data_9IQB # _model_server_result.job_id bMiBwkiF10LIaQGeGYVdqA _model_server_result.datetime_utc '2025-01-15 14:00:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9iqb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":501}' # _entry.id 9IQB # _exptl.entry_id 9IQB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 60.118 _cell.angle_beta 88.192 _cell.angle_gamma 87.478 _cell.entry_id 9IQB _cell.length_a 109.93 _cell.length_b 158.62 _cell.length_c 158.91 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9IQB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 9IQB _atom_sites.fract_transf_matrix[1][1] 0.009097 _atom_sites.fract_transf_matrix[1][2] -0.000401 _atom_sites.fract_transf_matrix[1][3] -0.000101 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00631 _atom_sites.fract_transf_matrix[2][3] -0.00362 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 TRS A 1 501 501 TRS TRS . N 2 TRS B 1 501 501 TRS TRS . O 3 HOH A 1 601 133 HOH HOH . O 3 HOH A 2 602 151 HOH HOH . O 3 HOH A 3 603 130 HOH HOH . O 3 HOH A 4 604 65 HOH HOH . O 3 HOH A 5 605 14 HOH HOH . O 3 HOH A 6 606 275 HOH HOH . O 3 HOH A 7 607 291 HOH HOH . O 3 HOH A 8 608 174 HOH HOH . O 3 HOH A 9 609 282 HOH HOH . O 3 HOH A 10 610 224 HOH HOH . O 3 HOH A 11 611 259 HOH HOH . O 3 HOH A 12 612 2 HOH HOH . O 3 HOH A 13 613 148 HOH HOH . O 3 HOH A 14 614 18 HOH HOH . O 3 HOH A 15 615 84 HOH HOH . O 3 HOH A 16 616 20 HOH HOH . O 3 HOH A 17 617 142 HOH HOH . O 3 HOH A 18 618 222 HOH HOH . O 3 HOH A 19 619 156 HOH HOH . O 3 HOH A 20 620 225 HOH HOH . O 3 HOH A 21 621 80 HOH HOH . O 3 HOH A 22 622 334 HOH HOH . O 3 HOH A 23 623 300 HOH HOH . O 3 HOH A 24 624 303 HOH HOH . P 3 HOH B 1 601 337 HOH HOH . P 3 HOH B 2 602 283 HOH HOH . P 3 HOH B 3 603 298 HOH HOH . P 3 HOH B 4 604 284 HOH HOH . P 3 HOH B 5 605 159 HOH HOH . P 3 HOH B 6 606 229 HOH HOH . P 3 HOH B 7 607 102 HOH HOH . P 3 HOH B 8 608 42 HOH HOH . P 3 HOH B 9 609 205 HOH HOH . P 3 HOH B 10 610 105 HOH HOH . P 3 HOH B 11 611 273 HOH HOH . P 3 HOH B 12 612 256 HOH HOH . P 3 HOH B 13 613 177 HOH HOH . P 3 HOH B 14 614 162 HOH HOH . P 3 HOH B 15 615 158 HOH HOH . P 3 HOH B 16 616 200 HOH HOH . P 3 HOH B 17 617 271 HOH HOH . P 3 HOH B 18 618 85 HOH HOH . P 3 HOH B 19 619 50 HOH HOH . P 3 HOH B 20 620 113 HOH HOH . P 3 HOH B 21 621 244 HOH HOH . P 3 HOH B 22 622 176 HOH HOH . P 3 HOH B 23 623 78 HOH HOH . P 3 HOH B 24 624 248 HOH HOH . P 3 HOH B 25 625 54 HOH HOH . P 3 HOH B 26 626 171 HOH HOH . P 3 HOH B 27 627 253 HOH HOH . P 3 HOH B 28 628 144 HOH HOH . P 3 HOH B 29 629 16 HOH HOH . P 3 HOH B 30 630 167 HOH HOH . P 3 HOH B 31 631 147 HOH HOH . P 3 HOH B 32 632 24 HOH HOH . P 3 HOH B 33 633 155 HOH HOH . P 3 HOH B 34 634 122 HOH HOH . P 3 HOH B 35 635 114 HOH HOH . P 3 HOH B 36 636 336 HOH HOH . P 3 HOH B 37 637 180 HOH HOH . P 3 HOH B 38 638 310 HOH HOH . Q 3 HOH C 1 501 92 HOH HOH . Q 3 HOH C 2 502 327 HOH HOH . Q 3 HOH C 3 503 110 HOH HOH . Q 3 HOH C 4 504 47 HOH HOH . Q 3 HOH C 5 505 97 HOH HOH . Q 3 HOH C 6 506 185 HOH HOH . Q 3 HOH C 7 507 61 HOH HOH . Q 3 HOH C 8 508 137 HOH HOH . Q 3 HOH C 9 509 326 HOH HOH . Q 3 HOH C 10 510 57 HOH HOH . Q 3 HOH C 11 511 270 HOH HOH . Q 3 HOH C 12 512 241 HOH HOH . Q 3 HOH C 13 513 226 HOH HOH . Q 3 HOH C 14 514 141 HOH HOH . Q 3 HOH C 15 515 165 HOH HOH . Q 3 HOH C 16 516 139 HOH HOH . Q 3 HOH C 17 517 12 HOH HOH . Q 3 HOH C 18 518 107 HOH HOH . Q 3 HOH C 19 519 88 HOH HOH . Q 3 HOH C 20 520 285 HOH HOH . Q 3 HOH C 21 521 149 HOH HOH . Q 3 HOH C 22 522 341 HOH HOH . Q 3 HOH C 23 523 112 HOH HOH . Q 3 HOH C 24 524 338 HOH HOH . Q 3 HOH C 25 525 339 HOH HOH . Q 3 HOH C 26 526 340 HOH HOH . Q 3 HOH C 27 527 328 HOH HOH . R 3 HOH D 1 501 193 HOH HOH . R 3 HOH D 2 502 32 HOH HOH . R 3 HOH D 3 503 8 HOH HOH . R 3 HOH D 4 504 168 HOH HOH . R 3 HOH D 5 505 311 HOH HOH . R 3 HOH D 6 506 45 HOH HOH . R 3 HOH D 7 507 100 HOH HOH . R 3 HOH D 8 508 234 HOH HOH . R 3 HOH D 9 509 296 HOH HOH . R 3 HOH D 10 510 121 HOH HOH . R 3 HOH D 11 511 23 HOH HOH . R 3 HOH D 12 512 93 HOH HOH . R 3 HOH D 13 513 305 HOH HOH . R 3 HOH D 14 514 109 HOH HOH . R 3 HOH D 15 515 304 HOH HOH . R 3 HOH D 16 516 201 HOH HOH . R 3 HOH D 17 517 119 HOH HOH . R 3 HOH D 18 518 161 HOH HOH . R 3 HOH D 19 519 48 HOH HOH . R 3 HOH D 20 520 212 HOH HOH . R 3 HOH D 21 521 267 HOH HOH . R 3 HOH D 22 522 71 HOH HOH . R 3 HOH D 23 523 342 HOH HOH . R 3 HOH D 24 524 314 HOH HOH . R 3 HOH D 25 525 25 HOH HOH . R 3 HOH D 26 526 312 HOH HOH . R 3 HOH D 27 527 6 HOH HOH . R 3 HOH D 28 528 313 HOH HOH . R 3 HOH D 29 529 343 HOH HOH . S 3 HOH E 1 501 186 HOH HOH . S 3 HOH E 2 502 145 HOH HOH . S 3 HOH E 3 503 43 HOH HOH . S 3 HOH E 4 504 268 HOH HOH . S 3 HOH E 5 505 289 HOH HOH . S 3 HOH E 6 506 315 HOH HOH . S 3 HOH E 7 507 58 HOH HOH . S 3 HOH E 8 508 83 HOH HOH . S 3 HOH E 9 509 94 HOH HOH . S 3 HOH E 10 510 51 HOH HOH . S 3 HOH E 11 511 278 HOH HOH . S 3 HOH E 12 512 173 HOH HOH . S 3 HOH E 13 513 129 HOH HOH . S 3 HOH E 14 514 69 HOH HOH . S 3 HOH E 15 515 10 HOH HOH . S 3 HOH E 16 516 189 HOH HOH . S 3 HOH E 17 517 216 HOH HOH . S 3 HOH E 18 518 11 HOH HOH . S 3 HOH E 19 519 335 HOH HOH . S 3 HOH E 20 520 49 HOH HOH . S 3 HOH E 21 521 4 HOH HOH . S 3 HOH E 22 522 169 HOH HOH . S 3 HOH E 23 523 316 HOH HOH . S 3 HOH E 24 524 269 HOH HOH . S 3 HOH E 25 525 279 HOH HOH . S 3 HOH E 26 526 317 HOH HOH . T 3 HOH F 1 501 228 HOH HOH . T 3 HOH F 2 502 231 HOH HOH . T 3 HOH F 3 503 254 HOH HOH . T 3 HOH F 4 504 53 HOH HOH . T 3 HOH F 5 505 184 HOH HOH . T 3 HOH F 6 506 96 HOH HOH . T 3 HOH F 7 507 245 HOH HOH . T 3 HOH F 8 508 230 HOH HOH . T 3 HOH F 9 509 115 HOH HOH . T 3 HOH F 10 510 39 HOH HOH . T 3 HOH F 11 511 106 HOH HOH . T 3 HOH F 12 512 252 HOH HOH . T 3 HOH F 13 513 103 HOH HOH . T 3 HOH F 14 514 293 HOH HOH . T 3 HOH F 15 515 260 HOH HOH . T 3 HOH F 16 516 37 HOH HOH . T 3 HOH F 17 517 91 HOH HOH . T 3 HOH F 18 518 329 HOH HOH . T 3 HOH F 19 519 74 HOH HOH . T 3 HOH F 20 520 292 HOH HOH . T 3 HOH F 21 521 46 HOH HOH . T 3 HOH F 22 522 104 HOH HOH . T 3 HOH F 23 523 344 HOH HOH . T 3 HOH F 24 524 34 HOH HOH . U 3 HOH G 1 501 9 HOH HOH . U 3 HOH G 2 502 44 HOH HOH . U 3 HOH G 3 503 82 HOH HOH . U 3 HOH G 4 504 190 HOH HOH . U 3 HOH G 5 505 217 HOH HOH . U 3 HOH G 6 506 164 HOH HOH . U 3 HOH G 7 507 320 HOH HOH . U 3 HOH G 8 508 153 HOH HOH . U 3 HOH G 9 509 17 HOH HOH . U 3 HOH G 10 510 30 HOH HOH . U 3 HOH G 11 511 136 HOH HOH . U 3 HOH G 12 512 302 HOH HOH . U 3 HOH G 13 513 86 HOH HOH . U 3 HOH G 14 514 238 HOH HOH . U 3 HOH G 15 515 1 HOH HOH . U 3 HOH G 16 516 255 HOH HOH . U 3 HOH G 17 517 52 HOH HOH . U 3 HOH G 18 518 28 HOH HOH . U 3 HOH G 19 519 203 HOH HOH . U 3 HOH G 20 520 299 HOH HOH . U 3 HOH G 21 521 138 HOH HOH . U 3 HOH G 22 522 7 HOH HOH . U 3 HOH G 23 523 319 HOH HOH . V 3 HOH H 1 501 60 HOH HOH . V 3 HOH H 2 502 250 HOH HOH . V 3 HOH H 3 503 297 HOH HOH . V 3 HOH H 4 504 59 HOH HOH . V 3 HOH H 5 505 98 HOH HOH . V 3 HOH H 6 506 288 HOH HOH . V 3 HOH H 7 507 276 HOH HOH . V 3 HOH H 8 508 194 HOH HOH . V 3 HOH H 9 509 120 HOH HOH . V 3 HOH H 10 510 286 HOH HOH . V 3 HOH H 11 511 62 HOH HOH . V 3 HOH H 12 512 5 HOH HOH . V 3 HOH H 13 513 346 HOH HOH . V 3 HOH H 14 514 187 HOH HOH . V 3 HOH H 15 515 124 HOH HOH . V 3 HOH H 16 516 345 HOH HOH . V 3 HOH H 17 517 330 HOH HOH . W 3 HOH I 1 501 131 HOH HOH . W 3 HOH I 2 502 277 HOH HOH . W 3 HOH I 3 503 135 HOH HOH . W 3 HOH I 4 504 331 HOH HOH . W 3 HOH I 5 505 262 HOH HOH . W 3 HOH I 6 506 182 HOH HOH . W 3 HOH I 7 507 75 HOH HOH . W 3 HOH I 8 508 125 HOH HOH . W 3 HOH I 9 509 89 HOH HOH . W 3 HOH I 10 510 280 HOH HOH . W 3 HOH I 11 511 188 HOH HOH . W 3 HOH I 12 512 55 HOH HOH . W 3 HOH I 13 513 265 HOH HOH . W 3 HOH I 14 514 195 HOH HOH . W 3 HOH I 15 515 350 HOH HOH . W 3 HOH I 16 516 95 HOH HOH . W 3 HOH I 17 517 170 HOH HOH . W 3 HOH I 18 518 77 HOH HOH . W 3 HOH I 19 519 249 HOH HOH . W 3 HOH I 20 520 197 HOH HOH . W 3 HOH I 21 521 274 HOH HOH . W 3 HOH I 22 522 348 HOH HOH . W 3 HOH I 23 523 349 HOH HOH . W 3 HOH I 24 524 351 HOH HOH . W 3 HOH I 25 525 192 HOH HOH . X 3 HOH J 1 501 307 HOH HOH . X 3 HOH J 2 502 247 HOH HOH . X 3 HOH J 3 503 294 HOH HOH . X 3 HOH J 4 504 22 HOH HOH . X 3 HOH J 5 505 221 HOH HOH . X 3 HOH J 6 506 140 HOH HOH . X 3 HOH J 7 507 308 HOH HOH . X 3 HOH J 8 508 118 HOH HOH . X 3 HOH J 9 509 68 HOH HOH . X 3 HOH J 10 510 198 HOH HOH . X 3 HOH J 11 511 214 HOH HOH . X 3 HOH J 12 512 272 HOH HOH . X 3 HOH J 13 513 181 HOH HOH . X 3 HOH J 14 514 99 HOH HOH . X 3 HOH J 15 515 90 HOH HOH . X 3 HOH J 16 516 108 HOH HOH . X 3 HOH J 17 517 63 HOH HOH . X 3 HOH J 18 518 321 HOH HOH . X 3 HOH J 19 519 64 HOH HOH . X 3 HOH J 20 520 258 HOH HOH . X 3 HOH J 21 521 73 HOH HOH . X 3 HOH J 22 522 246 HOH HOH . X 3 HOH J 23 523 35 HOH HOH . X 3 HOH J 24 524 332 HOH HOH . X 3 HOH J 25 525 309 HOH HOH . Y 3 HOH K 1 501 204 HOH HOH . Y 3 HOH K 2 502 166 HOH HOH . Y 3 HOH K 3 503 353 HOH HOH . Y 3 HOH K 4 504 38 HOH HOH . Y 3 HOH K 5 505 150 HOH HOH . Y 3 HOH K 6 506 79 HOH HOH . Y 3 HOH K 7 507 322 HOH HOH . Y 3 HOH K 8 508 154 HOH HOH . Y 3 HOH K 9 509 237 HOH HOH . Y 3 HOH K 10 510 306 HOH HOH . Y 3 HOH K 11 511 101 HOH HOH . Y 3 HOH K 12 512 208 HOH HOH . Y 3 HOH K 13 513 209 HOH HOH . Y 3 HOH K 14 514 21 HOH HOH . Y 3 HOH K 15 515 3 HOH HOH . Y 3 HOH K 16 516 227 HOH HOH . Y 3 HOH K 17 517 211 HOH HOH . Y 3 HOH K 18 518 27 HOH HOH . Y 3 HOH K 19 519 235 HOH HOH . Y 3 HOH K 20 520 13 HOH HOH . Y 3 HOH K 21 521 323 HOH HOH . Y 3 HOH K 22 522 160 HOH HOH . Y 3 HOH K 23 523 218 HOH HOH . Y 3 HOH K 24 524 354 HOH HOH . Y 3 HOH K 25 525 116 HOH HOH . Y 3 HOH K 26 526 333 HOH HOH . Y 3 HOH K 27 527 352 HOH HOH . Z 3 HOH L 1 501 111 HOH HOH . Z 3 HOH L 2 502 67 HOH HOH . Z 3 HOH L 3 503 143 HOH HOH . Z 3 HOH L 4 504 76 HOH HOH . Z 3 HOH L 5 505 157 HOH HOH . Z 3 HOH L 6 506 264 HOH HOH . Z 3 HOH L 7 507 325 HOH HOH . Z 3 HOH L 8 508 183 HOH HOH . Z 3 HOH L 9 509 134 HOH HOH . Z 3 HOH L 10 510 347 HOH HOH . Z 3 HOH L 11 511 26 HOH HOH . Z 3 HOH L 12 512 240 HOH HOH . Z 3 HOH L 13 513 40 HOH HOH . Z 3 HOH L 14 514 215 HOH HOH . Z 3 HOH L 15 515 355 HOH HOH . Z 3 HOH L 16 516 152 HOH HOH . Z 3 HOH L 17 517 324 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . N 2 73.694 9.105 -5.801 1 23.83 ? C TRS 501 B 1 HETATM 2 C C1 TRS . . . N 2 74.962 9.57 -5.098 1 24.15 ? C1 TRS 501 B 1 HETATM 3 C C2 TRS . . . N 2 73.804 9.434 -7.284 1 23.47 ? C2 TRS 501 B 1 HETATM 4 C C3 TRS . . . N 2 73.505 7.599 -5.61 1 22.93 ? C3 TRS 501 B 1 HETATM 5 N N TRS . . . N 2 72.53 9.848 -5.198 1 24.27 ? N TRS 501 B 1 HETATM 6 O O1 TRS . . . N 2 76.068 8.762 -5.46 1 24.94 ? O1 TRS 501 B 1 HETATM 7 O O2 TRS . . . N 2 75.13 9.259 -7.763 1 22.37 ? O2 TRS 501 B 1 HETATM 8 O O3 TRS . . . N 2 72.292 7.085 -6.144 1 21.43 ? O3 TRS 501 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 116 _model_server_stats.create_model_time_ms 344 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #