entry_id 9IIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.2 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9IIA _cell.length_a 202.21 _cell.length_b 202.21 _cell.length_c 111.04 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9IIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1,2 B,E,F,G,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_555 -y,-x,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 55.52 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C7 H16 O4' _chem_comp.formula_weight 164.2 _chem_comp.id TOE _chem_comp.mon_nstd_flag . _chem_comp.name 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK' OI' TOE sing 329 n n OI' CH' TOE sing 330 n n CH' CG' TOE sing 331 n n CG' OF' TOE sing 332 n n CE' OF' TOE sing 333 n n CE' CD' TOE sing 334 n n CA' O2' TOE sing 335 n n CA' CB' TOE sing 336 n n OC' CB' TOE sing 337 n n OC' CD' TOE sing 338 n n O2' H1 TOE sing 339 n n CA' H2 TOE sing 340 n n CA' H3 TOE sing 341 n n CB' H4 TOE sing 342 n n CB' H5 TOE sing 343 n n CD' H6 TOE sing 344 n n CD' H7 TOE sing 345 n n CE' H8 TOE sing 346 n n CE' H9 TOE sing 347 n n CG' H10 TOE sing 348 n n CG' H11 TOE sing 349 n n CH' H12 TOE sing 350 n n CH' H13 TOE sing 351 n n CK' H14 TOE sing 352 n n CK' H15 TOE sing 353 n n CK' H16 TOE sing 354 n n # _atom_sites.entry_id 9IIA _atom_sites.fract_transf_matrix[1][1] 0.004945 _atom_sites.fract_transf_matrix[1][2] 0.002855 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PPV A 1 501 502 PPV PPV . D 3 TOE A 1 502 503 TOE TOE . E 2 PPV B 1 501 503 PPV PPV . F 4 MOE B 1 502 504 MOE MOE . G 3 TOE B 1 503 505 TOE TOE . H 5 HOH A 1 601 23 HOH HOH . H 5 HOH A 2 602 85 HOH HOH . H 5 HOH A 3 603 81 HOH HOH . H 5 HOH A 4 604 52 HOH HOH . H 5 HOH A 5 605 42 HOH HOH . H 5 HOH A 6 606 72 HOH HOH . H 5 HOH A 7 607 11 HOH HOH . H 5 HOH A 8 608 96 HOH HOH . H 5 HOH A 9 609 32 HOH HOH . H 5 HOH A 10 610 8 HOH HOH . H 5 HOH A 11 611 33 HOH HOH . H 5 HOH A 12 612 14 HOH HOH . H 5 HOH A 13 613 82 HOH HOH . H 5 HOH A 14 614 15 HOH HOH . H 5 HOH A 15 615 108 HOH HOH . H 5 HOH A 16 616 27 HOH HOH . H 5 HOH A 17 617 43 HOH HOH . H 5 HOH A 18 618 16 HOH HOH . H 5 HOH A 19 619 22 HOH HOH . H 5 HOH A 20 620 109 HOH HOH . H 5 HOH A 21 621 5 HOH HOH . H 5 HOH A 22 622 56 HOH HOH . H 5 HOH A 23 623 28 HOH HOH . H 5 HOH A 24 624 106 HOH HOH . H 5 HOH A 25 625 17 HOH HOH . H 5 HOH A 26 626 58 HOH HOH . H 5 HOH A 27 627 55 HOH HOH . H 5 HOH A 28 628 115 HOH HOH . H 5 HOH A 29 629 25 HOH HOH . H 5 HOH A 30 630 67 HOH HOH . H 5 HOH A 31 631 54 HOH HOH . H 5 HOH A 32 632 26 HOH HOH . H 5 HOH A 33 633 2 HOH HOH . H 5 HOH A 34 634 62 HOH HOH . H 5 HOH A 35 635 24 HOH HOH . H 5 HOH A 36 636 53 HOH HOH . H 5 HOH A 37 637 39 HOH HOH . H 5 HOH A 38 638 37 HOH HOH . H 5 HOH A 39 639 59 HOH HOH . H 5 HOH A 40 640 98 HOH HOH . H 5 HOH A 41 641 84 HOH HOH . H 5 HOH A 42 642 9 HOH HOH . H 5 HOH A 43 643 69 HOH HOH . H 5 HOH A 44 644 113 HOH HOH . H 5 HOH A 45 645 64 HOH HOH . H 5 HOH A 46 646 63 HOH HOH . H 5 HOH A 47 647 114 HOH HOH . H 5 HOH A 48 648 129 HOH HOH . I 5 HOH B 1 601 47 HOH HOH . I 5 HOH B 2 602 122 HOH HOH . I 5 HOH B 3 603 7 HOH HOH . I 5 HOH B 4 604 102 HOH HOH . I 5 HOH B 5 605 21 HOH HOH . I 5 HOH B 6 606 57 HOH HOH . I 5 HOH B 7 607 35 HOH HOH . I 5 HOH B 8 608 73 HOH HOH . I 5 HOH B 9 609 6 HOH HOH . I 5 HOH B 10 610 41 HOH HOH . I 5 HOH B 11 611 31 HOH HOH . I 5 HOH B 12 612 19 HOH HOH . I 5 HOH B 13 613 45 HOH HOH . I 5 HOH B 14 614 4 HOH HOH . I 5 HOH B 15 615 20 HOH HOH . I 5 HOH B 16 616 3 HOH HOH . I 5 HOH B 17 617 30 HOH HOH . I 5 HOH B 18 618 38 HOH HOH . I 5 HOH B 19 619 80 HOH HOH . I 5 HOH B 20 620 93 HOH HOH . I 5 HOH B 21 621 51 HOH HOH . I 5 HOH B 22 622 77 HOH HOH . I 5 HOH B 23 623 83 HOH HOH . I 5 HOH B 24 624 34 HOH HOH . I 5 HOH B 25 625 48 HOH HOH . I 5 HOH B 26 626 60 HOH HOH . I 5 HOH B 27 627 50 HOH HOH . I 5 HOH B 28 628 110 HOH HOH . I 5 HOH B 29 629 71 HOH HOH . I 5 HOH B 30 630 29 HOH HOH . I 5 HOH B 31 631 10 HOH HOH . I 5 HOH B 32 632 1 HOH HOH . I 5 HOH B 33 633 104 HOH HOH . I 5 HOH B 34 634 12 HOH HOH . I 5 HOH B 35 635 44 HOH HOH . I 5 HOH B 36 636 13 HOH HOH . I 5 HOH B 37 637 132 HOH HOH . I 5 HOH B 38 638 74 HOH HOH . I 5 HOH B 39 639 65 HOH HOH . I 5 HOH B 40 640 100 HOH HOH . I 5 HOH B 41 641 112 HOH HOH . I 5 HOH B 42 642 133 HOH HOH . I 5 HOH B 43 643 78 HOH HOH . I 5 HOH B 44 644 68 HOH HOH . I 5 HOH B 45 645 66 HOH HOH . I 5 HOH B 46 646 94 HOH HOH . I 5 HOH B 47 647 126 HOH HOH . I 5 HOH B 48 648 97 HOH HOH . I 5 HOH B 49 649 121 HOH HOH . I 5 HOH B 50 650 103 HOH HOH . I 5 HOH B 51 651 124 HOH HOH . I 5 HOH B 52 652 128 HOH HOH . I 5 HOH B 53 653 61 HOH HOH . I 5 HOH B 54 654 101 HOH HOH . I 5 HOH B 55 655 127 HOH HOH . I 5 HOH B 56 656 36 HOH HOH . I 5 HOH B 57 657 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2' TOE . . . D 3 58.949 4.34 26.508 1 20 ? O2' TOE 502 A 1 HETATM 2 C CA' TOE . . . D 3 58.407 3.043 26.684 1 20 ? CA' TOE 502 A 1 HETATM 3 C CB' TOE . . . D 3 56.89 3.145 26.716 1 20 ? CB' TOE 502 A 1 HETATM 4 O OC' TOE . . . D 3 56.337 1.882 27.051 1 20 ? OC' TOE 502 A 1 HETATM 5 C CD' TOE . . . D 3 55.524 1.369 26.005 1 20 ? CD' TOE 502 A 1 HETATM 6 C CE' TOE . . . D 3 54.978 0.018 26.436 1 20 ? CE' TOE 502 A 1 HETATM 7 O OF' TOE . . . D 3 55.18 -0.928 25.396 1 20 ? OF' TOE 502 A 1 HETATM 8 C CG' TOE . . . D 3 55.489 -2.214 25.918 1 20 ? CG' TOE 502 A 1 HETATM 9 C CH' TOE . . . D 3 56.839 -2.67 25.387 1 20 ? CH' TOE 502 A 1 HETATM 10 O OI' TOE . . . D 3 57.777 -1.609 25.503 1 20 ? OI' TOE 502 A 1 HETATM 11 C CK' TOE . . . D 3 58.588 -1.745 26.663 1 20 ? CK' TOE 502 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #