data_9IY0 # _model_server_result.job_id EmyZlUEHl5wIXHXfXXSPfA _model_server_result.datetime_utc '2024-10-18 05:19:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9iy0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 9IY0 # _exptl.entry_id 9IY0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.53 _cell.angle_gamma 90 _cell.entry_id 9IY0 _cell.length_a 37.089 _cell.length_b 103.062 _cell.length_c 52.044 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9IY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 94 L CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 139 L CYS 139 1_555 A SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 144 H CYS 144 1_555 B SG CYS 199 H CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc1 A OD1 ASN 1 L ASN 1 1_555 D MG MG . L MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc2 A OE2 GLU 87 L GLU 87 1_555 E MG MG . L MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc3 A OG1 THR 119 L THR 119 1_555 C MG MG . L MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc4 A OD2 ASP 189 L ASP 189 1_555 E MG MG . L MG 303 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc5 C MG MG . L MG 301 1_555 G O HOH . L HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc6 C MG MG . L MG 301 2_755 B OG SER 28 H SER 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? metalc ? metalc7 D MG MG . L MG 302 1_555 H O HOH . H HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc8 E MG MG . L MG 303 1_555 G O HOH . L HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? metalc ? metalc9 E MG MG . L MG 303 1_555 G O HOH . L HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc10 B O SER 189 H SER 189 1_555 F MG MG . H MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc11 B OG SER 194 H SER 194 1_555 F MG MG . H MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc12 F MG MG . H MG 301 1_555 H O HOH . H HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9IY0 _atom_sites.fract_transf_matrix[1][1] 0.026962 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000249 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009703 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG L 1 301 2 MG MG . D 3 MG L 1 302 3 MG MG . E 3 MG L 1 303 5 MG MG . F 3 MG H 1 301 1 MG MG . G 4 HOH L 1 401 36 HOH HOH . G 4 HOH L 2 402 122 HOH HOH . G 4 HOH L 3 403 8 HOH HOH . G 4 HOH L 4 404 194 HOH HOH . G 4 HOH L 5 405 19 HOH HOH . G 4 HOH L 6 406 57 HOH HOH . G 4 HOH L 7 407 92 HOH HOH . G 4 HOH L 8 408 23 HOH HOH . G 4 HOH L 9 409 89 HOH HOH . G 4 HOH L 10 410 4 HOH HOH . G 4 HOH L 11 411 41 HOH HOH . G 4 HOH L 12 412 68 HOH HOH . G 4 HOH L 13 413 16 HOH HOH . G 4 HOH L 14 414 6 HOH HOH . G 4 HOH L 15 415 78 HOH HOH . G 4 HOH L 16 416 20 HOH HOH . G 4 HOH L 17 417 196 HOH HOH . G 4 HOH L 18 418 63 HOH HOH . G 4 HOH L 19 419 17 HOH HOH . G 4 HOH L 20 420 46 HOH HOH . G 4 HOH L 21 421 203 HOH HOH . G 4 HOH L 22 422 40 HOH HOH . G 4 HOH L 23 423 2 HOH HOH . G 4 HOH L 24 424 9 HOH HOH . G 4 HOH L 25 425 90 HOH HOH . G 4 HOH L 26 426 48 HOH HOH . G 4 HOH L 27 427 25 HOH HOH . G 4 HOH L 28 428 12 HOH HOH . G 4 HOH L 29 429 151 HOH HOH . G 4 HOH L 30 430 123 HOH HOH . G 4 HOH L 31 431 70 HOH HOH . G 4 HOH L 32 432 55 HOH HOH . G 4 HOH L 33 433 73 HOH HOH . G 4 HOH L 34 434 53 HOH HOH . G 4 HOH L 35 435 62 HOH HOH . G 4 HOH L 36 436 101 HOH HOH . G 4 HOH L 37 437 61 HOH HOH . G 4 HOH L 38 438 37 HOH HOH . G 4 HOH L 39 439 95 HOH HOH . G 4 HOH L 40 440 144 HOH HOH . G 4 HOH L 41 441 115 HOH HOH . G 4 HOH L 42 442 169 HOH HOH . G 4 HOH L 43 443 24 HOH HOH . G 4 HOH L 44 444 177 HOH HOH . G 4 HOH L 45 445 135 HOH HOH . G 4 HOH L 46 446 149 HOH HOH . G 4 HOH L 47 447 178 HOH HOH . G 4 HOH L 48 448 176 HOH HOH . G 4 HOH L 49 449 190 HOH HOH . G 4 HOH L 50 450 38 HOH HOH . G 4 HOH L 51 451 33 HOH HOH . G 4 HOH L 52 452 15 HOH HOH . G 4 HOH L 53 453 139 HOH HOH . G 4 HOH L 54 454 136 HOH HOH . G 4 HOH L 55 455 105 HOH HOH . G 4 HOH L 56 456 59 HOH HOH . G 4 HOH L 57 457 80 HOH HOH . G 4 HOH L 58 458 52 HOH HOH . G 4 HOH L 59 459 186 HOH HOH . G 4 HOH L 60 460 47 HOH HOH . G 4 HOH L 61 461 14 HOH HOH . G 4 HOH L 62 462 128 HOH HOH . G 4 HOH L 63 463 113 HOH HOH . G 4 HOH L 64 464 168 HOH HOH . G 4 HOH L 65 465 165 HOH HOH . G 4 HOH L 66 466 125 HOH HOH . G 4 HOH L 67 467 180 HOH HOH . G 4 HOH L 68 468 152 HOH HOH . G 4 HOH L 69 469 26 HOH HOH . G 4 HOH L 70 470 166 HOH HOH . G 4 HOH L 71 471 146 HOH HOH . G 4 HOH L 72 472 183 HOH HOH . G 4 HOH L 73 473 226 HOH HOH . G 4 HOH L 74 474 216 HOH HOH . G 4 HOH L 75 475 192 HOH HOH . G 4 HOH L 76 476 193 HOH HOH . G 4 HOH L 77 477 213 HOH HOH . G 4 HOH L 78 478 91 HOH HOH . G 4 HOH L 79 479 175 HOH HOH . G 4 HOH L 80 480 172 HOH HOH . G 4 HOH L 81 481 83 HOH HOH . G 4 HOH L 82 482 159 HOH HOH . G 4 HOH L 83 483 155 HOH HOH . G 4 HOH L 84 484 198 HOH HOH . G 4 HOH L 85 485 210 HOH HOH . G 4 HOH L 86 486 138 HOH HOH . G 4 HOH L 87 487 111 HOH HOH . G 4 HOH L 88 488 208 HOH HOH . H 4 HOH H 1 401 220 HOH HOH . H 4 HOH H 2 402 214 HOH HOH . H 4 HOH H 3 403 69 HOH HOH . H 4 HOH H 4 404 173 HOH HOH . H 4 HOH H 5 405 204 HOH HOH . H 4 HOH H 6 406 163 HOH HOH . H 4 HOH H 7 407 229 HOH HOH . H 4 HOH H 8 408 150 HOH HOH . H 4 HOH H 9 409 148 HOH HOH . H 4 HOH H 10 410 60 HOH HOH . H 4 HOH H 11 411 10 HOH HOH . H 4 HOH H 12 412 44 HOH HOH . H 4 HOH H 13 413 18 HOH HOH . H 4 HOH H 14 414 7 HOH HOH . H 4 HOH H 15 415 81 HOH HOH . H 4 HOH H 16 416 50 HOH HOH . H 4 HOH H 17 417 74 HOH HOH . H 4 HOH H 18 418 200 HOH HOH . H 4 HOH H 19 419 42 HOH HOH . H 4 HOH H 20 420 118 HOH HOH . H 4 HOH H 21 421 108 HOH HOH . H 4 HOH H 22 422 174 HOH HOH . H 4 HOH H 23 423 96 HOH HOH . H 4 HOH H 24 424 32 HOH HOH . H 4 HOH H 25 425 35 HOH HOH . H 4 HOH H 26 426 185 HOH HOH . H 4 HOH H 27 427 84 HOH HOH . H 4 HOH H 28 428 206 HOH HOH . H 4 HOH H 29 429 49 HOH HOH . H 4 HOH H 30 430 129 HOH HOH . H 4 HOH H 31 431 43 HOH HOH . H 4 HOH H 32 432 1 HOH HOH . H 4 HOH H 33 433 54 HOH HOH . H 4 HOH H 34 434 188 HOH HOH . H 4 HOH H 35 435 131 HOH HOH . H 4 HOH H 36 436 119 HOH HOH . H 4 HOH H 37 437 99 HOH HOH . H 4 HOH H 38 438 127 HOH HOH . H 4 HOH H 39 439 110 HOH HOH . H 4 HOH H 40 440 103 HOH HOH . H 4 HOH H 41 441 31 HOH HOH . H 4 HOH H 42 442 5 HOH HOH . H 4 HOH H 43 443 124 HOH HOH . H 4 HOH H 44 444 58 HOH HOH . H 4 HOH H 45 445 142 HOH HOH . H 4 HOH H 46 446 102 HOH HOH . H 4 HOH H 47 447 39 HOH HOH . H 4 HOH H 48 448 162 HOH HOH . H 4 HOH H 49 449 51 HOH HOH . H 4 HOH H 50 450 158 HOH HOH . H 4 HOH H 51 451 98 HOH HOH . H 4 HOH H 52 452 170 HOH HOH . H 4 HOH H 53 453 218 HOH HOH . H 4 HOH H 54 454 11 HOH HOH . H 4 HOH H 55 455 130 HOH HOH . H 4 HOH H 56 456 143 HOH HOH . H 4 HOH H 57 457 154 HOH HOH . H 4 HOH H 58 458 71 HOH HOH . H 4 HOH H 59 459 225 HOH HOH . H 4 HOH H 60 460 107 HOH HOH . H 4 HOH H 61 461 22 HOH HOH . H 4 HOH H 62 462 3 HOH HOH . H 4 HOH H 63 463 121 HOH HOH . H 4 HOH H 64 464 13 HOH HOH . H 4 HOH H 65 465 184 HOH HOH . H 4 HOH H 66 466 104 HOH HOH . H 4 HOH H 67 467 64 HOH HOH . H 4 HOH H 68 468 34 HOH HOH . H 4 HOH H 69 469 86 HOH HOH . H 4 HOH H 70 470 27 HOH HOH . H 4 HOH H 71 471 29 HOH HOH . H 4 HOH H 72 472 209 HOH HOH . H 4 HOH H 73 473 106 HOH HOH . H 4 HOH H 74 474 85 HOH HOH . H 4 HOH H 75 475 120 HOH HOH . H 4 HOH H 76 476 94 HOH HOH . H 4 HOH H 77 477 161 HOH HOH . H 4 HOH H 78 478 21 HOH HOH . H 4 HOH H 79 479 77 HOH HOH . H 4 HOH H 80 480 145 HOH HOH . H 4 HOH H 81 481 45 HOH HOH . H 4 HOH H 82 482 133 HOH HOH . H 4 HOH H 83 483 117 HOH HOH . H 4 HOH H 84 484 72 HOH HOH . H 4 HOH H 85 485 65 HOH HOH . H 4 HOH H 86 486 88 HOH HOH . H 4 HOH H 87 487 171 HOH HOH . H 4 HOH H 88 488 221 HOH HOH . H 4 HOH H 89 489 126 HOH HOH . H 4 HOH H 90 490 76 HOH HOH . H 4 HOH H 91 491 87 HOH HOH . H 4 HOH H 92 492 224 HOH HOH . H 4 HOH H 93 493 112 HOH HOH . H 4 HOH H 94 494 179 HOH HOH . H 4 HOH H 95 495 93 HOH HOH . H 4 HOH H 96 496 30 HOH HOH . H 4 HOH H 97 497 66 HOH HOH . H 4 HOH H 98 498 199 HOH HOH . H 4 HOH H 99 499 109 HOH HOH . H 4 HOH H 100 500 97 HOH HOH . H 4 HOH H 101 501 153 HOH HOH . H 4 HOH H 102 502 202 HOH HOH . H 4 HOH H 103 503 82 HOH HOH . H 4 HOH H 104 504 100 HOH HOH . H 4 HOH H 105 505 56 HOH HOH . H 4 HOH H 106 506 140 HOH HOH . H 4 HOH H 107 507 67 HOH HOH . H 4 HOH H 108 508 197 HOH HOH . H 4 HOH H 109 509 187 HOH HOH . H 4 HOH H 110 510 222 HOH HOH . H 4 HOH H 111 511 157 HOH HOH . H 4 HOH H 112 512 116 HOH HOH . H 4 HOH H 113 513 28 HOH HOH . H 4 HOH H 114 514 211 HOH HOH . H 4 HOH H 115 515 79 HOH HOH . H 4 HOH H 116 516 181 HOH HOH . H 4 HOH H 117 517 182 HOH HOH . H 4 HOH H 118 518 132 HOH HOH . H 4 HOH H 119 519 228 HOH HOH . H 4 HOH H 120 520 201 HOH HOH . H 4 HOH H 121 521 212 HOH HOH . H 4 HOH H 122 522 164 HOH HOH . H 4 HOH H 123 523 189 HOH HOH . H 4 HOH H 124 524 205 HOH HOH . H 4 HOH H 125 525 207 HOH HOH . H 4 HOH H 126 526 219 HOH HOH . H 4 HOH H 127 527 223 HOH HOH . H 4 HOH H 128 528 195 HOH HOH . H 4 HOH H 129 529 147 HOH HOH . H 4 HOH H 130 530 156 HOH HOH . H 4 HOH H 131 531 231 HOH HOH . H 4 HOH H 132 532 114 HOH HOH . H 4 HOH H 133 533 167 HOH HOH . H 4 HOH H 134 534 227 HOH HOH . H 4 HOH H 135 535 191 HOH HOH . H 4 HOH H 136 536 230 HOH HOH . H 4 HOH H 137 537 217 HOH HOH . H 4 HOH H 138 538 232 HOH HOH . H 4 HOH H 139 539 141 HOH HOH . H 4 HOH H 140 540 134 HOH HOH . H 4 HOH H 141 541 215 HOH HOH . H 4 HOH H 142 542 160 HOH HOH . H 4 HOH H 143 543 75 HOH HOH . H 4 HOH H 144 544 137 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 58.941 _atom_site.Cartn_y 22.243 _atom_site.Cartn_z 13.96 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #