data_9IJP # _model_server_result.job_id iJbCyWrg9HSeoY195qUTSg _model_server_result.datetime_utc '2024-10-13 19:21:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ijp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":203}' # _entry.id 9IJP # _exptl.entry_id 9IJP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 337.935 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Tetraphosphate _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9IJP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9IJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'H6 O13 P4' _chem_comp.formula_weight 337.935 _chem_comp.id 7TT _chem_comp.mon_nstd_flag . _chem_comp.name Tetraphosphate _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '[oxidanyl(phosphonooxy)phosphoryl] phosphono hydrogen phosphate;[oxido-[oxido(phosphonatooxy)phosphoryl]oxyphosphoryl] phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O16 P14 7TT doub 1 n n O15 P14 7TT sing 2 n n P14 O21 7TT sing 3 n n P14 O13 7TT sing 4 n n O12 P11 7TT doub 5 n n O10 P11 7TT sing 6 n n O10 P08 7TT sing 7 n n O09 P08 7TT doub 8 n n O13 P11 7TT sing 9 n n P11 O22 7TT sing 10 n n P08 O07 7TT sing 11 n n P08 O23 7TT sing 12 n n O07 P05 7TT sing 13 n n O04 P05 7TT doub 14 n n O24 P05 7TT sing 15 n n P05 O06 7TT sing 16 n n O06 H1 7TT sing 17 n n O15 H2 7TT sing 18 n n O21 H3 7TT sing 19 n n O22 H4 7TT sing 20 n n O23 H5 7TT sing 21 n n O24 H6 7TT sing 22 n n # _atom_sites.entry_id 9IJP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 7TT C 1 201 1 7TT POL . H 2 7TT C 1 202 1 7TT POL . I 2 7TT C 1 203 1 7TT POL . J 2 7TT L 1 201 1 7TT POL . K 2 7TT L 1 202 1 7TT POL . L 2 7TT L 1 203 1 7TT POL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O04 7TT . . . I 2 154.089 169.034 158.137 1 87.3 ? O04 7TT 203 C 1 HETATM 2 P P05 7TT . . . I 2 153.62 170.169 157.262 1 87.3 ? P05 7TT 203 C 1 HETATM 3 O O06 7TT . . . I 2 154.315 171.441 157.682 1 87.3 ? O06 7TT 203 C 1 HETATM 4 O O07 7TT . . . I 2 153.96 169.84 155.683 1 87.3 ? O07 7TT 203 C 1 HETATM 5 P P08 7TT . . . I 2 153.456 170.79 154.435 1 87.3 ? P08 7TT 203 C 1 HETATM 6 O O09 7TT . . . I 2 152.032 171.217 154.691 1 87.3 ? O09 7TT 203 C 1 HETATM 7 O O10 7TT . . . I 2 153.527 169.981 153.001 1 87.3 ? O10 7TT 203 C 1 HETATM 8 P P11 7TT . . . I 2 152.854 170.601 151.63 1 87.3 ? P11 7TT 203 C 1 HETATM 9 O O12 7TT . . . I 2 153.307 172.03 151.466 1 87.3 ? O12 7TT 203 C 1 HETATM 10 O O13 7TT . . . I 2 153.296 169.74 150.297 1 87.3 ? O13 7TT 203 C 1 HETATM 11 P P14 7TT . . . I 2 153.118 170.295 148.755 1 87.3 ? P14 7TT 203 C 1 HETATM 12 O O15 7TT . . . I 2 153.714 171.677 148.643 1 87.3 ? O15 7TT 203 C 1 HETATM 13 O O16 7TT . . . I 2 151.655 170.349 148.393 1 87.3 ? O16 7TT 203 C 1 HETATM 14 O O21 7TT . . . I 2 153.821 169.368 147.797 1 87.3 ? O21 7TT 203 C 1 HETATM 15 O O22 7TT . . . I 2 151.354 170.567 151.763 1 87.3 ? O22 7TT 203 C 1 HETATM 16 O O23 7TT . . . I 2 154.332 172.015 154.352 1 87.3 ? O23 7TT 203 C 1 HETATM 17 O O24 7TT . . . I 2 152.13 170.333 157.421 1 87.3 ? O24 7TT 203 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #