data_9IN9
#
_model_server_result.job_id            C6DFRhbbIczyMYEdskJmVA 
_model_server_result.datetime_utc      '2025-06-20 03:03:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9in9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":320}' 
#
_entry.id    9IN9 
#
_exptl.entry_id    9IN9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9IN9 
_cell.length_a            46.235 
_cell.length_b            115.755 
_cell.length_c            53.214 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9IN9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C FME 1 A FME 1 1_555 A N ASP 2 A ASP 2 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C FME 1 A FME 1 1_555 A N ASP 2 A ASP 2 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A NZ LYS 204 A LYS 204 1_555 B C15 RET . A RET 301 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.483 ? 
covale ? covale4 A NZ LYS 204 A LYS 204 1_555 B C15 RET . A RET 301 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.436 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 377 n n 
C10 C9 OLC doub 378 n n 
C10 C11 OLC sing 379 n n 
C9 C8 OLC sing 380 n n 
C17 C16 OLC sing 381 z n 
C11 C12 OLC sing 382 n n 
C8 C7 OLC sing 383 n n 
C24 C22 OLC sing 384 n n 
C24 O25 OLC sing 385 n n 
C16 C15 OLC sing 386 n n 
C12 C13 OLC sing 387 n n 
C7 C6 OLC sing 388 n n 
C15 C14 OLC sing 389 n n 
C13 C14 OLC sing 390 n n 
C6 C5 OLC sing 391 n n 
C5 C4 OLC sing 392 n n 
C4 C3 OLC sing 393 n n 
C3 C2 OLC sing 394 n n 
C2 C1 OLC sing 395 n n 
C21 C22 OLC sing 396 n n 
C21 O20 OLC sing 397 n n 
C1 O19 OLC doub 398 n n 
C1 O20 OLC sing 399 n n 
C22 O23 OLC sing 400 n n 
C18 H18 OLC sing 401 n n 
C18 H18A OLC sing 402 n n 
C18 H18B OLC sing 403 n n 
C10 H10 OLC sing 404 n n 
C9 H9 OLC sing 405 n n 
C17 H17 OLC sing 406 n n 
C17 H17A OLC sing 407 n n 
C11 H11 OLC sing 408 n n 
C11 H11A OLC sing 409 n n 
C8 H8 OLC sing 410 n n 
C8 H8A OLC sing 411 n n 
C24 H24 OLC sing 412 n n 
C24 H24A OLC sing 413 n n 
C16 H16 OLC sing 414 n n 
C16 H16A OLC sing 415 n n 
C12 H12 OLC sing 416 n n 
C12 H12A OLC sing 417 n n 
C7 H7 OLC sing 418 n n 
C7 H7A OLC sing 419 n n 
C15 H15 OLC sing 420 n n 
C15 H15A OLC sing 421 n n 
C13 H13 OLC sing 422 n n 
C13 H13A OLC sing 423 n n 
C6 H6 OLC sing 424 n n 
C6 H6A OLC sing 425 n n 
C14 H14 OLC sing 426 n n 
C14 H14A OLC sing 427 n n 
C5 H5 OLC sing 428 n n 
C5 H5A OLC sing 429 n n 
C4 H4 OLC sing 430 n n 
C4 H4A OLC sing 431 n n 
C3 H3 OLC sing 432 n n 
C3 H3A OLC sing 433 n n 
C2 H2 OLC sing 434 n n 
C2 H2A OLC sing 435 n n 
C21 H21 OLC sing 436 n n 
C21 H21A OLC sing 437 n n 
C22 H22 OLC sing 438 n n 
O25 HO25 OLC sing 439 n n 
O23 HO23 OLC sing 440 n n 
#
_atom_sites.entry_id                     9IN9 
_atom_sites.fract_transf_matrix[1][1]    0.021629 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008639 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018792 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RET A 1 301 301 RET RET . 
C 3 97N A 1 302 303 97N 97N . 
D 4 LFA A 1 303 401 LFA LFA . 
E 4 LFA A 1 304 402 LFA LFA . 
F 4 LFA A 1 305 403 LFA LFA . 
G 4 LFA A 1 306 404 LFA LFA . 
H 4 LFA A 1 307 405 LFA LFA . 
I 4 LFA A 1 308 406 LFA LFA . 
J 4 LFA A 1 309 407 LFA LFA . 
K 4 LFA A 1 310 408 LFA LFA . 
L 4 LFA A 1 311 409 LFA LFA . 
M 4 LFA A 1 312 410 LFA LFA . 
N 4 LFA A 1 313 411 LFA LFA . 
O 4 LFA A 1 314 412 LFA LFA . 
P 4 LFA A 1 315 413 LFA LFA . 
Q 4 LFA A 1 316 414 LFA LFA . 
R 4 LFA A 1 317 415 LFA LFA . 
S 4 LFA A 1 318 416 LFA LFA . 
T 5 OLC A 1 319 417 OLC OLA . 
U 5 OLC A 1 320 418 OLC OLA . 
V 5 OLC A 1 321 419 OLC OLC . 
W 5 OLC A 1 322 420 OLC OLC . 
X 4 LFA A 1 323 421 LFA LFA . 
Y 4 LFA A 1 324 422 LFA LFA . 
Z 4 LFA A 1 325 423 LFA LFA . 
AA 4 LFA A 1 326 424 LFA LFA . 
BA 6 HOH A 1 401 518 HOH HOH . 
BA 6 HOH A 2 402 522 HOH HOH . 
BA 6 HOH A 3 403 530 HOH HOH . 
BA 6 HOH A 4 404 544 HOH HOH . 
BA 6 HOH A 5 405 548 HOH HOH . 
BA 6 HOH A 6 406 573 HOH HOH . 
BA 6 HOH A 7 407 605 HOH HOH . 
BA 6 HOH A 8 408 505 HOH HOH . 
BA 6 HOH A 9 409 596 HOH HOH . 
BA 6 HOH A 10 410 574 HOH HOH . 
BA 6 HOH A 11 411 602 HOH HOH . 
BA 6 HOH A 12 412 553 HOH HOH . 
BA 6 HOH A 13 413 540 HOH HOH . 
BA 6 HOH A 14 414 504 HOH HOH . 
BA 6 HOH A 15 415 588 HOH HOH . 
BA 6 HOH A 16 416 512 HOH HOH . 
BA 6 HOH A 17 417 545 HOH HOH . 
BA 6 HOH A 18 418 523 HOH HOH . 
BA 6 HOH A 19 419 532 HOH HOH . 
BA 6 HOH A 20 420 526 HOH HOH . 
BA 6 HOH A 21 421 529 HOH HOH . 
BA 6 HOH A 22 422 536 HOH HOH . 
BA 6 HOH A 23 423 515 HOH HOH . 
BA 6 HOH A 24 424 579 HOH HOH . 
BA 6 HOH A 25 425 547 HOH HOH . 
BA 6 HOH A 26 426 577 HOH HOH . 
BA 6 HOH A 27 427 606 HOH HOH . 
BA 6 HOH A 28 428 513 HOH HOH . 
BA 6 HOH A 29 429 521 HOH HOH . 
BA 6 HOH A 30 430 550 HOH HOH . 
BA 6 HOH A 31 431 567 HOH HOH . 
BA 6 HOH A 32 432 561 HOH HOH . 
BA 6 HOH A 33 433 520 HOH HOH . 
BA 6 HOH A 34 434 570 HOH HOH . 
BA 6 HOH A 35 435 552 HOH HOH . 
BA 6 HOH A 36 436 527 HOH HOH . 
BA 6 HOH A 37 437 506 HOH HOH . 
BA 6 HOH A 38 438 594 HOH HOH . 
BA 6 HOH A 39 439 507 HOH HOH . 
BA 6 HOH A 40 440 514 HOH HOH . 
BA 6 HOH A 41 441 560 HOH HOH . 
BA 6 HOH A 42 442 580 HOH HOH . 
BA 6 HOH A 43 443 502 HOH HOH . 
BA 6 HOH A 44 444 534 HOH HOH . 
BA 6 HOH A 45 445 537 HOH HOH . 
BA 6 HOH A 46 446 556 HOH HOH . 
BA 6 HOH A 47 447 555 HOH HOH . 
BA 6 HOH A 48 448 525 HOH HOH . 
BA 6 HOH A 49 449 542 HOH HOH . 
BA 6 HOH A 50 450 510 HOH HOH . 
BA 6 HOH A 51 451 539 HOH HOH . 
BA 6 HOH A 52 452 564 HOH HOH . 
BA 6 HOH A 53 453 528 HOH HOH . 
BA 6 HOH A 54 454 503 HOH HOH . 
BA 6 HOH A 55 455 546 HOH HOH . 
BA 6 HOH A 56 456 563 HOH HOH . 
BA 6 HOH A 57 457 519 HOH HOH . 
BA 6 HOH A 58 458 609 HOH HOH . 
BA 6 HOH A 59 459 535 HOH HOH . 
BA 6 HOH A 60 460 589 HOH HOH . 
BA 6 HOH A 61 461 595 HOH HOH . 
BA 6 HOH A 62 462 543 HOH HOH . 
BA 6 HOH A 63 463 549 HOH HOH . 
BA 6 HOH A 64 464 516 HOH HOH . 
BA 6 HOH A 65 465 583 HOH HOH . 
BA 6 HOH A 66 466 610 HOH HOH . 
BA 6 HOH A 67 467 509 HOH HOH . 
BA 6 HOH A 68 468 599 HOH HOH . 
BA 6 HOH A 69 469 558 HOH HOH . 
BA 6 HOH A 70 470 593 HOH HOH . 
BA 6 HOH A 71 471 575 HOH HOH . 
BA 6 HOH A 72 472 541 HOH HOH . 
BA 6 HOH A 73 473 517 HOH HOH . 
BA 6 HOH A 74 474 601 HOH HOH . 
BA 6 HOH A 75 475 557 HOH HOH . 
BA 6 HOH A 76 476 586 HOH HOH . 
BA 6 HOH A 77 477 554 HOH HOH . 
BA 6 HOH A 78 478 538 HOH HOH . 
BA 6 HOH A 79 479 508 HOH HOH . 
BA 6 HOH A 80 480 578 HOH HOH . 
BA 6 HOH A 81 481 597 HOH HOH . 
BA 6 HOH A 82 482 608 HOH HOH . 
BA 6 HOH A 83 483 568 HOH HOH . 
BA 6 HOH A 84 484 600 HOH HOH . 
BA 6 HOH A 85 485 598 HOH HOH . 
BA 6 HOH A 86 486 524 HOH HOH . 
BA 6 HOH A 87 487 571 HOH HOH . 
BA 6 HOH A 88 488 566 HOH HOH . 
BA 6 HOH A 89 489 501 HOH HOH . 
BA 6 HOH A 90 490 565 HOH HOH . 
BA 6 HOH A 91 491 562 HOH HOH . 
BA 6 HOH A 92 492 511 HOH HOH . 
BA 6 HOH A 93 493 572 HOH HOH . 
BA 6 HOH A 94 494 584 HOH HOH . 
BA 6 HOH A 95 495 559 HOH HOH . 
BA 6 HOH A 96 496 592 HOH HOH . 
BA 6 HOH A 97 497 581 HOH HOH . 
BA 6 HOH A 98 498 551 HOH HOH . 
BA 6 HOH A 99 499 607 HOH HOH . 
BA 6 HOH A 100 500 569 HOH HOH . 
BA 6 HOH A 101 501 587 HOH HOH . 
BA 6 HOH A 102 502 582 HOH HOH . 
BA 6 HOH A 103 503 533 HOH HOH . 
BA 6 HOH A 104 504 611 HOH HOH . 
BA 6 HOH A 105 505 604 HOH HOH . 
BA 6 HOH A 106 506 531 HOH HOH . 
BA 6 HOH A 107 507 603 HOH HOH . 
BA 6 HOH A 108 508 576 HOH HOH . 
BA 6 HOH A 109 509 585 HOH HOH . 
BA 6 HOH A 110 510 591 HOH HOH . 
BA 6 HOH A 111 511 590 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C3 OLC . . . U 5 0.007 -0.355 -13.118 0.5 43.42 ? C3 OLC 320 A 1 
HETATM 2 C C2 OLC . . . U 5 -0.535 0.589 -14.147 0.5 46.78 ? C2 OLC 320 A 1 
HETATM 3 C C1 OLC . . . U 5 -0.291 0.176 -15.588 0.5 55.98 ? C1 OLC 320 A 1 
HETATM 4 O O19 OLC . . . U 5 0.33 0.966 -16.333 0.5 58.56 ? O19 OLC 320 A 1 
HETATM 5 O O20 OLC . . . U 5 -0.718 -0.938 -15.962 0.5 58.24 ? O20 OLC 320 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#