data_9IT6 # _model_server_result.job_id dV0nHricaimukVn0jFPLKA _model_server_result.datetime_utc '2025-01-09 18:25:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9it6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 9IT6 # _exptl.entry_id 9IT6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 491.849 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S})-2-[[4-[[2,4-bis(azanyl)-6-oxidanylidene-1~{H}-pyrimidin-5-yl]carbamoylamino]-3-chloranyl-phenyl]carbonylamino]-4-(1~{H}-1,2,3,4-tetrazol-5-yl)butanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9IT6 _cell.length_a 114.849 _cell.length_b 114.849 _cell.length_c 113.413 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9IT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C17 H18 Cl N11 O5' _chem_comp.formula_weight 491.849 _chem_comp.id A1L24 _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S})-2-[[4-[[2,4-bis(azanyl)-6-oxidanylidene-1~{H}-pyrimidin-5-yl]carbamoylamino]-3-chloranyl-phenyl]carbonylamino]-4-(1~{H}-1,2,3,4-tetrazol-5-yl)butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C22 A1L24 doub 1 n n N31 N30 A1L24 sing 2 n y N31 C27 A1L24 doub 3 n y N30 N29 A1L24 doub 4 n y C22 C21 A1L24 sing 5 n n C22 O24 A1L24 sing 6 n n C23 C21 A1L24 sing 7 n n C23 C26 A1L24 sing 8 n n C21 N20 A1L24 sing 9 n n C27 C26 A1L24 sing 10 n n C27 N28 A1L24 sing 11 n y N29 N28 A1L24 sing 12 n y N20 C18 A1L24 sing 13 n n O19 C18 A1L24 doub 14 n n C18 C15 A1L24 sing 15 n n C15 C16 A1L24 sing 16 n y C15 C14 A1L24 doub 17 n y C16 C17 A1L24 doub 18 n y C14 C13 A1L24 sing 19 n y C17 C10 A1L24 sing 20 n y C17 CL32 A1L24 sing 21 n n C13 C10 A1L24 doub 22 n y C10 N09 A1L24 sing 23 n n N09 C08 A1L24 sing 24 n n O12 C08 A1L24 doub 25 n n C08 N07 A1L24 sing 26 n n N07 C05 A1L24 sing 27 n n O33 C06 A1L24 doub 28 n n C06 C05 A1L24 sing 29 n n C06 N01 A1L24 sing 30 n n C05 C04 A1L24 doub 31 n n N01 C02 A1L24 sing 32 n n C04 N11 A1L24 sing 33 n n C04 N03 A1L24 sing 34 n n C02 N03 A1L24 doub 35 n n C02 N34 A1L24 sing 36 n n C13 H1 A1L24 sing 37 n n C21 H2 A1L24 sing 38 n n C26 H3 A1L24 sing 39 n n C26 H4 A1L24 sing 40 n n C14 H6 A1L24 sing 41 n n C16 H7 A1L24 sing 42 n n C23 H8 A1L24 sing 43 n n C23 H9 A1L24 sing 44 n n N07 H10 A1L24 sing 45 n n N09 H11 A1L24 sing 46 n n N11 H12 A1L24 sing 47 n n N11 H13 A1L24 sing 48 n n N20 H14 A1L24 sing 49 n n N28 H15 A1L24 sing 50 n n N34 H16 A1L24 sing 51 n n N34 H17 A1L24 sing 52 n n O24 H18 A1L24 sing 53 n n N01 H5 A1L24 sing 54 n n # _atom_sites.entry_id 9IT6 _atom_sites.fract_transf_matrix[1][1] 0.008707 _atom_sites.fract_transf_matrix[1][2] 0.005027 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1L24 A 1 401 401 A1L24 LIG . D 3 NAD A 1 402 501 NAD NAD . E 4 PO4 A 1 403 1 PO4 PO4 . F 4 PO4 A 1 404 2 PO4 PO4 . G 2 A1L24 B 1 401 401 A1L24 LIG . H 3 NAD B 1 402 501 NAD NAD . I 5 HOH A 1 501 106 HOH HOH . I 5 HOH A 2 502 12 HOH HOH . I 5 HOH A 3 503 81 HOH HOH . I 5 HOH A 4 504 130 HOH HOH . I 5 HOH A 5 505 48 HOH HOH . I 5 HOH A 6 506 42 HOH HOH . I 5 HOH A 7 507 67 HOH HOH . I 5 HOH A 8 508 165 HOH HOH . I 5 HOH A 9 509 77 HOH HOH . I 5 HOH A 10 510 63 HOH HOH . I 5 HOH A 11 511 65 HOH HOH . I 5 HOH A 12 512 71 HOH HOH . I 5 HOH A 13 513 147 HOH HOH . I 5 HOH A 14 514 133 HOH HOH . I 5 HOH A 15 515 45 HOH HOH . I 5 HOH A 16 516 168 HOH HOH . I 5 HOH A 17 517 39 HOH HOH . I 5 HOH A 18 518 36 HOH HOH . I 5 HOH A 19 519 121 HOH HOH . I 5 HOH A 20 520 2 HOH HOH . I 5 HOH A 21 521 5 HOH HOH . I 5 HOH A 22 522 181 HOH HOH . I 5 HOH A 23 523 66 HOH HOH . I 5 HOH A 24 524 31 HOH HOH . I 5 HOH A 25 525 78 HOH HOH . I 5 HOH A 26 526 10 HOH HOH . I 5 HOH A 27 527 21 HOH HOH . I 5 HOH A 28 528 175 HOH HOH . I 5 HOH A 29 529 140 HOH HOH . I 5 HOH A 30 530 160 HOH HOH . I 5 HOH A 31 531 101 HOH HOH . I 5 HOH A 32 532 145 HOH HOH . I 5 HOH A 33 533 158 HOH HOH . I 5 HOH A 34 534 185 HOH HOH . I 5 HOH A 35 535 52 HOH HOH . I 5 HOH A 36 536 23 HOH HOH . I 5 HOH A 37 537 68 HOH HOH . I 5 HOH A 38 538 144 HOH HOH . I 5 HOH A 39 539 14 HOH HOH . I 5 HOH A 40 540 108 HOH HOH . I 5 HOH A 41 541 54 HOH HOH . I 5 HOH A 42 542 33 HOH HOH . I 5 HOH A 43 543 18 HOH HOH . I 5 HOH A 44 544 72 HOH HOH . I 5 HOH A 45 545 11 HOH HOH . I 5 HOH A 46 546 122 HOH HOH . I 5 HOH A 47 547 58 HOH HOH . I 5 HOH A 48 548 76 HOH HOH . I 5 HOH A 49 549 3 HOH HOH . I 5 HOH A 50 550 29 HOH HOH . I 5 HOH A 51 551 154 HOH HOH . I 5 HOH A 52 552 15 HOH HOH . I 5 HOH A 53 553 60 HOH HOH . I 5 HOH A 54 554 40 HOH HOH . I 5 HOH A 55 555 171 HOH HOH . I 5 HOH A 56 556 178 HOH HOH . I 5 HOH A 57 557 24 HOH HOH . I 5 HOH A 58 558 162 HOH HOH . I 5 HOH A 59 559 110 HOH HOH . I 5 HOH A 60 560 28 HOH HOH . I 5 HOH A 61 561 109 HOH HOH . I 5 HOH A 62 562 37 HOH HOH . I 5 HOH A 63 563 91 HOH HOH . I 5 HOH A 64 564 75 HOH HOH . I 5 HOH A 65 565 142 HOH HOH . I 5 HOH A 66 566 9 HOH HOH . I 5 HOH A 67 567 150 HOH HOH . I 5 HOH A 68 568 180 HOH HOH . I 5 HOH A 69 569 141 HOH HOH . I 5 HOH A 70 570 7 HOH HOH . I 5 HOH A 71 571 125 HOH HOH . I 5 HOH A 72 572 148 HOH HOH . I 5 HOH A 73 573 88 HOH HOH . I 5 HOH A 74 574 49 HOH HOH . I 5 HOH A 75 575 124 HOH HOH . I 5 HOH A 76 576 41 HOH HOH . I 5 HOH A 77 577 83 HOH HOH . I 5 HOH A 78 578 20 HOH HOH . I 5 HOH A 79 579 89 HOH HOH . I 5 HOH A 80 580 90 HOH HOH . I 5 HOH A 81 581 47 HOH HOH . I 5 HOH A 82 582 79 HOH HOH . I 5 HOH A 83 583 143 HOH HOH . I 5 HOH A 84 584 184 HOH HOH . I 5 HOH A 85 585 132 HOH HOH . I 5 HOH A 86 586 98 HOH HOH . I 5 HOH A 87 587 96 HOH HOH . I 5 HOH A 88 588 183 HOH HOH . I 5 HOH A 89 589 187 HOH HOH . I 5 HOH A 90 590 74 HOH HOH . I 5 HOH A 91 591 93 HOH HOH . I 5 HOH A 92 592 126 HOH HOH . I 5 HOH A 93 593 80 HOH HOH . I 5 HOH A 94 594 163 HOH HOH . I 5 HOH A 95 595 159 HOH HOH . I 5 HOH A 96 596 151 HOH HOH . I 5 HOH A 97 597 174 HOH HOH . I 5 HOH A 98 598 164 HOH HOH . I 5 HOH A 99 599 44 HOH HOH . I 5 HOH A 100 600 59 HOH HOH . I 5 HOH A 101 601 64 HOH HOH . I 5 HOH A 102 602 114 HOH HOH . I 5 HOH A 103 603 138 HOH HOH . J 5 HOH B 1 501 19 HOH HOH . J 5 HOH B 2 502 111 HOH HOH . J 5 HOH B 3 503 82 HOH HOH . J 5 HOH B 4 504 97 HOH HOH . J 5 HOH B 5 505 55 HOH HOH . J 5 HOH B 6 506 57 HOH HOH . J 5 HOH B 7 507 120 HOH HOH . J 5 HOH B 8 508 92 HOH HOH . J 5 HOH B 9 509 26 HOH HOH . J 5 HOH B 10 510 56 HOH HOH . J 5 HOH B 11 511 30 HOH HOH . J 5 HOH B 12 512 179 HOH HOH . J 5 HOH B 13 513 135 HOH HOH . J 5 HOH B 14 514 123 HOH HOH . J 5 HOH B 15 515 4 HOH HOH . J 5 HOH B 16 516 84 HOH HOH . J 5 HOH B 17 517 85 HOH HOH . J 5 HOH B 18 518 32 HOH HOH . J 5 HOH B 19 519 153 HOH HOH . J 5 HOH B 20 520 61 HOH HOH . J 5 HOH B 21 521 177 HOH HOH . J 5 HOH B 22 522 53 HOH HOH . J 5 HOH B 23 523 112 HOH HOH . J 5 HOH B 24 524 99 HOH HOH . J 5 HOH B 25 525 94 HOH HOH . J 5 HOH B 26 526 46 HOH HOH . J 5 HOH B 27 527 22 HOH HOH . J 5 HOH B 28 528 100 HOH HOH . J 5 HOH B 29 529 166 HOH HOH . J 5 HOH B 30 530 127 HOH HOH . J 5 HOH B 31 531 50 HOH HOH . J 5 HOH B 32 532 117 HOH HOH . J 5 HOH B 33 533 134 HOH HOH . J 5 HOH B 34 534 43 HOH HOH . J 5 HOH B 35 535 17 HOH HOH . J 5 HOH B 36 536 8 HOH HOH . J 5 HOH B 37 537 169 HOH HOH . J 5 HOH B 38 538 87 HOH HOH . J 5 HOH B 39 539 6 HOH HOH . J 5 HOH B 40 540 73 HOH HOH . J 5 HOH B 41 541 157 HOH HOH . J 5 HOH B 42 542 156 HOH HOH . J 5 HOH B 43 543 137 HOH HOH . J 5 HOH B 44 544 103 HOH HOH . J 5 HOH B 45 545 136 HOH HOH . J 5 HOH B 46 546 95 HOH HOH . J 5 HOH B 47 547 62 HOH HOH . J 5 HOH B 48 548 38 HOH HOH . J 5 HOH B 49 549 152 HOH HOH . J 5 HOH B 50 550 1 HOH HOH . J 5 HOH B 51 551 34 HOH HOH . J 5 HOH B 52 552 51 HOH HOH . J 5 HOH B 53 553 129 HOH HOH . J 5 HOH B 54 554 102 HOH HOH . J 5 HOH B 55 555 149 HOH HOH . J 5 HOH B 56 556 113 HOH HOH . J 5 HOH B 57 557 25 HOH HOH . J 5 HOH B 58 558 104 HOH HOH . J 5 HOH B 59 559 118 HOH HOH . J 5 HOH B 60 560 167 HOH HOH . J 5 HOH B 61 561 13 HOH HOH . J 5 HOH B 62 562 186 HOH HOH . J 5 HOH B 63 563 119 HOH HOH . J 5 HOH B 64 564 173 HOH HOH . J 5 HOH B 65 565 128 HOH HOH . J 5 HOH B 66 566 86 HOH HOH . J 5 HOH B 67 567 176 HOH HOH . J 5 HOH B 68 568 70 HOH HOH . J 5 HOH B 69 569 16 HOH HOH . J 5 HOH B 70 570 35 HOH HOH . J 5 HOH B 71 571 172 HOH HOH . J 5 HOH B 72 572 69 HOH HOH . J 5 HOH B 73 573 139 HOH HOH . J 5 HOH B 74 574 131 HOH HOH . J 5 HOH B 75 575 182 HOH HOH . J 5 HOH B 76 576 146 HOH HOH . J 5 HOH B 77 577 155 HOH HOH . J 5 HOH B 78 578 27 HOH HOH . J 5 HOH B 79 579 161 HOH HOH . J 5 HOH B 80 580 107 HOH HOH . J 5 HOH B 81 581 188 HOH HOH . J 5 HOH B 82 582 115 HOH HOH . J 5 HOH B 83 583 105 HOH HOH . J 5 HOH B 84 584 170 HOH HOH . J 5 HOH B 85 585 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1L24 . . . C 2 -50.851 32.423 17.746 1 36.1 ? C10 A1L24 401 A 1 HETATM 2 C C13 A1L24 . . . C 2 -51.271 32.985 18.944 1 35.09 ? C13 A1L24 401 A 1 HETATM 3 C C15 A1L24 . . . C 2 -52.038 30.819 19.624 1 39.58 ? C15 A1L24 401 A 1 HETATM 4 C C17 A1L24 . . . C 2 -50.989 31.073 17.502 1 37.95 ? C17 A1L24 401 A 1 HETATM 5 C C21 A1L24 . . . C 2 -52.927 27.634 21.607 1 44.21 ? C21 A1L24 401 A 1 HETATM 6 C C22 A1L24 . . . C 2 -51.999 26.428 21.621 1 41.71 ? C22 A1L24 401 A 1 HETATM 7 C C26 A1L24 . . . C 2 -54.49 26.333 20.118 1 52.23 ? C26 A1L24 401 A 1 HETATM 8 C C02 A1L24 . . . C 2 -50.462 39.154 14.631 1 29.32 ? C02 A1L24 401 A 1 HETATM 9 C C04 A1L24 . . . C 2 -50.763 36.96 14.103 1 32.08 ? C04 A1L24 401 A 1 HETATM 10 C C05 A1L24 . . . C 2 -49.954 36.61 15.169 1 27.33 ? C05 A1L24 401 A 1 HETATM 11 C C06 A1L24 . . . C 2 -49.403 37.595 15.967 1 30.61 ? C06 A1L24 401 A 1 HETATM 12 C C08 A1L24 . . . C 2 -50.503 34.598 16.476 1 34.77 ? C08 A1L24 401 A 1 HETATM 13 C C14 A1L24 . . . C 2 -51.875 32.168 19.891 1 35.18 ? C14 A1L24 401 A 1 HETATM 14 C C16 A1L24 . . . C 2 -51.595 30.252 18.427 1 37.1 ? C16 A1L24 401 A 1 HETATM 15 C C18 A1L24 . . . C 2 -52.681 29.929 20.67 1 39.76 ? C18 A1L24 401 A 1 HETATM 16 C C23 A1L24 . . . C 2 -54.383 27.27 21.314 1 49.65 ? C23 A1L24 401 A 1 HETATM 17 C C27 A1L24 . . . C 2 -55.89 26.34 19.508 1 61.66 ? C27 A1L24 401 A 1 HETATM 18 N N01 A1L24 . . . C 2 -49.688 38.853 15.671 1 30.33 ? N01 A1L24 401 A 1 HETATM 19 N N03 A1L24 . . . C 2 -51.007 38.236 13.851 1 30.03 ? N03 A1L24 401 A 1 HETATM 20 N N07 A1L24 . . . C 2 -49.662 35.23 15.476 1 28.6 ? N07 A1L24 401 A 1 HETATM 21 N N09 A1L24 . . . C 2 -50.185 33.229 16.759 1 35.89 ? N09 A1L24 401 A 1 HETATM 22 N N11 A1L24 . . . C 2 -51.323 35.899 13.294 1 28.75 ? N11 A1L24 401 A 1 HETATM 23 N N20 A1L24 . . . C 2 -52.378 28.517 20.59 1 38.7 ? N20 A1L24 401 A 1 HETATM 24 N N28 A1L24 . . . C 2 -56.394 27.279 18.661 1 67.03 ? N28 A1L24 401 A 1 HETATM 25 N N29 A1L24 . . . C 2 -57.658 26.926 18.339 1 64.58 ? N29 A1L24 401 A 1 HETATM 26 N N30 A1L24 . . . C 2 -57.931 25.804 18.963 1 69.24 ? N30 A1L24 401 A 1 HETATM 27 N N31 A1L24 . . . C 2 -56.867 25.41 19.694 1 65.14 ? N31 A1L24 401 A 1 HETATM 28 N N34 A1L24 . . . C 2 -50.754 40.549 14.355 1 27.52 ? N34 A1L24 401 A 1 HETATM 29 O O12 A1L24 . . . C 2 -51.41 35.176 17.01 1 33.23 ? O12 A1L24 401 A 1 HETATM 30 O O19 A1L24 . . . C 2 -53.367 30.379 21.538 1 39.21 ? O19 A1L24 401 A 1 HETATM 31 O O24 A1L24 . . . C 2 -52.117 25.541 22.498 1 44.69 ? O24 A1L24 401 A 1 HETATM 32 O O25 A1L24 . . . C 2 -51.075 26.35 20.763 1 42.16 ? O25 A1L24 401 A 1 HETATM 33 O O33 A1L24 . . . C 2 -48.685 37.295 16.879 1 31.07 ? O33 A1L24 401 A 1 HETATM 34 CL CL32 A1L24 . . . C 2 -50.421 30.419 15.947 1 45.08 ? CL32 A1L24 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #