data_9J2Y # _model_server_result.job_id Hmsl8wBt4uImMJwlovT8mQ _model_server_result.datetime_utc '2025-07-15 04:34:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9j2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 9J2Y # _exptl.entry_id 9J2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 391.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[9-(6-aminopyridin-3-yl)-6,7-dichloro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.92 _cell.angle_gamma 90 _cell.entry_id 9J2Y _cell.length_a 214.666 _cell.length_b 47.207 _cell.length_c 87.243 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9J2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 234 A HIS 390 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc2 A SG CYS 240 A CYS 396 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc3 A SG CYS 241 A CYS 397 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc4 A SG CYS 248 A CYS 404 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc5 B NE2 HIS 234 B HIS 390 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc6 B SG CYS 240 B CYS 396 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc7 B SG CYS 241 B CYS 397 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc8 B SG CYS 248 B CYS 404 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? # _chem_comp.formula 'C18 H16 Cl2 N4 O2' _chem_comp.formula_weight 391.251 _chem_comp.id JUJ _chem_comp.mon_nstd_flag . _chem_comp.name 1-[9-(6-aminopyridin-3-yl)-6,7-dichloro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O04 C03 JUJ doub 173 n n C25 C26 JUJ doub 174 n y C25 C23 JUJ sing 175 n y C26 C20 JUJ sing 176 n y C03 C02 JUJ sing 177 n n C03 N05 JUJ sing 178 n n C02 O01 JUJ sing 179 n n C06 N05 JUJ sing 180 n n C06 C07 JUJ sing 181 n n C23 N24 JUJ sing 182 n n C23 N22 JUJ doub 183 n y N05 C13 JUJ sing 184 n n C20 C19 JUJ sing 185 n n C20 C21 JUJ doub 186 n y C07 C11 JUJ doub 187 n y C07 C08 JUJ sing 188 n y C12 C11 JUJ sing 189 n n C12 C13 JUJ sing 190 n n C19 C08 JUJ doub 191 n y C19 C18 JUJ sing 192 n y C11 N10 JUJ sing 193 n y C08 C09 JUJ sing 194 n y C18 C16 JUJ doub 195 n y C09 N10 JUJ sing 196 n y C09 C14 JUJ doub 197 n y C16 C14 JUJ sing 198 n y C16 CL1 JUJ sing 199 n n C14 CL2 JUJ sing 200 n n N22 C21 JUJ sing 201 n y C13 H1 JUJ sing 202 n n C13 H2 JUJ sing 203 n n C21 H3 JUJ sing 204 n n C26 H4 JUJ sing 205 n n O01 H5 JUJ sing 206 n n C02 H6 JUJ sing 207 n n C02 H7 JUJ sing 208 n n C06 H8 JUJ sing 209 n n C06 H9 JUJ sing 210 n n N10 H10 JUJ sing 211 n n C12 H11 JUJ sing 212 n n C12 H12 JUJ sing 213 n n C18 H13 JUJ sing 214 n n N24 H14 JUJ sing 215 n n N24 H15 JUJ sing 216 n n C25 H16 JUJ sing 217 n n # _atom_sites.entry_id 9J2Y _atom_sites.fract_transf_matrix[1][1] 0.004658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002066 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 2 ZN ZN . D 3 JUJ A 1 602 1 JUJ DRG . E 2 ZN B 1 601 1 ZN ZN . F 3 JUJ B 1 602 2 JUJ DRG . G 4 HOH A 1 701 55 HOH HOH . G 4 HOH A 2 702 40 HOH HOH . G 4 HOH A 3 703 21 HOH HOH . G 4 HOH A 4 704 28 HOH HOH . G 4 HOH A 5 705 11 HOH HOH . G 4 HOH A 6 706 53 HOH HOH . G 4 HOH A 7 707 13 HOH HOH . G 4 HOH A 8 708 62 HOH HOH . G 4 HOH A 9 709 6 HOH HOH . G 4 HOH A 10 710 3 HOH HOH . G 4 HOH A 11 711 63 HOH HOH . G 4 HOH A 12 712 37 HOH HOH . G 4 HOH A 13 713 47 HOH HOH . G 4 HOH A 14 714 7 HOH HOH . G 4 HOH A 15 715 38 HOH HOH . G 4 HOH A 16 716 27 HOH HOH . G 4 HOH A 17 717 31 HOH HOH . G 4 HOH A 18 718 42 HOH HOH . G 4 HOH A 19 719 51 HOH HOH . G 4 HOH A 20 720 41 HOH HOH . G 4 HOH A 21 721 60 HOH HOH . G 4 HOH A 22 722 36 HOH HOH . G 4 HOH A 23 723 1 HOH HOH . G 4 HOH A 24 724 22 HOH HOH . G 4 HOH A 25 725 58 HOH HOH . H 4 HOH B 1 701 56 HOH HOH . H 4 HOH B 2 702 5 HOH HOH . H 4 HOH B 3 703 2 HOH HOH . H 4 HOH B 4 704 14 HOH HOH . H 4 HOH B 5 705 39 HOH HOH . H 4 HOH B 6 706 20 HOH HOH . H 4 HOH B 7 707 19 HOH HOH . H 4 HOH B 8 708 16 HOH HOH . H 4 HOH B 9 709 54 HOH HOH . H 4 HOH B 10 710 25 HOH HOH . H 4 HOH B 11 711 12 HOH HOH . H 4 HOH B 12 712 61 HOH HOH . H 4 HOH B 13 713 24 HOH HOH . H 4 HOH B 14 714 10 HOH HOH . H 4 HOH B 15 715 26 HOH HOH . H 4 HOH B 16 716 52 HOH HOH . H 4 HOH B 17 717 32 HOH HOH . H 4 HOH B 18 718 44 HOH HOH . H 4 HOH B 19 719 35 HOH HOH . H 4 HOH B 20 720 8 HOH HOH . H 4 HOH B 21 721 49 HOH HOH . H 4 HOH B 22 722 17 HOH HOH . H 4 HOH B 23 723 18 HOH HOH . H 4 HOH B 24 724 4 HOH HOH . H 4 HOH B 25 725 33 HOH HOH . H 4 HOH B 26 726 34 HOH HOH . H 4 HOH B 27 727 50 HOH HOH . H 4 HOH B 28 728 23 HOH HOH . H 4 HOH B 29 729 43 HOH HOH . H 4 HOH B 30 730 46 HOH HOH . H 4 HOH B 31 731 48 HOH HOH . H 4 HOH B 32 732 29 HOH HOH . H 4 HOH B 33 733 9 HOH HOH . H 4 HOH B 34 734 57 HOH HOH . H 4 HOH B 35 735 45 HOH HOH . H 4 HOH B 36 736 15 HOH HOH . H 4 HOH B 37 737 30 HOH HOH . H 4 HOH B 38 738 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 JUJ . . . D 3 -45.105 18.859 17.911 1 63.91 ? C13 JUJ 602 A 1 HETATM 2 C C20 JUJ . . . D 3 -44.536 24.6 18.4 1 74.44 ? C20 JUJ 602 A 1 HETATM 3 C C21 JUJ . . . D 3 -43.472 25.432 18.09 1 74.47 ? C21 JUJ 602 A 1 HETATM 4 C C26 JUJ . . . D 3 -45.552 24.482 17.459 1 67.84 ? C26 JUJ 602 A 1 HETATM 5 O O01 JUJ . . . D 3 -41.73 18.108 15.379 1 83.16 ? O01 JUJ 602 A 1 HETATM 6 C C02 JUJ . . . D 3 -42.848 18.19 16.232 1 75.2 ? C02 JUJ 602 A 1 HETATM 7 C C03 JUJ . . . D 3 -43.216 19.643 16.505 1 77.02 ? C03 JUJ 602 A 1 HETATM 8 O O04 JUJ . . . D 3 -42.521 20.536 16.021 1 70.27 ? O04 JUJ 602 A 1 HETATM 9 N N05 JUJ . . . D 3 -44.292 19.905 17.288 1 68.59 ? N05 JUJ 602 A 1 HETATM 10 C C06 JUJ . . . D 3 -44.725 21.272 17.607 1 62.58 ? C06 JUJ 602 A 1 HETATM 11 C C07 JUJ . . . D 3 -44.773 21.379 19.091 1 61.84 ? C07 JUJ 602 A 1 HETATM 12 C C08 JUJ . . . D 3 -44.711 22.534 19.947 1 63.22 ? C08 JUJ 602 A 1 HETATM 13 C C09 JUJ . . . D 3 -44.774 22.045 21.269 1 61.82 ? C09 JUJ 602 A 1 HETATM 14 N N10 JUJ . . . D 3 -44.863 20.672 21.217 1 63.28 ? N10 JUJ 602 A 1 HETATM 15 C C11 JUJ . . . D 3 -44.861 20.28 19.896 1 60.72 ? C11 JUJ 602 A 1 HETATM 16 C C12 JUJ . . . D 3 -44.931 18.866 19.433 1 57.63 ? C12 JUJ 602 A 1 HETATM 17 C C14 JUJ . . . D 3 -44.741 22.923 22.345 1 66.58 ? C14 JUJ 602 A 1 HETATM 18 CL CL2 JUJ . . . D 3 -44.814 22.327 23.961 1 75.3 ? CL2 JUJ 602 A 1 HETATM 19 C C16 JUJ . . . D 3 -44.641 24.267 22.095 1 68.64 ? C16 JUJ 602 A 1 HETATM 20 CL CL1 JUJ . . . D 3 -44.581 25.387 23.407 1 82.41 ? CL1 JUJ 602 A 1 HETATM 21 C C18 JUJ . . . D 3 -44.574 24.756 20.821 1 70.07 ? C18 JUJ 602 A 1 HETATM 22 C C19 JUJ . . . D 3 -44.617 23.923 19.719 1 66.6 ? C19 JUJ 602 A 1 HETATM 23 N N22 JUJ . . . D 3 -43.354 26.089 16.927 1 76.87 ? N22 JUJ 602 A 1 HETATM 24 C C23 JUJ . . . D 3 -44.341 25.951 16.01 1 79.9 ? C23 JUJ 602 A 1 HETATM 25 N N24 JUJ . . . D 3 -44.192 26.62 14.86 1 76.87 ? N24 JUJ 602 A 1 HETATM 26 C C25 JUJ . . . D 3 -45.466 25.142 16.257 1 75.04 ? C25 JUJ 602 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #