data_9IK3
#
_model_server_result.job_id            6mfj9DSGvtyUdyUglXhkzQ 
_model_server_result.datetime_utc      '2025-07-05 09:51:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9ik3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":3002}' 
#
_entry.id    9IK3 
#
_exptl.entry_id    9IK3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              776.87 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "3,5,3',5'-TETRAIODO-L-THYRONINE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.77 
_cell.angle_gamma         90 
_cell.entry_id            9IK3 
_cell.length_a            59.473 
_cell.length_b            88.392 
_cell.length_c            59.641 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9IK3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
#
_chem_comp.formula           'C15 H11 I4 N O4' 
_chem_comp.formula_weight    776.87 
_chem_comp.id                T44 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "3,5,3',5'-TETRAIODO-L-THYRONINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 T44 doub 290 n y 
C1 C6 T44 sing 291 n y 
C1 C7 T44 sing 292 n n 
C2 C3 T44 sing 293 n y 
C2 H1 T44 sing 294 n n 
C3 C4 T44 doub 295 n y 
C3 I3 T44 sing 296 n n 
C4 C5 T44 sing 297 n y 
C4 O4 T44 sing 298 n n 
C5 C6 T44 doub 299 n y 
C5 I5 T44 sing 300 n n 
C6 H6 T44 sing 301 n n 
C7 CA T44 sing 302 n n 
C7 H71 T44 sing 303 n n 
C7 H72 T44 sing 304 n n 
CA C T44 sing 305 n n 
CA N T44 sing 306 n n 
CA HA T44 sing 307 n n 
C O T44 doub 308 n n 
C OXT T44 sing 309 n n 
C1' C2' T44 doub 310 n y 
C1' C6' T44 sing 311 n y 
C1' O4 T44 sing 312 n n 
C2' C3' T44 sing 313 n y 
C2' H2' T44 sing 314 n n 
C3' C4' T44 doub 315 n y 
C3' I3' T44 sing 316 n n 
C4' C5' T44 sing 317 n y 
C4' O4' T44 sing 318 n n 
C5' C6' T44 doub 319 n y 
C5' I5' T44 sing 320 n n 
C6' H6' T44 sing 321 n n 
N H T44 sing 322 n n 
N H2 T44 sing 323 n n 
O4' HO4' T44 sing 324 n n 
OXT HXT T44 sing 325 n n 
#
_atom_sites.entry_id                     9IK3 
_atom_sites.fract_transf_matrix[1][1]    0.016814 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004119 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011313 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017263 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 T44 A 1 3001 3001 T44 T44 . 
C 2 T44 A 1 3002 3002 T44 T44 . 
D 2 T44 A 1 3003 3003 T44 T44 . 
E 2 T44 A 1 3004 3004 T44 T44 . 
F 3 HOH A 1 3101 62 HOH HOH . 
F 3 HOH A 2 3102 15 HOH HOH . 
F 3 HOH A 3 3103 71 HOH HOH . 
F 3 HOH A 4 3104 29 HOH HOH . 
F 3 HOH A 5 3105 47 HOH HOH . 
F 3 HOH A 6 3106 77 HOH HOH . 
F 3 HOH A 7 3107 17 HOH HOH . 
F 3 HOH A 8 3108 19 HOH HOH . 
F 3 HOH A 9 3109 76 HOH HOH . 
F 3 HOH A 10 3110 56 HOH HOH . 
F 3 HOH A 11 3111 35 HOH HOH . 
F 3 HOH A 12 3112 22 HOH HOH . 
F 3 HOH A 13 3113 4 HOH HOH . 
F 3 HOH A 14 3114 13 HOH HOH . 
F 3 HOH A 15 3115 44 HOH HOH . 
F 3 HOH A 16 3116 32 HOH HOH . 
F 3 HOH A 17 3117 8 HOH HOH . 
F 3 HOH A 18 3118 24 HOH HOH . 
F 3 HOH A 19 3119 45 HOH HOH . 
F 3 HOH A 20 3120 14 HOH HOH . 
F 3 HOH A 21 3121 58 HOH HOH . 
F 3 HOH A 22 3122 21 HOH HOH . 
F 3 HOH A 23 3123 9 HOH HOH . 
F 3 HOH A 24 3124 28 HOH HOH . 
F 3 HOH A 25 3125 23 HOH HOH . 
F 3 HOH A 26 3126 7 HOH HOH . 
F 3 HOH A 27 3127 46 HOH HOH . 
F 3 HOH A 28 3128 40 HOH HOH . 
F 3 HOH A 29 3129 12 HOH HOH . 
F 3 HOH A 30 3130 11 HOH HOH . 
F 3 HOH A 31 3131 6 HOH HOH . 
F 3 HOH A 32 3132 53 HOH HOH . 
F 3 HOH A 33 3133 65 HOH HOH . 
F 3 HOH A 34 3134 27 HOH HOH . 
F 3 HOH A 35 3135 37 HOH HOH . 
F 3 HOH A 36 3136 1 HOH HOH . 
F 3 HOH A 37 3137 49 HOH HOH . 
F 3 HOH A 38 3138 34 HOH HOH . 
F 3 HOH A 39 3139 33 HOH HOH . 
F 3 HOH A 40 3140 30 HOH HOH . 
F 3 HOH A 41 3141 26 HOH HOH . 
F 3 HOH A 42 3142 3 HOH HOH . 
F 3 HOH A 43 3143 20 HOH HOH . 
F 3 HOH A 44 3144 18 HOH HOH . 
F 3 HOH A 45 3145 52 HOH HOH . 
F 3 HOH A 46 3146 59 HOH HOH . 
F 3 HOH A 47 3147 54 HOH HOH . 
F 3 HOH A 48 3148 69 HOH HOH . 
F 3 HOH A 49 3149 10 HOH HOH . 
F 3 HOH A 50 3150 16 HOH HOH . 
F 3 HOH A 51 3151 5 HOH HOH . 
F 3 HOH A 52 3152 41 HOH HOH . 
F 3 HOH A 53 3153 39 HOH HOH . 
F 3 HOH A 54 3154 42 HOH HOH . 
F 3 HOH A 55 3155 31 HOH HOH . 
F 3 HOH A 56 3156 78 HOH HOH . 
F 3 HOH A 57 3157 50 HOH HOH . 
F 3 HOH A 58 3158 57 HOH HOH . 
F 3 HOH A 59 3159 51 HOH HOH . 
F 3 HOH A 60 3160 25 HOH HOH . 
F 3 HOH A 61 3161 72 HOH HOH . 
F 3 HOH A 62 3162 61 HOH HOH . 
F 3 HOH A 63 3163 64 HOH HOH . 
F 3 HOH A 64 3164 74 HOH HOH . 
F 3 HOH A 65 3165 43 HOH HOH . 
F 3 HOH A 66 3166 48 HOH HOH . 
F 3 HOH A 67 3167 36 HOH HOH . 
F 3 HOH A 68 3168 60 HOH HOH . 
F 3 HOH A 69 3169 67 HOH HOH . 
F 3 HOH A 70 3170 55 HOH HOH . 
F 3 HOH A 71 3171 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 T44 . . . C 2 1.08 10.364 41.853 1 107.1 ? C1 T44 3002 A 1 
HETATM 2 C C2 T44 . . . C 2 -0.015 10.201 41.02 1 103.8 ? C2 T44 3002 A 1 
HETATM 3 C C3 T44 . . . C 2 0.172 9.772 39.717 1 107.95 ? C3 T44 3002 A 1 
HETATM 4 C C4 T44 . . . C 2 1.44 9.498 39.252 1 100.9 ? C4 T44 3002 A 1 
HETATM 5 C C5 T44 . . . C 2 2.529 9.665 40.076 1 105.96 ? C5 T44 3002 A 1 
HETATM 6 C C6 T44 . . . C 2 2.354 10.095 41.38 1 105.18 ? C6 T44 3002 A 1 
HETATM 7 C C7 T44 . . . C 2 0.888 10.837 43.294 1 107.26 ? C7 T44 3002 A 1 
HETATM 8 C CA T44 . . . C 2 -0.105 11.994 43.394 1 111.34 ? CA T44 3002 A 1 
HETATM 9 C C T44 . . . C 2 -1.287 11.597 44.277 1 113.15 ? C T44 3002 A 1 
HETATM 10 C C1' T44 . . . C 2 1.439 7.697 37.774 1 93.55 ? C1' T44 3002 A 1 
HETATM 11 C C2' T44 . . . C 2 1.267 7.208 36.493 1 87.14 ? C2' T44 3002 A 1 
HETATM 12 C C3' T44 . . . C 2 1.081 5.858 36.279 1 84.18 ? C3' T44 3002 A 1 
HETATM 13 C C4' T44 . . . C 2 1.067 4.987 37.349 1 77.71 ? C4' T44 3002 A 1 
HETATM 14 C C5' T44 . . . C 2 1.239 5.467 38.636 1 93.33 ? C5' T44 3002 A 1 
HETATM 15 C C6' T44 . . . C 2 1.429 6.827 38.851 1 95.39 ? C6' T44 3002 A 1 
HETATM 16 N N T44 . . . C 2 0.556 13.155 43.962 1 109.85 ? N T44 3002 A 1 
HETATM 17 O O4 T44 . . . C 2 1.627 9.074 37.937 1 101.54 ? O4 T44 3002 A 1 
HETATM 18 O O4' T44 . . . C 2 0.877 3.623 37.119 1 62.34 ? O4' T44 3002 A 1 
HETATM 19 O O T44 . . . C 2 -1.351 12.01 45.467 1 110.58 ? O T44 3002 A 1 
HETATM 20 O OXT T44 . . . C 2 -2.197 10.86 43.816 1 107.72 ? OXT T44 3002 A 1 
HETATM 21 I I3 T44 . . . C 2 -1.458 9.509 38.411 1 142.96 ? I3 T44 3002 A 1 
HETATM 22 I I3' T44 . . . C 2 0.822 5.142 34.316 1 97.57 ? I3' T44 3002 A 1 
HETATM 23 I I5 T44 . . . C 2 4.445 9.248 39.317 1 131.09 ? I5 T44 3002 A 1 
HETATM 24 I I5' T44 . . . C 2 1.217 4.128 40.267 1 126.19 ? I5' T44 3002 A 1 
#
_model_server_stats.io_time_ms              115 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           24 
#