data_9ITG # _model_server_result.job_id ERyDVInZJnN70z4141qcdA _model_server_result.datetime_utc '2025-04-15 21:32:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9itg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":805}' # _entry.id 9ITG # _exptl.entry_id 9ITG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 748.065 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9ITG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9ITG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 N N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 415 A CYS 415 1_555 A SG CYS 440 A CYS 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 B SG CYS 415 B CYS 415 1_555 B SG CYS 440 B CYS 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O11 3PE sing 86 n n P O12 3PE sing 87 n n P O13 3PE sing 88 n n P O14 3PE doub 89 n n N C12 3PE sing 90 n n N HN1 3PE sing 91 n n N HN2 3PE sing 92 n n O11 C1 3PE sing 93 n n O13 C11 3PE sing 94 n n C11 C12 3PE sing 95 n n C11 H111 3PE sing 96 n n C11 H112 3PE sing 97 n n C12 H121 3PE sing 98 n n C12 H122 3PE sing 99 n n C1 C2 3PE sing 100 n n C1 H11 3PE sing 101 n n C1 H12 3PE sing 102 n n C2 C3 3PE sing 103 n n C2 O21 3PE sing 104 n n C2 H2 3PE sing 105 n n C3 O31 3PE sing 106 n n C3 H31 3PE sing 107 n n C3 H32 3PE sing 108 n n O31 C31 3PE sing 109 n n O32 C31 3PE doub 110 n n C31 C32 3PE sing 111 n n C32 C33 3PE sing 112 n n C32 H321 3PE sing 113 n n C32 H322 3PE sing 114 n n C33 C34 3PE sing 115 n n C33 H331 3PE sing 116 n n C33 H332 3PE sing 117 n n C34 C35 3PE sing 118 n n C34 H341 3PE sing 119 n n C34 H342 3PE sing 120 n n C35 C36 3PE sing 121 n n C35 H351 3PE sing 122 n n C35 H352 3PE sing 123 n n C36 C37 3PE sing 124 n n C36 H361 3PE sing 125 n n C36 H362 3PE sing 126 n n C37 C38 3PE sing 127 n n C37 H371 3PE sing 128 n n C37 H372 3PE sing 129 n n C38 C39 3PE sing 130 n n C38 H381 3PE sing 131 n n C38 H382 3PE sing 132 n n C39 C3A 3PE sing 133 n n C39 H391 3PE sing 134 n n C39 H392 3PE sing 135 n n C3A C3B 3PE sing 136 n n C3A H3A1 3PE sing 137 n n C3A H3A2 3PE sing 138 n n C3B C3C 3PE sing 139 n n C3B H3B1 3PE sing 140 n n C3B H3B2 3PE sing 141 n n C3C C3D 3PE sing 142 n n C3C H3C1 3PE sing 143 n n C3C H3C2 3PE sing 144 n n C3D C3E 3PE sing 145 n n C3D H3D1 3PE sing 146 n n C3D H3D2 3PE sing 147 n n C3E C3F 3PE sing 148 n n C3E H3E1 3PE sing 149 n n C3E H3E2 3PE sing 150 n n C3F C3G 3PE sing 151 n n C3F H3F1 3PE sing 152 n n C3F H3F2 3PE sing 153 n n C3G C3H 3PE sing 154 n n C3G H3G1 3PE sing 155 n n C3G H3G2 3PE sing 156 n n C3H C3I 3PE sing 157 n n C3H H3H1 3PE sing 158 n n C3H H3H2 3PE sing 159 n n C3I H3I1 3PE sing 160 n n C3I H3I2 3PE sing 161 n n C3I H3I3 3PE sing 162 n n O21 C21 3PE sing 163 n n O22 C21 3PE doub 164 n n C21 C22 3PE sing 165 n n C22 C23 3PE sing 166 n n C22 H221 3PE sing 167 n n C22 H222 3PE sing 168 n n C23 C24 3PE sing 169 n n C23 H231 3PE sing 170 n n C23 H232 3PE sing 171 n n C24 C25 3PE sing 172 n n C24 H241 3PE sing 173 n n C24 H242 3PE sing 174 n n C25 C26 3PE sing 175 n n C25 H251 3PE sing 176 n n C25 H252 3PE sing 177 n n C26 C27 3PE sing 178 n n C26 H261 3PE sing 179 n n C26 H262 3PE sing 180 n n C27 C28 3PE sing 181 n n C27 H271 3PE sing 182 n n C27 H272 3PE sing 183 n n C28 C29 3PE sing 184 n n C28 H281 3PE sing 185 n n C28 H282 3PE sing 186 n n C29 C2A 3PE sing 187 n n C29 H291 3PE sing 188 n n C29 H292 3PE sing 189 n n C2A C2B 3PE sing 190 n n C2A H2A1 3PE sing 191 n n C2A H2A2 3PE sing 192 n n C2B C2C 3PE sing 193 n n C2B H2B1 3PE sing 194 n n C2B H2B2 3PE sing 195 n n C2C C2D 3PE sing 196 n n C2C H2C1 3PE sing 197 n n C2C H2C2 3PE sing 198 n n C2D C2E 3PE sing 199 n n C2D H2D1 3PE sing 200 n n C2D H2D2 3PE sing 201 n n C2E C2F 3PE sing 202 n n C2E H2E1 3PE sing 203 n n C2E H2E2 3PE sing 204 n n C2F C2G 3PE sing 205 n n C2F H2F1 3PE sing 206 n n C2F H2F2 3PE sing 207 n n C2G C2H 3PE sing 208 n n C2G H2G1 3PE sing 209 n n C2G H2G2 3PE sing 210 n n C2H C2I 3PE sing 211 n n C2H H2H1 3PE sing 212 n n C2H H2H2 3PE sing 213 n n C2I H2I1 3PE sing 214 n n C2I H2I2 3PE sing 215 n n C2I H2I3 3PE sing 216 n n O12 H1 3PE sing 217 n n # _atom_sites.entry_id 9ITG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 801 701 PO4 PO4 . D 3 IHP A 1 802 705 IHP IHP . E 4 CLR A 1 803 709 CLR CLR . F 5 3PE A 1 804 803 3PE 3PE . G 5 3PE A 1 805 804 3PE 3PE . H 6 Y01 A 1 806 805 Y01 Y01 . I 7 PLM A 1 807 806 PLM PLM . J 8 1T9 A 1 808 807 1T9 1T9 . K 2 PO4 B 1 801 701 PO4 PO4 . L 3 IHP B 1 802 705 IHP IHP . M 4 CLR B 1 803 709 CLR CLR . N 5 3PE B 1 804 803 3PE 3PE . O 5 3PE B 1 805 804 3PE 3PE . P 6 Y01 B 1 806 805 Y01 Y01 . Q 7 PLM B 1 807 806 PLM PLM . R 8 1T9 B 1 808 807 1T9 1T9 . S 9 HOH A 1 901 801 HOH HOH . S 9 HOH A 2 902 802 HOH HOH . S 9 HOH A 3 903 8 HOH HOH . S 9 HOH A 4 904 7 HOH HOH . T 9 HOH B 1 901 801 HOH HOH . T 9 HOH B 2 902 802 HOH HOH . T 9 HOH B 3 903 5 HOH HOH . T 9 HOH B 4 904 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . G 5 140.872 149.032 176.609 1 110.33 ? P 3PE 805 A 1 HETATM 2 N N 3PE . . . G 5 136.103 147.491 176.29 1 92.63 ? N 3PE 805 A 1 HETATM 3 O O11 3PE . . . G 5 142.055 148.825 175.544 1 97.98 ? O11 3PE 805 A 1 HETATM 4 O O12 3PE . . . G 5 141.001 147.963 177.658 1 95.6 ? O12 3PE 805 A 1 HETATM 5 O O13 3PE . . . G 5 139.562 148.705 175.741 1 95.96 ? O13 3PE 805 A 1 HETATM 6 O O14 3PE . . . G 5 140.832 150.482 177.007 1 95.57 ? O14 3PE 805 A 1 HETATM 7 C C11 3PE . . . G 5 138.273 148.641 176.405 1 92.46 ? C11 3PE 805 A 1 HETATM 8 C C12 3PE . . . G 5 137.282 147.915 175.537 1 94.25 ? C12 3PE 805 A 1 HETATM 9 C C1 3PE . . . G 5 142.288 149.842 174.536 1 91.24 ? C1 3PE 805 A 1 HETATM 10 C C2 3PE . . . G 5 142.926 149.197 173.329 1 94.93 ? C2 3PE 805 A 1 HETATM 11 C C3 3PE . . . G 5 144.194 148.44 173.651 1 95.62 ? C3 3PE 805 A 1 HETATM 12 O O31 3PE . . . G 5 145.206 149.379 174.074 1 96.22 ? O31 3PE 805 A 1 HETATM 13 O O32 3PE . . . G 5 147.2 149.13 173.119 1 94.78 ? O32 3PE 805 A 1 HETATM 14 C C31 3PE . . . G 5 146.133 149.677 173.17 1 96.37 ? C31 3PE 805 A 1 HETATM 15 C C32 3PE . . . G 5 145.681 150.782 172.264 1 94.61 ? C32 3PE 805 A 1 HETATM 16 C C33 3PE . . . G 5 146.618 151.056 171.131 1 92.39 ? C33 3PE 805 A 1 HETATM 17 C C34 3PE . . . G 5 146.85 149.839 170.251 1 91.01 ? C34 3PE 805 A 1 HETATM 18 C C35 3PE . . . G 5 145.59 149.112 169.854 1 89.74 ? C35 3PE 805 A 1 HETATM 19 C C36 3PE . . . G 5 145.835 147.872 169.034 1 88.91 ? C36 3PE 805 A 1 HETATM 20 C C37 3PE . . . G 5 144.62 147.352 168.313 1 89.63 ? C37 3PE 805 A 1 HETATM 21 C C38 3PE . . . G 5 143.984 148.356 167.393 1 94.68 ? C38 3PE 805 A 1 HETATM 22 C C39 3PE . . . G 5 143.422 147.768 166.128 1 92.43 ? C39 3PE 805 A 1 HETATM 23 C C3A 3PE . . . G 5 142.513 148.704 165.38 1 89.13 ? C3A 3PE 805 A 1 HETATM 24 C C3B 3PE . . . G 5 142.074 148.199 164.033 1 86.62 ? C3B 3PE 805 A 1 HETATM 25 C C3C 3PE . . . G 5 141.006 149.041 163.392 1 87.8 ? C3C 3PE 805 A 1 HETATM 26 C C3D 3PE . . . G 5 140.63 148.609 162.002 1 88.94 ? C3D 3PE 805 A 1 HETATM 27 C C3E 3PE . . . G 5 141.756 148.689 161.007 1 89.12 ? C3E 3PE 805 A 1 HETATM 28 C C3F 3PE . . . G 5 141.304 148.65 159.572 1 88.99 ? C3F 3PE 805 A 1 HETATM 29 C C3G 3PE . . . G 5 142.419 148.789 158.572 1 89.01 ? C3G 3PE 805 A 1 HETATM 30 C C3H 3PE . . . G 5 141.959 149.179 157.194 1 93.8 ? C3H 3PE 805 A 1 HETATM 31 C C3I 3PE . . . G 5 140.787 148.363 156.705 1 93.21 ? C3I 3PE 805 A 1 HETATM 32 O O21 3PE . . . G 5 141.98 148.272 172.731 1 99.11 ? O21 3PE 805 A 1 HETATM 33 O O22 3PE . . . G 5 139.979 149.242 172.512 1 89.23 ? O22 3PE 805 A 1 HETATM 34 C C21 3PE . . . G 5 140.973 148.787 172.011 1 93.51 ? C21 3PE 805 A 1 HETATM 35 C C22 3PE . . . G 5 141.246 148.722 170.536 1 91.37 ? C22 3PE 805 A 1 HETATM 36 C C23 3PE . . . G 5 140.237 147.917 169.789 1 92.53 ? C23 3PE 805 A 1 HETATM 37 C C24 3PE . . . G 5 140.588 147.759 168.324 1 88.18 ? C24 3PE 805 A 1 HETATM 38 C C25 3PE . . . G 5 139.639 146.871 167.567 1 86.4 ? C25 3PE 805 A 1 HETATM 39 C C26 3PE . . . G 5 140.006 146.666 166.121 1 89.28 ? C26 3PE 805 A 1 HETATM 40 C C27 3PE . . . G 5 139.344 145.48 165.471 1 90.48 ? C27 3PE 805 A 1 HETATM 41 C C28 3PE . . . G 5 137.961 145.746 164.937 1 89.92 ? C28 3PE 805 A 1 HETATM 42 C C29 3PE . . . G 5 137.036 146.422 165.915 1 88.86 ? C29 3PE 805 A 1 HETATM 43 C C2A 3PE . . . G 5 135.6 146.532 165.462 1 89.66 ? C2A 3PE 805 A 1 HETATM 44 C C2B 3PE . . . G 5 134.976 145.226 165.042 1 90.66 ? C2B 3PE 805 A 1 HETATM 45 C C2C 3PE . . . G 5 135.197 144.868 163.594 1 92.75 ? C2C 3PE 805 A 1 HETATM 46 C C2D 3PE . . . G 5 135.116 143.395 163.307 1 89.79 ? C2D 3PE 805 A 1 HETATM 47 C C2E 3PE . . . G 5 133.721 142.837 163.35 1 87.76 ? C2E 3PE 805 A 1 HETATM 48 C C2F 3PE . . . G 5 133.651 141.371 163.022 1 93.47 ? C2F 3PE 805 A 1 HETATM 49 C C2G 3PE . . . G 5 132.328 140.91 162.478 1 91.91 ? C2G 3PE 805 A 1 HETATM 50 C C2H 3PE . . . G 5 132.45 139.802 161.468 1 89.7 ? C2H 3PE 805 A 1 HETATM 51 C C2I 3PE . . . G 5 133.155 140.218 160.202 1 91.43 ? C2I 3PE 805 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 384 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 51 #