data_9J2Y # _model_server_result.job_id izP5Q3TuRj-77wwyrlsq1Q _model_server_result.datetime_utc '2025-07-15 04:18:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9j2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 9J2Y # _exptl.entry_id 9J2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.92 _cell.angle_gamma 90 _cell.entry_id 9J2Y _cell.length_a 214.666 _cell.length_b 47.207 _cell.length_c 87.243 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9J2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 234 A HIS 390 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc2 A SG CYS 240 A CYS 396 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc3 A SG CYS 241 A CYS 397 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc4 A SG CYS 248 A CYS 404 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc5 B NE2 HIS 234 B HIS 390 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc6 B SG CYS 240 B CYS 396 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc7 B SG CYS 241 B CYS 397 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc8 B SG CYS 248 B CYS 404 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9J2Y _atom_sites.fract_transf_matrix[1][1] 0.004658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002066 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 2 ZN ZN . D 3 JUJ A 1 602 1 JUJ DRG . E 2 ZN B 1 601 1 ZN ZN . F 3 JUJ B 1 602 2 JUJ DRG . G 4 HOH A 1 701 55 HOH HOH . G 4 HOH A 2 702 40 HOH HOH . G 4 HOH A 3 703 21 HOH HOH . G 4 HOH A 4 704 28 HOH HOH . G 4 HOH A 5 705 11 HOH HOH . G 4 HOH A 6 706 53 HOH HOH . G 4 HOH A 7 707 13 HOH HOH . G 4 HOH A 8 708 62 HOH HOH . G 4 HOH A 9 709 6 HOH HOH . G 4 HOH A 10 710 3 HOH HOH . G 4 HOH A 11 711 63 HOH HOH . G 4 HOH A 12 712 37 HOH HOH . G 4 HOH A 13 713 47 HOH HOH . G 4 HOH A 14 714 7 HOH HOH . G 4 HOH A 15 715 38 HOH HOH . G 4 HOH A 16 716 27 HOH HOH . G 4 HOH A 17 717 31 HOH HOH . G 4 HOH A 18 718 42 HOH HOH . G 4 HOH A 19 719 51 HOH HOH . G 4 HOH A 20 720 41 HOH HOH . G 4 HOH A 21 721 60 HOH HOH . G 4 HOH A 22 722 36 HOH HOH . G 4 HOH A 23 723 1 HOH HOH . G 4 HOH A 24 724 22 HOH HOH . G 4 HOH A 25 725 58 HOH HOH . H 4 HOH B 1 701 56 HOH HOH . H 4 HOH B 2 702 5 HOH HOH . H 4 HOH B 3 703 2 HOH HOH . H 4 HOH B 4 704 14 HOH HOH . H 4 HOH B 5 705 39 HOH HOH . H 4 HOH B 6 706 20 HOH HOH . H 4 HOH B 7 707 19 HOH HOH . H 4 HOH B 8 708 16 HOH HOH . H 4 HOH B 9 709 54 HOH HOH . H 4 HOH B 10 710 25 HOH HOH . H 4 HOH B 11 711 12 HOH HOH . H 4 HOH B 12 712 61 HOH HOH . H 4 HOH B 13 713 24 HOH HOH . H 4 HOH B 14 714 10 HOH HOH . H 4 HOH B 15 715 26 HOH HOH . H 4 HOH B 16 716 52 HOH HOH . H 4 HOH B 17 717 32 HOH HOH . H 4 HOH B 18 718 44 HOH HOH . H 4 HOH B 19 719 35 HOH HOH . H 4 HOH B 20 720 8 HOH HOH . H 4 HOH B 21 721 49 HOH HOH . H 4 HOH B 22 722 17 HOH HOH . H 4 HOH B 23 723 18 HOH HOH . H 4 HOH B 24 724 4 HOH HOH . H 4 HOH B 25 725 33 HOH HOH . H 4 HOH B 26 726 34 HOH HOH . H 4 HOH B 27 727 50 HOH HOH . H 4 HOH B 28 728 23 HOH HOH . H 4 HOH B 29 729 43 HOH HOH . H 4 HOH B 30 730 46 HOH HOH . H 4 HOH B 31 731 48 HOH HOH . H 4 HOH B 32 732 29 HOH HOH . H 4 HOH B 33 733 9 HOH HOH . H 4 HOH B 34 734 57 HOH HOH . H 4 HOH B 35 735 45 HOH HOH . H 4 HOH B 36 736 15 HOH HOH . H 4 HOH B 37 737 30 HOH HOH . H 4 HOH B 38 738 59 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -62.979 _atom_site.Cartn_y 14.632 _atom_site.Cartn_z 50.095 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #