data_9IN7 # _model_server_result.job_id XviX8CntjKy1z1YFGZ1rTQ _model_server_result.datetime_utc '2025-06-20 04:27:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9in7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":316}' # _entry.id 9IN7 # _exptl.entry_id 9IN7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9IN7 _cell.length_a 46.498 _cell.length_b 114.948 _cell.length_c 53.171 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9IN7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 P N N ? 7 Q N N ? 7 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C FME 1 A FME 1 1_555 A N ASP 2 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A NZ LYS 204 A LYS 204 1_555 C C15 RET . A RET 302 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.406 ? covale ? covale3 A NZ LYS 204 A LYS 204 1_555 C C15 RET . A RET 302 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.419 ? metalc ? metalc1 A OD2 ASP 68 A ASP 68 1_555 B NA NA . A NA 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.695 ? metalc ? metalc2 A O GLU 132 A GLU 132 1_555 B NA NA . A NA 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.548 ? metalc ? metalc3 A OE2 GLU 132 A GLU 132 1_555 B NA NA . A NA 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 208 n n C1 C2 GOL sing 209 n n C1 H11 GOL sing 210 n n C1 H12 GOL sing 211 n n O1 HO1 GOL sing 212 n n C2 O2 GOL sing 213 n n C2 C3 GOL sing 214 n n C2 H2 GOL sing 215 n n O2 HO2 GOL sing 216 n n C3 O3 GOL sing 217 n n C3 H31 GOL sing 218 n n C3 H32 GOL sing 219 n n O3 HO3 GOL sing 220 n n # _atom_sites.entry_id 9IN7 _atom_sites.fract_transf_matrix[1][1] 0.021506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018807 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 292 NA NA . C 3 RET A 1 302 301 RET RET . D 4 97N A 1 303 303 97N 97N . E 5 OLC A 1 304 401 OLC OLC . F 6 LFA A 1 305 402 LFA LFA . G 6 LFA A 1 306 403 LFA LFA . H 6 LFA A 1 307 404 LFA LFA . I 6 LFA A 1 308 405 LFA LFA . J 6 LFA A 1 309 406 LFA LFA . K 6 LFA A 1 310 407 LFA LFA . L 6 LFA A 1 311 408 LFA LFA . M 6 LFA A 1 312 409 LFA LFA . N 6 LFA A 1 313 410 LFA LFA . O 6 LFA A 1 314 411 LFA LFA . P 7 GOL A 1 315 412 GOL GOL . Q 7 GOL A 1 316 413 GOL GOL . R 7 GOL A 1 317 414 GOL GOL . S 5 OLC A 1 318 415 OLC OLC . T 5 OLC A 1 319 416 OLC OLC . U 5 OLC A 1 320 417 OLC OLC . V 5 OLC A 1 321 418 OLC OLC . W 5 OLC A 1 322 419 OLC OLC . X 8 HOH A 1 401 513 HOH HOH . X 8 HOH A 2 402 534 HOH HOH . X 8 HOH A 3 403 560 HOH HOH . X 8 HOH A 4 404 625 HOH HOH . X 8 HOH A 5 405 523 HOH HOH . X 8 HOH A 6 406 585 HOH HOH . X 8 HOH A 7 407 524 HOH HOH . X 8 HOH A 8 408 530 HOH HOH . X 8 HOH A 9 409 515 HOH HOH . X 8 HOH A 10 410 605 HOH HOH . X 8 HOH A 11 411 567 HOH HOH . X 8 HOH A 12 412 635 HOH HOH . X 8 HOH A 13 413 526 HOH HOH . X 8 HOH A 14 414 584 HOH HOH . X 8 HOH A 15 415 537 HOH HOH . X 8 HOH A 16 416 547 HOH HOH . X 8 HOH A 17 417 566 HOH HOH . X 8 HOH A 18 418 631 HOH HOH . X 8 HOH A 19 419 512 HOH HOH . X 8 HOH A 20 420 542 HOH HOH . X 8 HOH A 21 421 505 HOH HOH . X 8 HOH A 22 422 620 HOH HOH . X 8 HOH A 23 423 626 HOH HOH . X 8 HOH A 24 424 504 HOH HOH . X 8 HOH A 25 425 545 HOH HOH . X 8 HOH A 26 426 582 HOH HOH . X 8 HOH A 27 427 561 HOH HOH . X 8 HOH A 28 428 618 HOH HOH . X 8 HOH A 29 429 521 HOH HOH . X 8 HOH A 30 430 552 HOH HOH . X 8 HOH A 31 431 592 HOH HOH . X 8 HOH A 32 432 645 HOH HOH . X 8 HOH A 33 433 580 HOH HOH . X 8 HOH A 34 434 506 HOH HOH . X 8 HOH A 35 435 507 HOH HOH . X 8 HOH A 36 436 629 HOH HOH . X 8 HOH A 37 437 533 HOH HOH . X 8 HOH A 38 438 558 HOH HOH . X 8 HOH A 39 439 514 HOH HOH . X 8 HOH A 40 440 607 HOH HOH . X 8 HOH A 41 441 503 HOH HOH . X 8 HOH A 42 442 637 HOH HOH . X 8 HOH A 43 443 529 HOH HOH . X 8 HOH A 44 444 590 HOH HOH . X 8 HOH A 45 445 541 HOH HOH . X 8 HOH A 46 446 627 HOH HOH . X 8 HOH A 47 447 509 HOH HOH . X 8 HOH A 48 448 510 HOH HOH . X 8 HOH A 49 449 549 HOH HOH . X 8 HOH A 50 450 586 HOH HOH . X 8 HOH A 51 451 522 HOH HOH . X 8 HOH A 52 452 538 HOH HOH . X 8 HOH A 53 453 610 HOH HOH . X 8 HOH A 54 454 519 HOH HOH . X 8 HOH A 55 455 564 HOH HOH . X 8 HOH A 56 456 516 HOH HOH . X 8 HOH A 57 457 520 HOH HOH . X 8 HOH A 58 458 525 HOH HOH . X 8 HOH A 59 459 644 HOH HOH . X 8 HOH A 60 460 556 HOH HOH . X 8 HOH A 61 461 577 HOH HOH . X 8 HOH A 62 462 532 HOH HOH . X 8 HOH A 63 463 608 HOH HOH . X 8 HOH A 64 464 617 HOH HOH . X 8 HOH A 65 465 508 HOH HOH . X 8 HOH A 66 466 517 HOH HOH . X 8 HOH A 67 467 502 HOH HOH . X 8 HOH A 68 468 619 HOH HOH . X 8 HOH A 69 469 643 HOH HOH . X 8 HOH A 70 470 571 HOH HOH . X 8 HOH A 71 471 576 HOH HOH . X 8 HOH A 72 472 624 HOH HOH . X 8 HOH A 73 473 575 HOH HOH . X 8 HOH A 74 474 630 HOH HOH . X 8 HOH A 75 475 511 HOH HOH . X 8 HOH A 76 476 518 HOH HOH . X 8 HOH A 77 477 572 HOH HOH . X 8 HOH A 78 478 634 HOH HOH . X 8 HOH A 79 479 599 HOH HOH . X 8 HOH A 80 480 555 HOH HOH . X 8 HOH A 81 481 594 HOH HOH . X 8 HOH A 82 482 611 HOH HOH . X 8 HOH A 83 483 574 HOH HOH . X 8 HOH A 84 484 550 HOH HOH . X 8 HOH A 85 485 578 HOH HOH . X 8 HOH A 86 486 589 HOH HOH . X 8 HOH A 87 487 604 HOH HOH . X 8 HOH A 88 488 531 HOH HOH . X 8 HOH A 89 489 573 HOH HOH . X 8 HOH A 90 490 563 HOH HOH . X 8 HOH A 91 491 614 HOH HOH . X 8 HOH A 92 492 565 HOH HOH . X 8 HOH A 93 493 536 HOH HOH . X 8 HOH A 94 494 587 HOH HOH . X 8 HOH A 95 495 539 HOH HOH . X 8 HOH A 96 496 597 HOH HOH . X 8 HOH A 97 497 609 HOH HOH . X 8 HOH A 98 498 551 HOH HOH . X 8 HOH A 99 499 528 HOH HOH . X 8 HOH A 100 500 535 HOH HOH . X 8 HOH A 101 501 557 HOH HOH . X 8 HOH A 102 502 606 HOH HOH . X 8 HOH A 103 503 546 HOH HOH . X 8 HOH A 104 504 527 HOH HOH . X 8 HOH A 105 505 595 HOH HOH . X 8 HOH A 106 506 553 HOH HOH . X 8 HOH A 107 507 596 HOH HOH . X 8 HOH A 108 508 591 HOH HOH . X 8 HOH A 109 509 501 HOH HOH . X 8 HOH A 110 510 543 HOH HOH . X 8 HOH A 111 511 593 HOH HOH . X 8 HOH A 112 512 559 HOH HOH . X 8 HOH A 113 513 641 HOH HOH . X 8 HOH A 114 514 601 HOH HOH . X 8 HOH A 115 515 583 HOH HOH . X 8 HOH A 116 516 579 HOH HOH . X 8 HOH A 117 517 646 HOH HOH . X 8 HOH A 118 518 613 HOH HOH . X 8 HOH A 119 519 554 HOH HOH . X 8 HOH A 120 520 544 HOH HOH . X 8 HOH A 121 521 628 HOH HOH . X 8 HOH A 122 522 588 HOH HOH . X 8 HOH A 123 523 548 HOH HOH . X 8 HOH A 124 524 642 HOH HOH . X 8 HOH A 125 525 569 HOH HOH . X 8 HOH A 126 526 622 HOH HOH . X 8 HOH A 127 527 598 HOH HOH . X 8 HOH A 128 528 616 HOH HOH . X 8 HOH A 129 529 568 HOH HOH . X 8 HOH A 130 530 562 HOH HOH . X 8 HOH A 131 531 621 HOH HOH . X 8 HOH A 132 532 640 HOH HOH . X 8 HOH A 133 533 639 HOH HOH . X 8 HOH A 134 534 600 HOH HOH . X 8 HOH A 135 535 615 HOH HOH . X 8 HOH A 136 536 570 HOH HOH . X 8 HOH A 137 537 540 HOH HOH . X 8 HOH A 138 538 632 HOH HOH . X 8 HOH A 139 539 602 HOH HOH . X 8 HOH A 140 540 638 HOH HOH . X 8 HOH A 141 541 581 HOH HOH . X 8 HOH A 142 542 612 HOH HOH . X 8 HOH A 143 543 603 HOH HOH . X 8 HOH A 144 544 623 HOH HOH . X 8 HOH A 145 545 636 HOH HOH . X 8 HOH A 146 546 633 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . Q 7 -10.843 22.961 20.772 1 66.87 ? C1 GOL 316 A 1 HETATM 2 O O1 GOL . . . Q 7 -11.503 22.995 19.538 1 68.32 ? O1 GOL 316 A 1 HETATM 3 C C2 GOL . . . Q 7 -11.072 21.561 21.412 1 64.23 ? C2 GOL 316 A 1 HETATM 4 O O2 GOL . . . Q 7 -11.45 20.593 20.477 1 57.36 ? O2 GOL 316 A 1 HETATM 5 C C3 GOL . . . Q 7 -9.733 21.217 22.118 1 64.84 ? C3 GOL 316 A 1 HETATM 6 O O3 GOL . . . Q 7 -9.955 20.099 22.935 1 64.27 ? O3 GOL 316 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #