data_9IL7
#
_model_server_result.job_id            RVEVK9Ozw4sJT1T3TRWL-Q 
_model_server_result.datetime_utc      '2025-07-04 18:19:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9il7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"EA","auth_seq_id":318}' 
#
_entry.id    9IL7 
#
_exptl.entry_id    9IL7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.123 
_cell.angle_gamma         90 
_cell.entry_id            9IL7 
_cell.length_a            35.621 
_cell.length_b            51.076 
_cell.length_c            129.792 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9IL7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             EA 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 47 A CYS 45 1_555 A SG CYS 217 A CYS 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
disulf ? disulf2 B SG CYS 47 B CYS 45 1_555 B SG CYS 217 B CYS 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
covale ? covale1 A OG SER 48 A SER 46 1_555 C C9 A1L2O . A A1L2O 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? 
covale ? covale2 B OG SER 48 B SER 46 1_555 N C9 A1L2O . B A1L2O 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.395 ? 
metalc ? metalc1 B OD1 ASP 18 B ASP 16 1_555 EA NA NA . B NA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     9IL7 
_atom_sites.fract_transf_matrix[1][1]    0.028073 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00006 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019579 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007705 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 A1L2O A 1 301 301 A1L2O LIG . 
D 3 PEG A 1 302 302 PEG PEG . 
E 4 CL A 1 303 13 CL CL . 
F 4 CL A 1 304 16 CL CL . 
G 4 CL A 1 305 17 CL CL . 
H 4 CL A 1 306 18 CL CL . 
I 4 CL A 1 307 19 CL CL . 
J 4 CL A 1 308 20 CL CL . 
K 4 CL A 1 309 21 CL CL . 
L 5 PO4 A 1 310 1 PO4 PO4 . 
M 5 PO4 A 1 311 2 PO4 PO4 . 
N 2 A1L2O B 1 301 301 A1L2O LIG . 
O 3 PEG B 1 302 302 PEG PEG . 
P 3 PEG B 1 303 303 PEG PEG . 
Q 6 PG4 B 1 304 304 PG4 PG4 . 
R 3 PEG B 1 305 305 PEG PEG . 
S 3 PEG B 1 306 306 PEG PEG . 
T 3 PEG B 1 307 307 PEG PEG . 
U 7 IOD B 1 308 1 IOD IOD . 
V 4 CL B 1 309 3 CL CL . 
W 4 CL B 1 310 5 CL CL . 
X 4 CL B 1 311 6 CL CL . 
Y 4 CL B 1 312 7 CL CL . 
Z 4 CL B 1 313 8 CL CL . 
AA 4 CL B 1 314 9 CL CL . 
BA 4 CL B 1 315 10 CL CL . 
CA 4 CL B 1 316 11 CL CL . 
DA 4 CL B 1 317 14 CL CL . 
EA 8 NA B 1 318 1 NA NA . 
FA 5 PO4 B 1 319 3 PO4 PO4 . 
GA 5 PO4 B 1 320 4 PO4 PO4 . 
HA 5 PO4 B 1 321 5 PO4 PO4 . 
IA 9 HOH A 1 401 217 HOH HOH . 
IA 9 HOH A 2 402 71 HOH HOH . 
IA 9 HOH A 3 403 204 HOH HOH . 
IA 9 HOH A 4 404 43 HOH HOH . 
IA 9 HOH A 5 405 177 HOH HOH . 
IA 9 HOH A 6 406 37 HOH HOH . 
IA 9 HOH A 7 407 176 HOH HOH . 
IA 9 HOH A 8 408 34 HOH HOH . 
IA 9 HOH A 9 409 155 HOH HOH . 
IA 9 HOH A 10 410 57 HOH HOH . 
IA 9 HOH A 11 411 203 HOH HOH . 
IA 9 HOH A 12 412 28 HOH HOH . 
IA 9 HOH A 13 413 49 HOH HOH . 
IA 9 HOH A 14 414 54 HOH HOH . 
IA 9 HOH A 15 415 40 HOH HOH . 
IA 9 HOH A 16 416 45 HOH HOH . 
IA 9 HOH A 17 417 79 HOH HOH . 
IA 9 HOH A 18 418 58 HOH HOH . 
IA 9 HOH A 19 419 199 HOH HOH . 
IA 9 HOH A 20 420 70 HOH HOH . 
IA 9 HOH A 21 421 18 HOH HOH . 
IA 9 HOH A 22 422 208 HOH HOH . 
IA 9 HOH A 23 423 39 HOH HOH . 
IA 9 HOH A 24 424 11 HOH HOH . 
IA 9 HOH A 25 425 137 HOH HOH . 
IA 9 HOH A 26 426 180 HOH HOH . 
IA 9 HOH A 27 427 69 HOH HOH . 
IA 9 HOH A 28 428 168 HOH HOH . 
IA 9 HOH A 29 429 220 HOH HOH . 
IA 9 HOH A 30 430 140 HOH HOH . 
IA 9 HOH A 31 431 156 HOH HOH . 
IA 9 HOH A 32 432 219 HOH HOH . 
IA 9 HOH A 33 433 214 HOH HOH . 
IA 9 HOH A 34 434 72 HOH HOH . 
IA 9 HOH A 35 435 73 HOH HOH . 
IA 9 HOH A 36 436 65 HOH HOH . 
IA 9 HOH A 37 437 201 HOH HOH . 
IA 9 HOH A 38 438 173 HOH HOH . 
IA 9 HOH A 39 439 22 HOH HOH . 
IA 9 HOH A 40 440 170 HOH HOH . 
IA 9 HOH A 41 441 181 HOH HOH . 
IA 9 HOH A 42 442 15 HOH HOH . 
IA 9 HOH A 43 443 138 HOH HOH . 
IA 9 HOH A 44 444 3 HOH HOH . 
IA 9 HOH A 45 445 6 HOH HOH . 
IA 9 HOH A 46 446 82 HOH HOH . 
IA 9 HOH A 47 447 75 HOH HOH . 
IA 9 HOH A 48 448 32 HOH HOH . 
IA 9 HOH A 49 449 162 HOH HOH . 
IA 9 HOH A 50 450 136 HOH HOH . 
IA 9 HOH A 51 451 183 HOH HOH . 
IA 9 HOH A 52 452 24 HOH HOH . 
IA 9 HOH A 53 453 164 HOH HOH . 
IA 9 HOH A 54 454 131 HOH HOH . 
IA 9 HOH A 55 455 178 HOH HOH . 
IA 9 HOH A 56 456 91 HOH HOH . 
IA 9 HOH A 57 457 139 HOH HOH . 
JA 9 HOH B 1 401 163 HOH HOH . 
JA 9 HOH B 2 402 215 HOH HOH . 
JA 9 HOH B 3 403 154 HOH HOH . 
JA 9 HOH B 4 404 85 HOH HOH . 
JA 9 HOH B 5 405 143 HOH HOH . 
JA 9 HOH B 6 406 175 HOH HOH . 
JA 9 HOH B 7 407 35 HOH HOH . 
JA 9 HOH B 8 408 41 HOH HOH . 
JA 9 HOH B 9 409 76 HOH HOH . 
JA 9 HOH B 10 410 23 HOH HOH . 
JA 9 HOH B 11 411 80 HOH HOH . 
JA 9 HOH B 12 412 192 HOH HOH . 
JA 9 HOH B 13 413 149 HOH HOH . 
JA 9 HOH B 14 414 3 HOH HOH . 
JA 9 HOH B 15 415 27 HOH HOH . 
JA 9 HOH B 16 416 116 HOH HOH . 
JA 9 HOH B 17 417 16 HOH HOH . 
JA 9 HOH B 18 418 186 HOH HOH . 
JA 9 HOH B 19 419 53 HOH HOH . 
JA 9 HOH B 20 420 56 HOH HOH . 
JA 9 HOH B 21 421 125 HOH HOH . 
JA 9 HOH B 22 422 62 HOH HOH . 
JA 9 HOH B 23 423 193 HOH HOH . 
JA 9 HOH B 24 424 144 HOH HOH . 
JA 9 HOH B 25 425 222 HOH HOH . 
JA 9 HOH B 26 426 67 HOH HOH . 
JA 9 HOH B 27 427 152 HOH HOH . 
JA 9 HOH B 28 428 51 HOH HOH . 
JA 9 HOH B 29 429 46 HOH HOH . 
JA 9 HOH B 30 430 68 HOH HOH . 
JA 9 HOH B 31 431 159 HOH HOH . 
JA 9 HOH B 32 432 105 HOH HOH . 
JA 9 HOH B 33 433 10 HOH HOH . 
JA 9 HOH B 34 434 8 HOH HOH . 
JA 9 HOH B 35 435 145 HOH HOH . 
JA 9 HOH B 36 436 25 HOH HOH . 
JA 9 HOH B 37 437 142 HOH HOH . 
JA 9 HOH B 38 438 42 HOH HOH . 
JA 9 HOH B 39 439 78 HOH HOH . 
JA 9 HOH B 40 440 94 HOH HOH . 
JA 9 HOH B 41 441 33 HOH HOH . 
JA 9 HOH B 42 442 98 HOH HOH . 
JA 9 HOH B 43 443 59 HOH HOH . 
JA 9 HOH B 44 444 19 HOH HOH . 
JA 9 HOH B 45 445 4 HOH HOH . 
JA 9 HOH B 46 446 117 HOH HOH . 
JA 9 HOH B 47 447 196 HOH HOH . 
JA 9 HOH B 48 448 61 HOH HOH . 
JA 9 HOH B 49 449 124 HOH HOH . 
JA 9 HOH B 50 450 60 HOH HOH . 
JA 9 HOH B 51 451 113 HOH HOH . 
JA 9 HOH B 52 452 50 HOH HOH . 
JA 9 HOH B 53 453 9 HOH HOH . 
JA 9 HOH B 54 454 84 HOH HOH . 
JA 9 HOH B 55 455 174 HOH HOH . 
JA 9 HOH B 56 456 44 HOH HOH . 
JA 9 HOH B 57 457 197 HOH HOH . 
JA 9 HOH B 58 458 169 HOH HOH . 
JA 9 HOH B 59 459 13 HOH HOH . 
JA 9 HOH B 60 460 129 HOH HOH . 
JA 9 HOH B 61 461 30 HOH HOH . 
JA 9 HOH B 62 462 182 HOH HOH . 
JA 9 HOH B 63 463 7 HOH HOH . 
JA 9 HOH B 64 464 97 HOH HOH . 
JA 9 HOH B 65 465 93 HOH HOH . 
JA 9 HOH B 66 466 141 HOH HOH . 
JA 9 HOH B 67 467 21 HOH HOH . 
JA 9 HOH B 68 468 191 HOH HOH . 
JA 9 HOH B 69 469 158 HOH HOH . 
JA 9 HOH B 70 470 92 HOH HOH . 
JA 9 HOH B 71 471 101 HOH HOH . 
JA 9 HOH B 72 472 83 HOH HOH . 
JA 9 HOH B 73 473 194 HOH HOH . 
JA 9 HOH B 74 474 224 HOH HOH . 
JA 9 HOH B 75 475 123 HOH HOH . 
JA 9 HOH B 76 476 4 HOH HOH . 
JA 9 HOH B 77 477 150 HOH HOH . 
JA 9 HOH B 78 478 89 HOH HOH . 
JA 9 HOH B 79 479 135 HOH HOH . 
JA 9 HOH B 80 480 122 HOH HOH . 
JA 9 HOH B 81 481 184 HOH HOH . 
JA 9 HOH B 82 482 38 HOH HOH . 
JA 9 HOH B 83 483 133 HOH HOH . 
JA 9 HOH B 84 484 185 HOH HOH . 
JA 9 HOH B 85 485 103 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         EA 
_atom_site.label_entity_id       8 
_atom_site.Cartn_x               27.976 
_atom_site.Cartn_y               -41.875 
_atom_site.Cartn_z               -4.36 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.34 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           318 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           248 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#